RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 UBE2KP61086 200 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 IGFBP7Q16270 282 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 ANKRD55Q3KP44 614 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 SLC25A24Q6NUK1 477 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 ZNF488Q96MN9 340 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 NECAP2Q9NVZ3 263 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 C1orf123Q9NWV4 160 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 ANXA10Q9UJ72 324 aa13.32□□□□□ -0.28
LMNB1-203ENST00000460265 TRAV39A0A0B4J263 110 aa13.31□□□□□ -0.28
LMNB1-203ENST00000460265 ETV2O00321 342 aaPredicted RBP13.31□□□□□ -0.28
LMNB1-203ENST00000460265 SNCAP37840 140 aa13.31□□□□□ -0.28
LMNB1-203ENST00000460265 UBE2NP61088 152 aaKnown RBP13.31□□□□□ -0.28
LMNB1-203ENST00000460265 HIST3H3Q16695 136 aa13.31□□□□□ -0.28
LMNB1-203ENST00000460265 LHFPL2Q6ZUX7 228 aa13.31□□□□□ -0.28
LMNB1-203ENST00000460265 C5orf24Q7Z6I8 188 aa13.31□□□□□ -0.28
LMNB1-203ENST00000460265 GGNQ86UU5 652 aa13.31□□□□□ -0.28
LMNB1-203ENST00000460265 OR10C1Q96KK4 312 aa13.31□□□□□ -0.28
LMNB1-203ENST00000460265 ANKRD30BLA7E2S9 258 aa13.31□□□□□ -0.28
LMNB1-203ENST00000460265 K7EPK0 472 aa13.31□□□□□ -0.28
LMNB1-203ENST00000460265 PET100P0DJ07 73 aa13.31□□□□□ -0.28
LMNB1-203ENST00000460265 FPR2P25090 351 aa13.31□□□□□ -0.28
LMNB1-203ENST00000460265 FAM71E2Q8N5Q1 922 aa13.31□□□□□ -0.28
LMNB1-203ENST00000460265 OR10J5Q8NHC4 309 aa13.31□□□□□ -0.28
LMNB1-203ENST00000460265 NOL4LQ96MY1 436 aaPredicted RBP13.31□□□□□ -0.28
LMNB1-203ENST00000460265 SPAARA0A1B0GVQ0 90 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 ZNF716A6NP11 495 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 CST4P01036 141 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 EPHA1P21709 976 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 HOXC12P31275 282 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 FUT6P51993 359 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 KCNMB1Q16558 191 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 ZNF664Q8N3J9 261 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 DEFB124Q8NES8 71 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 DKK1O94907 266 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 RPUSD3Q6P087 351 aaKnown RBP13.3□□□□□ -0.28
LMNB1-203ENST00000460265 CPEB3Q8NE35 698 aaKnown RBP13.3□□□□□ -0.28
LMNB1-203ENST00000460265 SYT3Q9BQG1 590 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 STARD10Q9Y365 291 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 COL4A2P08572 1712 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 TRBV6-7A0A0A0MS04 114 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 TAAR5O14804 337 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 SYNGR3O43761 229 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 CD200P41217 278 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 PRDX4Q13162 271 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 CALHM1Q8IU99 346 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 LUZP4Q9P127 313 aa13.3□□□□□ -0.28
LMNB1-203ENST00000460265 FOXD3Q9UJU5 478 aaPredicted RBP13.3□□□□□ -0.28
LMNB1-203ENST00000460265 TGIF2-C20orf24A0A0A6YYL0 155 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 MKRN2OSH3BPM6 223 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 IL2RAP01589 272 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 CXCL1P09341 107 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 TRGC1P0CF51 173 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 FHITP49789 147 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 FAM3AP98173 230 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 OR11L1Q8NGX0 322 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 PSMF1Q92530 271 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 SLC2A8Q9NY64 477 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 HSD17B6O14756 317 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 SCAF4O95104 1147 aaKnown RBP13.29□□□□□ -0.28
LMNB1-203ENST00000460265 CNOT4O95628 575 aaKnown RBP13.29□□□□□ -0.28
LMNB1-203ENST00000460265 GRPP07492 148 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 CA6P23280 308 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 TRIP6Q15654 476 aaKnown RBP13.29□□□□□ -0.28
LMNB1-203ENST00000460265 FBXW12Q6X9E4 464 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 C17orf78Q8N4C9 275 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 Q8WTZ3 238 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 AQP10Q96PS8 301 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 RIMS4Q9H426 269 aaPredicted RBP13.29□□□□□ -0.28
LMNB1-203ENST00000460265 M0R143 59 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 JTBO76095 146 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 TK1P04183 234 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 CYC1P08574 325 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 OR5AC1P0C628 307 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 MPZP25189 248 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 THNSL2Q86YJ6 484 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 SNX22Q96L94 193 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 C2orf50Q96LR7 162 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 C1orf147Q96MC9 270 aaPredicted RBP13.29□□□□□ -0.28
LMNB1-203ENST00000460265 PRSS50Q9UI38 385 aa13.29□□□□□ -0.28
LMNB1-203ENST00000460265 ZNF107Q9UII5 783 aaPredicted RBP13.29□□□□□ -0.28
LMNB1-203ENST00000460265 LYZL6O75951 148 aa13.28□□□□□ -0.28
LMNB1-203ENST00000460265 NEURL1O76050 574 aa13.28□□□□□ -0.28
LMNB1-203ENST00000460265 RPL12P30050 165 aaKnown RBP13.28□□□□□ -0.28
LMNB1-203ENST00000460265 B3GALT5-AS1P59052 145 aa13.28□□□□□ -0.28
LMNB1-203ENST00000460265 CXorf67Q86X51 503 aaPredicted RBP13.28□□□□□ -0.28
LMNB1-203ENST00000460265 ZNF695Q8IW36 515 aa13.28□□□□□ -0.28
LMNB1-203ENST00000460265 HSD17B11Q8NBQ5 300 aa13.28□□□□□ -0.28
LMNB1-203ENST00000460265 EXTL1Q92935 676 aa13.28□□□□□ -0.28
LMNB1-203ENST00000460265 MRPL24Q96A35 216 aaKnown RBP13.28□□□□□ -0.28
LMNB1-203ENST00000460265 MUCL1Q96DR8 90 aa13.28□□□□□ -0.28
LMNB1-203ENST00000460265 CDH20Q9HBT6 801 aa13.28□□□□□ -0.28
LMNB1-203ENST00000460265 C19orf12Q9NSK7 152 aa13.28□□□□□ -0.28
LMNB1-203ENST00000460265 KLF13Q9Y2Y9 288 aaPredicted RBP13.28□□□□□ -0.28
LMNB1-203ENST00000460265 TMED3Q9Y3Q3 217 aa13.28□□□□□ -0.28
LMNB1-203ENST00000460265 C1QL1O75973 258 aa13.28□□□□□ -0.28
LMNB1-203ENST00000460265 HNF4GQ14541 408 aa13.28□□□□□ -0.28
LMNB1-203ENST00000460265 MAGT1Q9H0U3 335 aa13.28□□□□□ -0.28
LMNB1-203ENST00000460265 FBXL17Q9UF56 701 aa13.28□□□□□ -0.28
LMNB1-203ENST00000460265 KCNS2Q9ULS6 477 aa13.28□□□□□ -0.28
LMNB1-203ENST00000460265 IGKV1-27A0A075B6S5 117 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms