RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 HTR3BO95264 441 aa16.94■□□□□ 0.3
CPNE1-220ENST00000458038 IL3RAP26951 378 aa16.94■□□□□ 0.3
CPNE1-220ENST00000458038 CD1BP29016 333 aa16.94■□□□□ 0.3
CPNE1-220ENST00000458038 CDX1P47902 265 aaPredicted RBP16.94■□□□□ 0.3
CPNE1-220ENST00000458038 FOXE3Q13461 319 aa16.94■□□□□ 0.3
CPNE1-220ENST00000458038 LPCAT4Q643R3 524 aa16.94■□□□□ 0.3
CPNE1-220ENST00000458038 Q8N6K4 173 aa16.94■□□□□ 0.3
CPNE1-220ENST00000458038 RNF152Q8N8N0 203 aa16.94■□□□□ 0.3
CPNE1-220ENST00000458038 OR8H1Q8NGG4 311 aa16.94■□□□□ 0.3
CPNE1-220ENST00000458038 OR8U1Q8NH10 309 aa16.94■□□□□ 0.3
CPNE1-220ENST00000458038 RAX2Q96IS3 184 aa16.94■□□□□ 0.3
CPNE1-220ENST00000458038 JAM3Q9BX67 310 aa16.94■□□□□ 0.3
CPNE1-220ENST00000458038 FAM192AQ9GZU8 254 aa16.94■□□□□ 0.3
CPNE1-220ENST00000458038 METTL9Q9H1A3 318 aa16.94■□□□□ 0.3
CPNE1-220ENST00000458038 ST3GAL6Q9Y274 331 aa16.94■□□□□ 0.3
CPNE1-220ENST00000458038 GMPPBQ9Y5P6 360 aa16.94■□□□□ 0.3
CPNE1-220ENST00000458038 SIRT4Q9Y6E7 314 aaPredicted RBP16.94■□□□□ 0.3
CPNE1-220ENST00000458038 TMEM30CPA0ZSE6 113 aa16.93■□□□□ 0.3
CPNE1-220ENST00000458038 RRP9O43818 475 aaKnown RBP16.93■□□□□ 0.3
CPNE1-220ENST00000458038 OR7C1O76099 320 aaPredicted RBP16.93■□□□□ 0.3
CPNE1-220ENST00000458038 CSTBP04080 98 aaKnown RBP16.93■□□□□ 0.3
CPNE1-220ENST00000458038 ELANEP08246 267 aa16.93■□□□□ 0.3
CPNE1-220ENST00000458038 GABRB1P18505 474 aa16.93■□□□□ 0.3
CPNE1-220ENST00000458038 GPR12P47775 334 aa16.93■□□□□ 0.3
CPNE1-220ENST00000458038 GPR50Q13585 617 aa16.93■□□□□ 0.3
CPNE1-220ENST00000458038 KIR2DS1Q14954 304 aa16.93■□□□□ 0.3
CPNE1-220ENST00000458038 ZIK1Q3SY52 487 aaPredicted RBP16.93■□□□□ 0.3
CPNE1-220ENST00000458038 OR5M8Q8NGP6 311 aa16.93■□□□□ 0.3
CPNE1-220ENST00000458038 OR10K1Q8NGX5 313 aa16.93■□□□□ 0.3
CPNE1-220ENST00000458038 RHOXF1Q8NHV9 184 aa16.93■□□□□ 0.3
CPNE1-220ENST00000458038 GPR148Q8TDV2 347 aa16.93■□□□□ 0.3
CPNE1-220ENST00000458038 S100A13Q99584 98 aa16.93■□□□□ 0.3
CPNE1-220ENST00000458038 DCLRE1BQ9H816 532 aa16.93■□□□□ 0.3
CPNE1-220ENST00000458038 RAB9BQ9NP90 201 aa16.93■□□□□ 0.3
CPNE1-220ENST00000458038 MRPS18AQ9NVS2 196 aaKnown RBP16.93■□□□□ 0.3
CPNE1-220ENST00000458038 E9PI62 339 aa16.92■□□□□ 0.3
CPNE1-220ENST00000458038 TXNL1O43396 289 aa16.92■□□□□ 0.3
CPNE1-220ENST00000458038 ORC5O43913 435 aa16.92■□□□□ 0.3
CPNE1-220ENST00000458038 RBM11P57052 281 aaKnown RBP16.92■□□□□ 0.3
CPNE1-220ENST00000458038 CCDC58Q4VC31 144 aa16.92■□□□□ 0.3
CPNE1-220ENST00000458038 C9orf66Q5T8R8 295 aa16.92■□□□□ 0.3
CPNE1-220ENST00000458038 Q8N9W7 124 aa16.92■□□□□ 0.3
CPNE1-220ENST00000458038 OR52N1Q8NH53 320 aa16.92■□□□□ 0.3
CPNE1-220ENST00000458038 TFAP2CQ92754 450 aa16.92■□□□□ 0.3
CPNE1-220ENST00000458038 ARL11Q969Q4 196 aa16.92■□□□□ 0.3
CPNE1-220ENST00000458038 TMEM138Q9NPI0 162 aa16.92■□□□□ 0.3
CPNE1-220ENST00000458038 RPL36Q9Y3U8 105 aaKnown RBP16.92■□□□□ 0.3
CPNE1-220ENST00000458038 STAB2Q8WWQ8 2551 aa16.92■□□□□ 0.3
CPNE1-220ENST00000458038 SORL1Q92673 2214 aa16.92■□□□□ 0.3
CPNE1-220ENST00000458038 ZNF780AO75290 641 aaPredicted RBP16.91■□□□□ 0.3
CPNE1-220ENST00000458038 MPV17LQ2QL34 196 aa16.91■□□□□ 0.3
CPNE1-220ENST00000458038 TMEM30BQ3MIR4 351 aa16.91■□□□□ 0.3
CPNE1-220ENST00000458038 ZFP1Q6P2D0 407 aa16.91■□□□□ 0.3
CPNE1-220ENST00000458038 OR51A2Q8NGJ7 313 aa16.91■□□□□ 0.3
CPNE1-220ENST00000458038 RTN4IP1Q8WWV3 396 aaPredicted RBP16.91■□□□□ 0.3
CPNE1-220ENST00000458038 PYDC1Q8WXC3 89 aa16.91■□□□□ 0.3
CPNE1-220ENST00000458038 RASL11BQ9BPW5 248 aa16.91■□□□□ 0.3
CPNE1-220ENST00000458038 CHCHD6Q9BRQ6 235 aa16.91■□□□□ 0.3
CPNE1-220ENST00000458038 ING4Q9UNL4 249 aa16.91■□□□□ 0.3
CPNE1-220ENST00000458038 TRAV39A0A0B4J263 110 aa16.9■□□□□ 0.3
CPNE1-220ENST00000458038 A0A1W2PPE3 182 aa16.9■□□□□ 0.3
CPNE1-220ENST00000458038 LINC01548A6NM66 108 aa16.9■□□□□ 0.3
CPNE1-220ENST00000458038 C15orf65H3BRN8 121 aa16.9■□□□□ 0.3
CPNE1-220ENST00000458038 SDCBPO00560 298 aaPredicted RBP16.9■□□□□ 0.3
CPNE1-220ENST00000458038 MOSP00540 346 aa16.9■□□□□ 0.3
CPNE1-220ENST00000458038 RPLP1P05386 114 aaKnown RBP16.9■□□□□ 0.3
CPNE1-220ENST00000458038 RAB25P57735 213 aa16.9■□□□□ 0.3
CPNE1-220ENST00000458038 PPP3R1P63098 170 aa16.9■□□□□ 0.3
CPNE1-220ENST00000458038 RPL22L1Q6P5R6 122 aaKnown RBP16.9■□□□□ 0.3
CPNE1-220ENST00000458038 STX19Q8N4C7 294 aa16.9■□□□□ 0.3
CPNE1-220ENST00000458038 TMEM104Q8NE00 496 aa16.9■□□□□ 0.3
CPNE1-220ENST00000458038 ST6GALNAC6Q969X2 333 aa16.9■□□□□ 0.3
CPNE1-220ENST00000458038 TMEM106AQ96A25 262 aa16.9■□□□□ 0.3
CPNE1-220ENST00000458038 PLSCR3Q9NRY6 295 aa16.9■□□□□ 0.3
CPNE1-220ENST00000458038 GFOD1Q9NXC2 390 aa16.9■□□□□ 0.3
CPNE1-220ENST00000458038 TAS2R4Q9NYW5 299 aa16.9■□□□□ 0.3
CPNE1-220ENST00000458038 ZNF580Q9UK33 172 aa16.9■□□□□ 0.3
CPNE1-220ENST00000458038 LSM4Q9Y4Z0 139 aaKnown RBP16.9■□□□□ 0.3
CPNE1-220ENST00000458038 U3KQK5 164 aa16.9■□□□□ 0.3
CPNE1-220ENST00000458038 IGHV3-72A0A0B4J1Y9 119 aa16.89■□□□□ 0.29
CPNE1-220ENST00000458038 DYNC1I1O14576 645 aa16.89■□□□□ 0.29
CPNE1-220ENST00000458038 CDRT1O95170 752 aa16.89■□□□□ 0.29
CPNE1-220ENST00000458038 ZNF93P35789 620 aaPredicted RBP16.89■□□□□ 0.29
CPNE1-220ENST00000458038 REG1BP48304 166 aa16.89■□□□□ 0.29
CPNE1-220ENST00000458038 SOX2P48431 317 aa16.89■□□□□ 0.29
CPNE1-220ENST00000458038 LCNL1Q6ZST4 164 aa16.89■□□□□ 0.29
CPNE1-220ENST00000458038 C10orf67Q8IYJ2 551 aa16.89■□□□□ 0.29
CPNE1-220ENST00000458038 CBR4Q8N4T8 237 aa16.89■□□□□ 0.29
CPNE1-220ENST00000458038 OR52I1Q8NGK6 324 aa16.89■□□□□ 0.29
CPNE1-220ENST00000458038 DUX3Q96PT4 197 aa16.89■□□□□ 0.29
CPNE1-220ENST00000458038 S1PR3Q99500 378 aa16.89■□□□□ 0.29
CPNE1-220ENST00000458038 SPACA1Q9HBV2 294 aa16.89■□□□□ 0.29
CPNE1-220ENST00000458038 AMBNQ9NP70 447 aa16.89■□□□□ 0.29
CPNE1-220ENST00000458038 FAM53CQ9NYF3 392 aa16.89■□□□□ 0.29
CPNE1-220ENST00000458038 AASSQ9UDR5 926 aa16.89■□□□□ 0.29
CPNE1-220ENST00000458038 GEMIN2O14893 280 aaKnown RBP16.88■□□□□ 0.29
CPNE1-220ENST00000458038 IGHG4P01861 327 aa16.88■□□□□ 0.29
CPNE1-220ENST00000458038 OR5H8P0DN80 308 aa16.88■□□□□ 0.29
CPNE1-220ENST00000458038 ZNF137PP52743 207 aa16.88■□□□□ 0.29
CPNE1-220ENST00000458038 GPR176Q14439 515 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms