RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 LIPKQ5VXJ0 399 aa13.02□□□□□ -0.32
CPSF6-203ENST00000456847 RAB12Q6IQ22 244 aa13.02□□□□□ -0.32
CPSF6-203ENST00000456847 CEACAM19Q7Z692 300 aa13.02□□□□□ -0.32
CPSF6-203ENST00000456847 ARL11Q969Q4 196 aa13.02□□□□□ -0.32
CPSF6-203ENST00000456847 FAM46BQ96A09 425 aa13.02□□□□□ -0.32
CPSF6-203ENST00000456847 ETAA1Q9NY74 926 aa13.02□□□□□ -0.32
CPSF6-203ENST00000456847 FAM90A22PA8MWA6 464 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 OOSP1A8MZH6 123 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 TSPAN15O95858 294 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 GZMHP20718 246 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 GLT8D1Q68CQ7 371 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 UNQ9370/PRO34162Q6UXP9 181 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 ZNF497Q6ZNH5 498 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 C16orf82Q7Z2V1 217 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 UBALD1Q8TB05 177 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 SLC25A33Q9BSK2 321 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 CST11Q9H112 138 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 DUSP21Q9H596 190 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 LINC00574Q9H8X3 128 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 RCC2Q9P258 522 aaKnown RBP13.01□□□□□ -0.33
CPSF6-203ENST00000456847 TRAPPC2LQ9UL33 140 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 PSG11Q9UQ72 335 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 PEX16Q9Y5Y5 336 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 SDCBPO00560 298 aaPredicted RBP13.01□□□□□ -0.33
CPSF6-203ENST00000456847 CSF1P09603 554 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 VDAC2P45880 294 aaPredicted RBP13.01□□□□□ -0.33
CPSF6-203ENST00000456847 Q8N2B8 174 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 TMEM104Q8NE00 496 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 OR10X1Q8NGY0 326 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 PHYHIPQ92561 330 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 TMEM203Q969S6 136 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 LIN7BQ9HAP6 207 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 GHRLQ9UBU3 117 aa13.01□□□□□ -0.33
CPSF6-203ENST00000456847 FAM90A10PA6NDY2 464 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 FAM90A18PA6NE21 464 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 FAM90A16PA6NEW6 464 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 FAM90A20PA6NIJ5 464 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 FAM90A7PA6NKC0 464 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 FAM90A12PA8MX19 464 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 FAM90A5PA8MXJ8 464 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 FAM90A23PA8MXZ1 464 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 MPIG6BO95866 241 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 FAM90A15PP0C7V4 464 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 FAM90A13PP0C7W8 464 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 FAM90A14PP0C7W9 464 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 FAM90A24PP0C7X0 464 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 UBBP0CG47 229 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 CRHBPP24387 322 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 MADCAM1Q13477 382 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 LYPD6Q86Y78 171 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 OR4K15Q8NH41 348 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 Q96M66 194 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 RAB9BQ9NP90 201 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 SERTAD4Q9NUC0 356 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 A0A1W2PPE3 182 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 LY6LH3BQJ8 138 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 FBXO24O75426 580 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 MT-ND4P03905 459 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 VHLP40337 213 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 BLCAPP62952 87 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 HIST2H2BDQ6DRA6 164 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 SLC16A12Q6ZSM3 486 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 PRSS48Q7RTY5 328 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 LRRTM1Q86UE6 522 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 FAM110DQ8TAY7 271 aaPredicted RBP13□□□□□ -0.33
CPSF6-203ENST00000456847 BLOC1S6Q9UL45 172 aa13□□□□□ -0.33
CPSF6-203ENST00000456847 IGHV3-43A0A0B4J1X8 118 aa12.99□□□□□ -0.33
CPSF6-203ENST00000456847 UBE2QL1A1L167 161 aa12.99□□□□□ -0.33
CPSF6-203ENST00000456847 ORC5O43913 435 aa12.99□□□□□ -0.33
CPSF6-203ENST00000456847 IGHV3-43DP0DP04 118 aa12.99□□□□□ -0.33
CPSF6-203ENST00000456847 SRMP19623 302 aa12.99□□□□□ -0.33
CPSF6-203ENST00000456847 FUT3P21217 361 aa12.99□□□□□ -0.33
CPSF6-203ENST00000456847 GP2P55259 537 aaKnown RBP12.99□□□□□ -0.33
CPSF6-203ENST00000456847 RPS25P62851 125 aaKnown RBP12.99□□□□□ -0.33
CPSF6-203ENST00000456847 MLLT11Q13015 90 aaPredicted RBP12.99□□□□□ -0.33
CPSF6-203ENST00000456847 TRAM1Q15629 374 aa12.99□□□□□ -0.33
CPSF6-203ENST00000456847 TMEM95Q3KNT9 176 aa12.99□□□□□ -0.33
CPSF6-203ENST00000456847 NKAPLQ5M9Q1 402 aa12.99□□□□□ -0.33
CPSF6-203ENST00000456847 C6orf183Q5T699 404 aa12.99□□□□□ -0.33
CPSF6-203ENST00000456847 SYT6Q5T7P8 510 aaPredicted RBP12.99□□□□□ -0.33
CPSF6-203ENST00000456847 PRR18Q8N4B5 295 aa12.99□□□□□ -0.33
CPSF6-203ENST00000456847 C15orf65H3BRN8 121 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 SPINT2O43291 252 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 OR2F2O95006 317 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 ATP6V1G2O95670 118 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 UCHL1P09936 223 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 MAP2K4P45985 399 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 RAB7AP51149 207 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 HES1Q14469 280 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 Q6ZS46 218 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 OR56B4Q8NH76 319 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 RBM14Q96PK6 669 aaKnown RBP12.98□□□□□ -0.33
CPSF6-203ENST00000456847 ISYNA1Q9NPH2 558 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 GFOD1Q9NXC2 390 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 MGAM2Q2M2H8 2515 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 PDCD6O75340 191 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 SNRNP70P08621 437 aaKnown RBP12.98□□□□□ -0.33
CPSF6-203ENST00000456847 FAM106CPP0CH98 169 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 PSMA1P25786 263 aaKnown RBP12.98□□□□□ -0.33
CPSF6-203ENST00000456847 HTR2CP28335 458 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms