RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 ZNF729A6NN14 1252 aaPredicted RBP12.06□□□□□ -0.48
SHANK2-210ENST00000449116 ORC5O43913 435 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 MSMBP08118 114 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 ZNF728P0DKX0 622 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 IGHV4-31P0DP07 118 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 GZMHP20718 246 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 KIR2DS4P43632 304 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 GZMKP49863 264 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 ZNF846Q147U1 533 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 KIR2DS1Q14954 304 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 BTNL3Q6UXE8 466 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 Q6ZS49 121 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 ZNF554Q86TJ5 538 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 HOGA1Q86XE5 327 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 CIARTQ8N365 385 aaPredicted RBP12.06□□□□□ -0.48
SHANK2-210ENST00000449116 Q8N402 240 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 GVQW1Q8N7I0 195 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 MAFIPQ8WZ33 124 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 ZNF714Q96N38 554 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 ST6GALNAC5Q9BVH7 336 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 GAL3ST2Q9H3Q3 398 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 TAF9BQ9HBM6 251 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 ZNF286AQ9HBT8 521 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 MMP26Q9NRE1 261 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 MTFP1Q9UDX5 166 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 OPN4Q9UHM6 478 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 ANAPC10Q9UM13 185 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 TEX15Q9BXT5 2789 aa12.06□□□□□ -0.48
SHANK2-210ENST00000449116 MYO9AB2RTY4 2548 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 KBTBD11-OT1A0A1B0GTJ5 212 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 TRDCB7Z8K6 153 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 C12orf77C9JDV5 145 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 SMAD7O15105 426 aaKnown RBP12.05□□□□□ -0.48
SHANK2-210ENST00000449116 RBBP9O75884 186 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 CGB3P0DN86 165 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 CGB7P0DN87 165 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 CCL3L1P16619 93 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 RCVRNP35243 200 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 SSTR5P35346 364 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 ACTBP60709 375 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 ACTG1P63261 375 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 HLA-DRB3P79483 266 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 SSBP1Q04837 148 aaKnown RBP12.05□□□□□ -0.48
SHANK2-210ENST00000449116 HMGN3Q15651 99 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 C17orf58Q2M2W7 97 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 BEST4Q8NFU0 473 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 MSI2Q96DH6 328 aaKnown RBP12.05□□□□□ -0.48
SHANK2-210ENST00000449116 COX4I2Q96KJ9 171 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 TSC22D3Q99576 134 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 THAP7Q9BT49 309 aaPredicted RBP12.05□□□□□ -0.48
SHANK2-210ENST00000449116 RAB9BQ9NP90 201 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 CALYQ9NYX4 217 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 KLK11Q9UBX7 282 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 RBMX2Q9Y388 322 aaKnown RBP12.05□□□□□ -0.48
SHANK2-210ENST00000449116 MED13LQ71F56 2210 aa12.05□□□□□ -0.48
SHANK2-210ENST00000449116 ABCA2Q9BZC7 2435 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 TRAV20A0A0B4J274 112 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 C15orf65H3BRN8 121 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 M0R1W7 72 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 FABP7O15540 132 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 SPINT2O43291 252 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 NAT1P18440 290 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 CD40LGP29965 261 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 PPP5CP53041 499 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 DLX6P56179 175 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 CYB5R2Q6BCY4 276 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 SPNS3Q6ZMD2 512 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 KIR3DL3Q8N743 410 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 ARL11Q969Q4 196 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 TMEM186Q96B77 213 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 SDHCQ99643 169 aaPredicted RBP12.04□□□□□ -0.48
SHANK2-210ENST00000449116 LINC00574Q9H8X3 128 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 ONECUT1Q9UBC0 465 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 INSIG2Q9Y5U4 225 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 ZNF469Q96JG9 3925 aaPredicted RBP12.04□□□□□ -0.48
SHANK2-210ENST00000449116 CR1P17927 2039 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 ITPR3Q14573 2671 aa12.04□□□□□ -0.48
SHANK2-210ENST00000449116 DSCAML1Q8TD84 2053 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 IGKV1D-8A0A087WSZ0 117 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 hCG_1809904A0A1W2PP81 198 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 A0A1W2PPE2 198 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 A0A1W2PR64 198 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 A0A1W2PRV1 198 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 C17orf98A8MV24 154 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 NPIPB11E5RHQ5 1161 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 HBZP02008 142 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 FCER2P06734 321 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 SCTP09683 121 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 GSTT2P0CG29 244 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 GSTT2BP0CG30 244 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 GATA3P23771 443 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 GDNFP39905 211 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 DVL1P1P54792 670 aaPredicted RBP12.03□□□□□ -0.48
SHANK2-210ENST00000449116 ARF6P62330 175 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 GLCCI1Q86VQ1 547 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 PRR18Q8N4B5 295 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 OR4A4PQ8NGN8 299 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 OR1L1Q8NH94 360 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 RFESDQ8TAC1 157 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 UBALD1Q8TB05 177 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms