RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 GDPGP1Q6ZNW5 385 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 RTN4RL2Q86UN3 420 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 ABHD12Q8N2K0 398 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 KCNG3Q8TAE7 436 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 ZNF596Q8TC21 504 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 SSX3Q99909 188 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 NCOR1P1Q9H4R4 102 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 ABCB10Q9NRK6 738 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 PEX16Q9Y5Y5 336 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 DSCAML1Q8TD84 2053 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 H3BUI4 141 aa11.79□□□□□ -0.52
USP39-206ENST00000448971 SLC17A2O00624 439 aa11.79□□□□□ -0.52
USP39-206ENST00000448971 TOR1AO14656 332 aa11.79□□□□□ -0.52
USP39-206ENST00000448971 PDCD5O14737 125 aa11.79□□□□□ -0.52
USP39-206ENST00000448971 RRP9O43818 475 aaKnown RBP11.79□□□□□ -0.52
USP39-206ENST00000448971 PDCD6O75340 191 aa11.79□□□□□ -0.52
USP39-206ENST00000448971 ARSBP15848 533 aa11.79□□□□□ -0.52
USP39-206ENST00000448971 RAG2P55895 527 aa11.79□□□□□ -0.52
USP39-206ENST00000448971 RPL15P61313 204 aaKnown RBP11.79□□□□□ -0.52
USP39-206ENST00000448971 SSX2Q16385 188 aa11.79□□□□□ -0.52
USP39-206ENST00000448971 LY6EQ16553 131 aa11.79□□□□□ -0.52
USP39-206ENST00000448971 MINOS1Q5TGZ0 78 aa11.79□□□□□ -0.52
USP39-206ENST00000448971 CCDC107Q8WV48 283 aa11.79□□□□□ -0.52
USP39-206ENST00000448971 KIRREL1Q96J84 757 aa11.79□□□□□ -0.52
USP39-206ENST00000448971 NEDD4LQ96PU5 975 aa11.79□□□□□ -0.52
USP39-206ENST00000448971 GFI1Q99684 422 aa11.79□□□□□ -0.52
USP39-206ENST00000448971 ZNF286AQ9HBT8 521 aa11.79□□□□□ -0.52
USP39-206ENST00000448971 PGPEP1Q9NXJ5 209 aa11.79□□□□□ -0.52
USP39-206ENST00000448971 IDI2-AS1Q9NZ38 188 aa11.79□□□□□ -0.52
USP39-206ENST00000448971 TRAPPC2LQ9UL33 140 aa11.79□□□□□ -0.52
USP39-206ENST00000448971 MINOS1-NBL1R4GNA1 71 aa11.79□□□□□ -0.52
USP39-206ENST00000448971 TRDV1A0A1B0GX56 115 aa11.78□□□□□ -0.52
USP39-206ENST00000448971 UBE2QL1A1L167 161 aa11.78□□□□□ -0.52
USP39-206ENST00000448971 FUT3P21217 361 aa11.78□□□□□ -0.52
USP39-206ENST00000448971 HTR1DP28221 377 aa11.78□□□□□ -0.52
USP39-206ENST00000448971 GNG10P50151 68 aa11.78□□□□□ -0.52
USP39-206ENST00000448971 RPS27AP62979 156 aaKnown RBP11.78□□□□□ -0.52
USP39-206ENST00000448971 UNC119Q13432 240 aa11.78□□□□□ -0.52
USP39-206ENST00000448971 HES5Q5TA89 166 aa11.78□□□□□ -0.52
USP39-206ENST00000448971 C22orf42Q6IC83 251 aa11.78□□□□□ -0.52
USP39-206ENST00000448971 CD200R1LQ6Q8B3 271 aa11.78□□□□□ -0.52
USP39-206ENST00000448971 ZNF497Q6ZNH5 498 aa11.78□□□□□ -0.52
USP39-206ENST00000448971 OR4P4Q8NGL7 312 aa11.78□□□□□ -0.52
USP39-206ENST00000448971 OR4F5Q8NH21 305 aa11.78□□□□□ -0.52
USP39-206ENST00000448971 RFESDQ8TAC1 157 aa11.78□□□□□ -0.52
USP39-206ENST00000448971 MALSU1Q96EH3 234 aa11.78□□□□□ -0.52
USP39-206ENST00000448971 AJUBAQ96IF1 538 aa11.78□□□□□ -0.52
USP39-206ENST00000448971 URM1Q9BTM9 101 aaKnown RBP11.78□□□□□ -0.52
USP39-206ENST00000448971 MEGF9Q9H1U4 602 aa11.78□□□□□ -0.52
USP39-206ENST00000448971 HILPDAQ9Y5L2 63 aa11.78□□□□□ -0.52
USP39-206ENST00000448971 V9GY05 133 aa11.78□□□□□ -0.52
USP39-206ENST00000448971 A0A1B0GUS0 222 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 TMEM14DPA8MWL7 114 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 F2RL2O00254 374 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 TNFAIP8O95379 198 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 CD34P28906 385 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 RANBP1P43487 201 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 PSMD7P51665 324 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 ARHGDIBP52566 201 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 CLDN12P56749 244 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 AANATQ16613 207 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 HLA-DRB5Q30154 266 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 C6orf183Q5T699 404 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 OR2W3Q7Z3T1 314 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 DYNAPQ8N1N2 210 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 OR4K15Q8NH41 348 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 OR9G1Q8NH87 305 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 UBALD1Q8TB05 177 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 WFDC12Q8WWY7 111 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 CITED1Q99966 193 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 NICN1Q9BSH3 213 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 ZFAND3Q9H8U3 227 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 VCX3AQ9NNX9 186 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 C1RLQ9NZP8 487 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 STUB1Q9UNE7 303 aa11.77□□□□□ -0.53
USP39-206ENST00000448971 A0A087X0M5 115 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 TRAV1-2A0A0B4J238 106 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 A0A1B0GX30 115 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 CA11O75493 328 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 IGHV3-7P01780 117 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 RAB3BP20337 219 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 GALP22466 123 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 CEACAM3P40198 252 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 PRRX1P54821 245 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 OR10A3P58181 314 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 RELBQ01201 579 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 LDLRAD2Q5SZI1 272 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 SYT6Q5T7P8 510 aaPredicted RBP11.76□□□□□ -0.53
USP39-206ENST00000448971 SIGIRRQ6IA17 410 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 PRR18Q8N4B5 295 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 OR10A7Q8NGE5 316 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 OR51D1Q8NGF3 324 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 LEAP2Q969E1 77 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 ARL11Q969Q4 196 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 TM2D1Q9BX74 207 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 BEX1Q9HBH7 125 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 RAB9BQ9NP90 201 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 DPM3Q9P2X0 92 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 STEAP1Q9UHE8 339 aa11.76□□□□□ -0.53
USP39-206ENST00000448971 SSR3Q9UNL2 185 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms