RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ABHD12Q8N2K0 398 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 OR11H6Q8NGC7 330 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 OR4K15Q8NH41 348 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 SSMEM1Q8WWF3 244 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 FAAP24Q9BTP7 215 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 DPAGT1Q9H3H5 408 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 CHMP1AQ9HD42 196 aaPredicted RBP11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 ESM1Q9NQ30 184 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 TNFRSF19Q9NS68 423 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 IDI2-AS1Q9NZ38 188 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 DAPK2Q9UIK4 370 aa11.42□□□□□ -0.58
GTF3C3-206ENST00000448539 METTL21EPA6NDL7 271 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 TOR1AO14656 332 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 SOCS1O15524 211 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 HOXA3O43365 443 aaPredicted RBP11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 SLC2A2P11168 524 aaPredicted RBP11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 RAB6AP20340 208 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 SSTR5P35346 364 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 PRRX1P54821 245 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 LSM3P62310 102 aaKnown RBP11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 SLC9A3R2Q15599 337 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 ZNF626Q68DY1 528 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 SFXN4Q6P4A7 337 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 TRAT1Q6PIZ9 186 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 Q6ZTK2 550 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 NR2C2APQ86WQ0 139 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 FAM89BQ8N5H3 189 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 OR10A7Q8NGE5 316 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 OR13F1Q8NGS4 319 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 RFESDQ8TAC1 157 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 ZNF596Q8TC21 504 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 DYRK2Q92630 601 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 ARL11Q969Q4 196 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 SULT4A1Q9BR01 284 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 KCNIP1Q9NZI2 227 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 TBL2Q9Y4P3 447 aaKnown RBP11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 POMT1Q9Y6A1 747 aa11.41□□□□□ -0.58
GTF3C3-206ENST00000448539 A0A0A6YYD4 124 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 A0A0B4J203 849 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 FAM172BPA6NC97 362 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 CLDN34H7C241 214 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 LDLRAD4O15165 306 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 SPINT2O43291 252 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 ORC5O43913 435 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 CLEC2LP0C7M8 214 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 CGB3P0DN86 165 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 CGB7P0DN87 165 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 KRTAP24-1Q3LI83 254 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 LDLRAD3Q86YD5 345 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 TMEM86BQ8N661 226 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 NDNFQ8TB73 568 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 FAM216AQ8WUB2 273 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 PTX4Q96A99 478 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 MALSU1Q96EH3 234 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 KIRREL1Q96J84 757 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 FUNDC2Q9BWH2 189 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 LINC00574Q9H8X3 128 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 HSF4Q9ULV5 492 aa11.4□□□□□ -0.58
GTF3C3-206ENST00000448539 ODF3BA8MYP8 253 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 NPIPB11E5RHQ5 1161 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 HTR1DP28221 377 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 GDNFP39905 211 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 IER3P46695 156 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 ACTG1P63261 375 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 MRPS15P82914 257 aaKnown RBP11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 IDNKQ5T6J7 187 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 MINOS1Q5TGZ0 78 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 BAIAP2L2Q6UXY1 529 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 GPR141Q7Z602 305 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 LHFPL4Q7Z7J7 247 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 CROCCP3Q8IVE0 287 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 GAPTQ8N292 157 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 PRR18Q8N4B5 295 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 BEND2Q8NDZ0 799 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 SETD6Q8TBK2 473 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 MRPL30Q8TCC3 161 aaKnown RBP11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 CREB3L1Q96BA8 519 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 RAB3CQ96E17 227 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 ARHGAP5-AS1Q96IT6 56 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 C19orf24Q9BVV8 132 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 ATG5Q9H1Y0 275 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 RIMS4Q9H426 269 aaPredicted RBP11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 ZNRD1Q9P1U0 126 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 MINOS1-NBL1R4GNA1 71 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 DSCAML1Q8TD84 2053 aa11.39□□□□□ -0.59
GTF3C3-206ENST00000448539 A0A087X0M5 115 aa11.38□□□□□ -0.59
GTF3C3-206ENST00000448539 A0A1B0GX30 115 aa11.38□□□□□ -0.59
GTF3C3-206ENST00000448539 C12orf77C9JDV5 145 aa11.38□□□□□ -0.59
GTF3C3-206ENST00000448539 SDCBPO00560 298 aaPredicted RBP11.38□□□□□ -0.59
GTF3C3-206ENST00000448539 TMEM127O75204 238 aa11.38□□□□□ -0.59
GTF3C3-206ENST00000448539 IGHV4-59P01825 116 aa11.38□□□□□ -0.59
GTF3C3-206ENST00000448539 CRYBA1P05813 215 aa11.38□□□□□ -0.59
GTF3C3-206ENST00000448539 RNASE1P07998 156 aaKnown RBP11.38□□□□□ -0.59
GTF3C3-206ENST00000448539 SNRPBP14678 240 aaKnown RBP11.38□□□□□ -0.59
GTF3C3-206ENST00000448539 RCC1P18754 421 aaPredicted RBP11.38□□□□□ -0.59
GTF3C3-206ENST00000448539 CD34P28906 385 aa11.38□□□□□ -0.59
GTF3C3-206ENST00000448539 CEACAM3P40198 252 aa11.38□□□□□ -0.59
GTF3C3-206ENST00000448539 EFNB2P52799 333 aa11.38□□□□□ -0.59
GTF3C3-206ENST00000448539 TMEM50BP56557 158 aa11.38□□□□□ -0.59
GTF3C3-206ENST00000448539 PLA2G7Q13093 441 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms