RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 RPL23AP62750 156 aaKnown RBP11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 LINC00696Q6ZRV3 163 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 OR5T1Q8NG75 326 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 LYPD6BQ8NI32 183 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 RHOVQ96L33 236 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 TMEM222Q9H0R3 208 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 RNF122Q9H9V4 155 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 OR1A1Q9P1Q5 309 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 ERRFI1Q9UJM3 462 aaPredicted RBP11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 UBE2CO00762 179 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 RHBDL1O75783 438 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 NR2C1P13056 603 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 DTYMKP23919 212 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 FUT6P51993 359 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 B3GALT5-AS1P59052 145 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 ARL6IP1Q15041 203 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 SPINK9Q5DT21 86 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 BEND4Q6ZU67 534 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 ZNF429Q86V71 674 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 CMTM1Q8IZ96 169 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 PLPPR2Q96GM1 343 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 SSX3Q99909 188 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 ZNF665Q9H7R5 613 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 AKAP13Q12802 2813 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 ZNF816-ZNF321PA0A0X1KG74 233 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 OR6C6A6NF89 314 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 TRGC2P03986 189 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 AKR1C8PQ5T2L2 129 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 ATP1A1-AS1Q5TC04 95 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 ZNF880Q6PDB4 577 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 Q6ZRM9 215 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 CCDC71LQ8N9Z2 235 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 OR2Y1Q8NGV0 311 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 RNF150Q9ULK6 438 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 KCNS2Q9ULS6 477 aa11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 NOSIPQ9Y314 301 aaKnown RBP11.23□□□□□ -0.61
SLC48A1-201ENST00000442218 IFITM10A6NMD0 228 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 MRPL33O75394 65 aaKnown RBP11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 FOLR3P41439 243 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 IL11RAQ14626 422 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 IL13RA2Q14627 380 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 DECR2Q9NUI1 292 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 WSB1Q9Y6I7 421 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 PCSK5Q92824 1860 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 POLEQ07864 2286 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 LOC102725191A0A1B0GVB3 256 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 AP4M1O00189 453 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 SSX7Q7RTT5 188 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 MRPL21Q7Z2W9 205 aaKnown RBP11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 IL22RA1Q8N6P7 574 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 GPR61Q9BZJ8 451 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 ARV1Q9H2C2 271 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 TMED3Q9Y3Q3 217 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 TPRP12270 2363 aaKnown RBP11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 KIAA1324LA8MWY0 1029 aaPredicted RBP11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 WDR1O75083 606 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 TUBG1P23258 451 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 CEBPDP49716 269 aaPredicted RBP11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 MLF1P58340 268 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 LINC00205P59089 165 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 GPR157Q5UAW9 335 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 DBX2Q6ZNG2 339 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 PPP1R32Q7Z5V6 425 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 ZNF100Q8IYN0 542 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 OR10D4PQ8NGN7 298 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 SIGLEC12Q96PQ1 595 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 ZNF251Q9BRH9 671 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 DOK5Q9P104 306 aa11.22□□□□□ -0.61
SLC48A1-201ENST00000442218 LRRC3CA6NJW4 275 aa11.21□□□□□ -0.61
SLC48A1-201ENST00000442218 SIRPB1O00241 398 aa11.21□□□□□ -0.61
SLC48A1-201ENST00000442218 CST2P09228 141 aa11.21□□□□□ -0.61
SLC48A1-201ENST00000442218 ACP1P24666 158 aa11.21□□□□□ -0.61
SLC48A1-201ENST00000442218 ECI1P42126 302 aa11.21□□□□□ -0.61
SLC48A1-201ENST00000442218 WDR25Q64LD2 544 aaPredicted RBP11.21□□□□□ -0.61
SLC48A1-201ENST00000442218 OR2T2Q6IF00 324 aa11.21□□□□□ -0.61
SLC48A1-201ENST00000442218 ALKBH2Q6NS38 261 aa11.21□□□□□ -0.61
SLC48A1-201ENST00000442218 CXorf67Q86X51 503 aaPredicted RBP11.21□□□□□ -0.61
SLC48A1-201ENST00000442218 OR2V1Q8NHB1 315 aa11.21□□□□□ -0.61
SLC48A1-201ENST00000442218 PCNX2A6NKB5 2137 aa11.21□□□□□ -0.61
SLC48A1-201ENST00000442218 HSPA12AO43301 675 aa11.21□□□□□ -0.62
SLC48A1-201ENST00000442218 SOX15O60248 233 aa11.21□□□□□ -0.62
SLC48A1-201ENST00000442218 COL8A2P25067 703 aa11.21□□□□□ -0.62
SLC48A1-201ENST00000442218 ICAM4Q14773 271 aa11.21□□□□□ -0.62
SLC48A1-201ENST00000442218 HIKESHIQ53FT3 197 aa11.21□□□□□ -0.62
SLC48A1-201ENST00000442218 RTL6Q6ICC9 239 aa11.21□□□□□ -0.62
SLC48A1-201ENST00000442218 OR8G2PQ6IF36 304 aa11.21□□□□□ -0.62
SLC48A1-201ENST00000442218 TCTEX1D2Q8WW35 142 aa11.21□□□□□ -0.62
SLC48A1-201ENST00000442218 GGACTQ9BVM4 153 aa11.21□□□□□ -0.62
SLC48A1-201ENST00000442218 EGLN1Q9GZT9 426 aa11.21□□□□□ -0.62
SLC48A1-201ENST00000442218 PRO1933Q9H354 126 aa11.21□□□□□ -0.62
SLC48A1-201ENST00000442218 PLEKHF2Q9H8W4 249 aa11.21□□□□□ -0.62
SLC48A1-201ENST00000442218 A0A1W2PNU3 283 aaPredicted RBP11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 IGHV2-5P01817 119 aa11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 CA6P23280 308 aa11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 EIF2S3P41091 472 aaKnown RBP11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 ARL16Q0P5N6 197 aa11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 TRA2AQ13595 282 aaKnown RBP eCLIP11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 PYY3Q5JQD4 70 aa11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 PLA2G2CQ5R387 149 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms