RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 IGLL1P15814 213 aa14.67□□□□□ -0.06
AC004540.1-201ENST00000439120 HNF4GQ14541 408 aa14.67□□□□□ -0.06
AC004540.1-201ENST00000439120 Q499Y3 187 aa14.67□□□□□ -0.06
AC004540.1-201ENST00000439120 YIF1BQ5BJH7 314 aa14.67□□□□□ -0.06
AC004540.1-201ENST00000439120 TCTEX1D4Q5JR98 221 aa14.67□□□□□ -0.06
AC004540.1-201ENST00000439120 Q6ZPA2 131 aa14.67□□□□□ -0.06
AC004540.1-201ENST00000439120 JAGN1Q8N5M9 183 aa14.67□□□□□ -0.06
AC004540.1-201ENST00000439120 C8orf4Q9NR00 106 aa14.67□□□□□ -0.06
AC004540.1-201ENST00000439120 ZNF581Q9P0T4 197 aa14.67□□□□□ -0.06
AC004540.1-201ENST00000439120 CLEC2DQ9UHP7 191 aa14.67□□□□□ -0.06
AC004540.1-201ENST00000439120 A0A1W2PPE3 182 aa14.66□□□□□ -0.06
AC004540.1-201ENST00000439120 CCRL2O00421 344 aa14.66□□□□□ -0.06
AC004540.1-201ENST00000439120 HSD17B6O14756 317 aa14.66□□□□□ -0.06
AC004540.1-201ENST00000439120 LALBAP00709 142 aa14.66□□□□□ -0.06
AC004540.1-201ENST00000439120 IGKV1D-33P01593 117 aa14.66□□□□□ -0.06
AC004540.1-201ENST00000439120 IGKV1-33P01594 117 aa14.66□□□□□ -0.06
AC004540.1-201ENST00000439120 LOXL3P58215 753 aa14.66□□□□□ -0.06
AC004540.1-201ENST00000439120 DIAPH2-AS1Q14236 149 aa14.66□□□□□ -0.06
AC004540.1-201ENST00000439120 C10orf99Q6UWK7 81 aa14.66□□□□□ -0.06
AC004540.1-201ENST00000439120 MOB3BQ86TA1 216 aa14.66□□□□□ -0.06
AC004540.1-201ENST00000439120 DHRSXQ8N5I4 330 aa14.66□□□□□ -0.06
AC004540.1-201ENST00000439120 ZFP41Q8N8Y5 198 aa14.66□□□□□ -0.06
AC004540.1-201ENST00000439120 WFDC9Q8NEX5 89 aa14.66□□□□□ -0.06
AC004540.1-201ENST00000439120 CCDC107Q8WV48 283 aa14.66□□□□□ -0.06
AC004540.1-201ENST00000439120 ARL11Q969Q4 196 aa14.66□□□□□ -0.06
AC004540.1-201ENST00000439120 SPACA1Q9HBV2 294 aa14.66□□□□□ -0.06
AC004540.1-201ENST00000439120 AURKAIP1Q9NWT8 199 aaPredicted RBP14.66□□□□□ -0.06
AC004540.1-201ENST00000439120 TRBV5-5A0A0J9YX44 114 aa14.65□□□□□ -0.06
AC004540.1-201ENST00000439120 SERPINE3A8MV23 424 aa14.65□□□□□ -0.06
AC004540.1-201ENST00000439120 AIPO00170 330 aa14.65□□□□□ -0.06
AC004540.1-201ENST00000439120 GAPDHP04406 335 aaKnown RBP14.65□□□□□ -0.06
AC004540.1-201ENST00000439120 IL3RAP26951 378 aa14.65□□□□□ -0.06
AC004540.1-201ENST00000439120 TAS2R43P59537 309 aa14.65□□□□□ -0.06
AC004540.1-201ENST00000439120 FOXB2Q5VYV0 432 aa14.65□□□□□ -0.06
AC004540.1-201ENST00000439120 DMKNQ6E0U4 476 aaPredicted RBP14.65□□□□□ -0.06
AC004540.1-201ENST00000439120 PACRGLQ8N7B6 248 aa14.65□□□□□ -0.06
AC004540.1-201ENST00000439120 C5orf56Q8N8D9 126 aa14.65□□□□□ -0.06
AC004540.1-201ENST00000439120 CHPT1Q8WUD6 406 aa14.65□□□□□ -0.06
AC004540.1-201ENST00000439120 RAB9BQ9NP90 201 aa14.65□□□□□ -0.06
AC004540.1-201ENST00000439120 MRPS28Q9Y2Q9 187 aaKnown RBP14.65□□□□□ -0.06
AC004540.1-201ENST00000439120 PNMA8CA0A1B0GUJ8 204 aa14.64□□□□□ -0.07
AC004540.1-201ENST00000439120 A0A1W2PP11 408 aa14.64□□□□□ -0.07
AC004540.1-201ENST00000439120 EFCAB10A6NFE3 127 aa14.64□□□□□ -0.07
AC004540.1-201ENST00000439120 MCRIP1C9JLW8 97 aa14.64□□□□□ -0.07
AC004540.1-201ENST00000439120 FGF16O43320 207 aa14.64□□□□□ -0.07
AC004540.1-201ENST00000439120 IGFBP3P17936 291 aaPredicted RBP14.64□□□□□ -0.07
AC004540.1-201ENST00000439120 FSTP19883 344 aa14.64□□□□□ -0.07
AC004540.1-201ENST00000439120 REG1BP48304 166 aa14.64□□□□□ -0.07
AC004540.1-201ENST00000439120 ZNF816Q0VGE8 651 aaPredicted RBP14.64□□□□□ -0.07
AC004540.1-201ENST00000439120 ST3GAL4Q11206 333 aa14.64□□□□□ -0.07
AC004540.1-201ENST00000439120 ZNF329Q86UD4 541 aa14.64□□□□□ -0.07
AC004540.1-201ENST00000439120 FOXRED2Q8IWF2 684 aa14.64□□□□□ -0.07
AC004540.1-201ENST00000439120 OR51D1Q8NGF3 324 aa14.64□□□□□ -0.07
AC004540.1-201ENST00000439120 OR52M1Q8NGK5 317 aa14.64□□□□□ -0.07
AC004540.1-201ENST00000439120 UBALD1Q8TB05 177 aa14.64□□□□□ -0.07
AC004540.1-201ENST00000439120 MUL1Q969V5 352 aa14.64□□□□□ -0.07
AC004540.1-201ENST00000439120 RCC1LQ96I51 464 aaKnown RBP14.64□□□□□ -0.07
AC004540.1-201ENST00000439120 OR14A2Q96R54 314 aa14.64□□□□□ -0.07
AC004540.1-201ENST00000439120 TRAV8-7A0A075B6U6 113 aa14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 IGHV1-3A0A0C4DH29 117 aa14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 A0A1W2PPK0 400 aa14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 MAGEA13PA6NCF6 341 aa14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 NCBP2LA6PVI3 153 aaKnown RBP14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 MYL12BO14950 172 aa14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 SPINT2O43291 252 aa14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 ORC5O43913 435 aa14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 GPX5O75715 221 aa14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 DUS4LO95620 317 aaKnown RBP14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 SLC35B1P78383 322 aa14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 AWAT2Q6E213 333 aa14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 GLIPR1L1Q6UWM5 242 aa14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 ZNF497Q6ZNH5 498 aa14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 SLC35E3Q7Z769 313 aa14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 C8orf59Q8N0T1 100 aaPredicted RBP14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 GGHQ92820 318 aa14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 MRPS24Q96EL2 167 aaKnown RBP14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 PGLYRP3Q96LB9 341 aa14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 TRAPPC2LQ9UL33 140 aa14.63□□□□□ -0.07
AC004540.1-201ENST00000439120 IGHV3-43A0A0B4J1X8 118 aa14.62□□□□□ -0.07
AC004540.1-201ENST00000439120 NUDT19A8MXV4 375 aa14.62□□□□□ -0.07
AC004540.1-201ENST00000439120 C15orf65H3BRN8 121 aa14.62□□□□□ -0.07
AC004540.1-201ENST00000439120 MT-ND4P03905 459 aa14.62□□□□□ -0.07
AC004540.1-201ENST00000439120 MAS1P04201 325 aa14.62□□□□□ -0.07
AC004540.1-201ENST00000439120 IGHV3-43DP0DP04 118 aa14.62□□□□□ -0.07
AC004540.1-201ENST00000439120 ADARB1P78563 741 aaKnown RBP14.62□□□□□ -0.07
AC004540.1-201ENST00000439120 RCN1Q15293 331 aa14.62□□□□□ -0.07
AC004540.1-201ENST00000439120 PRR18Q8N4B5 295 aa14.62□□□□□ -0.07
AC004540.1-201ENST00000439120 LINC00311Q8N616 119 aa14.62□□□□□ -0.07
AC004540.1-201ENST00000439120 NOL4LQ96MY1 436 aaPredicted RBP14.62□□□□□ -0.07
AC004540.1-201ENST00000439120 GFOD1Q9NXC2 390 aa14.62□□□□□ -0.07
AC004540.1-201ENST00000439120 ETAA1Q9NY74 926 aa14.62□□□□□ -0.07
AC004540.1-201ENST00000439120 CNOT2Q9NZN8 540 aaKnown RBP14.62□□□□□ -0.07
AC004540.1-201ENST00000439120 GNG12Q9UBI6 72 aa14.62□□□□□ -0.07
AC004540.1-201ENST00000439120 NOTCH3Q9UM47 2321 aa14.62□□□□□ -0.07
AC004540.1-201ENST00000439120 TRBV5-7A0A0A0MS05 114 aa14.61□□□□□ -0.07
AC004540.1-201ENST00000439120 IGHV3-72A0A0B4J1Y9 119 aa14.61□□□□□ -0.07
AC004540.1-201ENST00000439120 MPIG6BO95866 241 aa14.61□□□□□ -0.07
AC004540.1-201ENST00000439120 CAPGP40121 348 aa14.61□□□□□ -0.07
AC004540.1-201ENST00000439120 RPS11P62280 158 aaKnown RBP eCLIP14.61□□□□□ -0.07
AC004540.1-201ENST00000439120 C6orf183Q5T699 404 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms