RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 CDRT1O95170 752 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 PSMB9P28065 219 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 IL12BP29460 328 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 LCN1P31025 176 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 HOXA6P31267 233 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 PMELP40967 661 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 PPP1R2P41236 205 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 CBX5P45973 191 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 RAB38P57729 211 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 RAB14P61106 215 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 BNIP2Q12982 314 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 TRIP13Q15645 432 aaPredicted RBP3.52□□□□□ -1.85
USP54-206ENST00000433394 UBE2NLQ5JXB2 153 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 PPP1R2P3Q6NXS1 205 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 AKAP14Q86UN6 197 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 LRRC6Q86X45 466 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 OR2M7Q8NG81 312 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 OR4K2Q8NGD2 314 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 OR5H2Q8NGV7 314 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 ZBED3Q96IU2 234 aaPredicted RBP3.52□□□□□ -1.85
USP54-206ENST00000433394 RSPO3Q9BXY4 272 aaPredicted RBP3.52□□□□□ -1.85
USP54-206ENST00000433394 NXF2Q9GZY0 626 aaKnown RBP3.52□□□□□ -1.85
USP54-206ENST00000433394 C8orf4Q9NR00 106 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 PARP11Q9NR21 331 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 DDIT4Q9NX09 232 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 NKIRAS1Q9NYS0 192 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 CLEC2DQ9UHP7 191 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 LAMB1P07942 1786 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 TIAM2Q8IVF5 1701 aa3.52□□□□□ -1.85
USP54-206ENST00000433394 ROBO3Q96MS0 1386 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 ECM29Q5VYK3 1845 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 C2orf16Q68DN1 1984 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 MYH8P13535 1937 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 IGKV6-21A0A0C4DH24 114 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 TMEM210A6NLX4 147 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 RPL36A-HNRNPH2H7BZ11 118 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 PLPP3O14495 311 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 CBR3O75828 277 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 CD8AP01732 235 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 TAC1P20366 129 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 TTPAP49638 278 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 UAP1Q16222 522 aaPredicted RBP3.51□□□□□ -1.85
USP54-206ENST00000433394 BCL2A1Q16548 175 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 SAPCD1Q5SSQ6 148 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 KCTD16Q68DU8 428 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 MORN3Q6PF18 240 aaPredicted RBP3.51□□□□□ -1.85
USP54-206ENST00000433394 LRRC34Q8IZ02 419 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 SLC35G3Q8N808 338 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 ST20-AS1Q8NBB2 130 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 SLC26A10Q8NG04 563 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 OR4K17Q8NGC6 315 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 ANGPTL6Q8NI99 470 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 ZNF420Q8TAQ5 688 aaPredicted RBP3.51□□□□□ -1.85
USP54-206ENST00000433394 UBA3Q8TBC4 463 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 CEP19Q96LK0 163 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 ZFP3Q96NJ6 502 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 BBS2Q9BXC9 721 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 PLEKHA1Q9HB21 404 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 RWDD2AQ9UIY3 292 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 NXT1Q9UKK6 140 aaKnown RBP3.51□□□□□ -1.85
USP54-206ENST00000433394 PAIP2BQ9ULR5 123 aaKnown RBP3.51□□□□□ -1.85
USP54-206ENST00000433394 SLC22A14Q9Y267 594 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 GOLGB1Q14789 3259 aaKnown RBP3.51□□□□□ -1.85
USP54-206ENST00000433394 NID2Q14112 1375 aa3.51□□□□□ -1.85
USP54-206ENST00000433394 MYH1P12882 1939 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 NAV1Q8NEY1 1877 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 CDK5RAP2Q96SN8 1893 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 COL1A1P02452 1464 aaPredicted RBP3.5□□□□□ -1.85
USP54-206ENST00000433394 A0A1W2PQ67 120 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 ZNF98A6NK75 572 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 OR2AT4A6NND4 320 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 CD300LBA8K4G0 201 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 GOLGA8KD6RF30 607 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 DHRS3O75911 302 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 CD28P10747 220 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 NTF3P20783 257 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 IDH2P48735 452 aaKnown RBP3.5□□□□□ -1.85
USP54-206ENST00000433394 TUFMP49411 452 aaKnown RBP3.5□□□□□ -1.85
USP54-206ENST00000433394 CMC4P56277 68 aaPredicted RBP3.5□□□□□ -1.85
USP54-206ENST00000433394 FADDQ13158 208 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 CLEC12AQ5QGZ9 265 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 DNLZQ5SXM8 178 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 SMIM5Q71RC9 77 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 NT5DC3Q86UY8 548 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 PLCZ1Q86YW0 608 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 LRRC8AQ8IWT6 810 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 MIR7-3HGQ8N6C7 128 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 DEDD2Q8WXF8 326 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 WDR34Q96EX3 536 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 YPEL4Q96NS1 127 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 PITX2Q99697 317 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 SCRT1Q9BWW7 348 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 MRPL40Q9NQ50 206 aaKnown RBP3.5□□□□□ -1.85
USP54-206ENST00000433394 INIPQ9NRY2 104 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 USH1CQ9Y6N9 552 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 SCN9AQ15858 1988 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 BAZ2AQ9UIF9 1905 aaKnown RBP3.5□□□□□ -1.85
USP54-206ENST00000433394 PLIN4Q96Q06 1357 aa3.5□□□□□ -1.85
USP54-206ENST00000433394 COL4A1P02462 1669 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 KIR2DS1A0A191URI9 304 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms