RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 H3BN98 237 aa11.94□□□□□ -0.5
NUP50-209ENST00000432340 KDM4BO94953 1096 aa11.94□□□□□ -0.5
NUP50-209ENST00000432340 SEMG1P04279 462 aa11.94□□□□□ -0.5
NUP50-209ENST00000432340 HMGN1P05114 100 aa11.94□□□□□ -0.5
NUP50-209ENST00000432340 BMI1P35226 326 aa11.94□□□□□ -0.5
NUP50-209ENST00000432340 CRIP2P52943 208 aaPredicted RBP11.94□□□□□ -0.5
NUP50-209ENST00000432340 PDZK1IP1Q13113 114 aa11.94□□□□□ -0.5
NUP50-209ENST00000432340 KLF5Q13887 457 aaPredicted RBP11.94□□□□□ -0.5
NUP50-209ENST00000432340 PAN3Q58A45 887 aaKnown RBP11.94□□□□□ -0.5
NUP50-209ENST00000432340 SPSB1Q96BD6 273 aa11.94□□□□□ -0.5
NUP50-209ENST00000432340 DGCR6LQ9BY27 220 aa11.94□□□□□ -0.5
NUP50-209ENST00000432340 EFCAB1Q9HAE3 211 aa11.94□□□□□ -0.5
NUP50-209ENST00000432340 NEK6Q9HC98 313 aa11.94□□□□□ -0.5
NUP50-209ENST00000432340 PEMTQ9UBM1 199 aa11.94□□□□□ -0.5
NUP50-209ENST00000432340 DNAH10Q8IVF4 4471 aa11.93□□□□□ -0.5
NUP50-209ENST00000432340 A0A0G2JLM5 398 aa11.93□□□□□ -0.5
NUP50-209ENST00000432340 C13orf42A0A1B0GVH6 325 aa11.93□□□□□ -0.5
NUP50-209ENST00000432340 ZNF736B4DX44 427 aaPredicted RBP11.93□□□□□ -0.5
NUP50-209ENST00000432340 NBR2O15453 112 aa11.93□□□□□ -0.5
NUP50-209ENST00000432340 AIREO43918 545 aa11.93□□□□□ -0.5
NUP50-209ENST00000432340 PAX5Q02548 391 aa11.93□□□□□ -0.5
NUP50-209ENST00000432340 ACTBL2Q562R1 376 aa11.93□□□□□ -0.5
NUP50-209ENST00000432340 SLC16A13Q7RTY0 426 aa11.93□□□□□ -0.5
NUP50-209ENST00000432340 LYG2Q86SG7 212 aa11.93□□□□□ -0.5
NUP50-209ENST00000432340 WFDC3Q8IUB2 231 aa11.93□□□□□ -0.5
NUP50-209ENST00000432340 DEFB125Q8N687 156 aa11.93□□□□□ -0.5
NUP50-209ENST00000432340 PHLDA1Q8WV24 401 aaPredicted RBP11.93□□□□□ -0.5
NUP50-209ENST00000432340 GGTLC1Q9BX51 225 aa11.93□□□□□ -0.5
NUP50-209ENST00000432340 RAB9BQ9NP90 201 aa11.93□□□□□ -0.5
NUP50-209ENST00000432340 SLC23A1Q9UHI7 598 aa11.93□□□□□ -0.5
NUP50-209ENST00000432340 TP53TG1Q9Y2A0 90 aa11.93□□□□□ -0.5
NUP50-209ENST00000432340 MUC4Q99102 2169 aa11.92□□□□□ -0.5
NUP50-209ENST00000432340 SOX15O60248 233 aa11.92□□□□□ -0.5
NUP50-209ENST00000432340 APOL3O95236 402 aa11.92□□□□□ -0.5
NUP50-209ENST00000432340 SSTR5P35346 364 aa11.92□□□□□ -0.5
NUP50-209ENST00000432340 ZNF137PP52743 207 aa11.92□□□□□ -0.5
NUP50-209ENST00000432340 SYNJ2BPP57105 145 aa11.92□□□□□ -0.5
NUP50-209ENST00000432340 ACTBP60709 375 aa11.92□□□□□ -0.5
NUP50-209ENST00000432340 C5orf64Q2M2E5 130 aa11.92□□□□□ -0.5
NUP50-209ENST00000432340 Q6P435 159 aa11.92□□□□□ -0.5
NUP50-209ENST00000432340 CD200R1LQ6Q8B3 271 aa11.92□□□□□ -0.5
NUP50-209ENST00000432340 HACD2Q6Y1H2 254 aa11.92□□□□□ -0.5
NUP50-209ENST00000432340 SAXO1Q8IYX7 474 aa11.92□□□□□ -0.5
NUP50-209ENST00000432340 ABHD5Q8WTS1 349 aa11.92□□□□□ -0.5
NUP50-209ENST00000432340 ANKRD60Q9BZ19 345 aa11.92□□□□□ -0.5
NUP50-209ENST00000432340 MAGEL2Q9UJ55 1249 aa11.92□□□□□ -0.5
NUP50-209ENST00000432340 A0A1B0GVY2 172 aa11.91□□□□□ -0.5
NUP50-209ENST00000432340 SDCBPO00560 298 aaPredicted RBP11.91□□□□□ -0.5
NUP50-209ENST00000432340 EDF1O60869 148 aaKnown RBP11.91□□□□□ -0.5
NUP50-209ENST00000432340 SRSF10O75494 262 aaKnown RBP11.91□□□□□ -0.5
NUP50-209ENST00000432340 TFAP2AP05549 437 aa11.91□□□□□ -0.5
NUP50-209ENST00000432340 DBTP11182 482 aaKnown RBP11.91□□□□□ -0.5
NUP50-209ENST00000432340 HCCSP53701 268 aa11.91□□□□□ -0.5
NUP50-209ENST00000432340 MICAQ29983 383 aa11.91□□□□□ -0.5
NUP50-209ENST00000432340 AKIRIN2Q53H80 203 aa11.91□□□□□ -0.5
NUP50-209ENST00000432340 ZNF322Q6U7Q0 402 aaPredicted RBP11.91□□□□□ -0.5
NUP50-209ENST00000432340 CD300LDQ6UXZ3 194 aa11.91□□□□□ -0.5
NUP50-209ENST00000432340 IL34Q6ZMJ4 242 aa11.91□□□□□ -0.5
NUP50-209ENST00000432340 SLC25A48Q6ZT89 311 aaKnown RBP11.91□□□□□ -0.5
NUP50-209ENST00000432340 CPOQ8IVL8 374 aa11.91□□□□□ -0.5
NUP50-209ENST00000432340 RNF183Q96D59 192 aa11.91□□□□□ -0.5
NUP50-209ENST00000432340 CNOT2Q9NZN8 540 aaKnown RBP11.91□□□□□ -0.5
NUP50-209ENST00000432340 ABCD2Q9UBJ2 740 aa11.91□□□□□ -0.5
NUP50-209ENST00000432340 FBXO7Q9Y3I1 522 aa11.91□□□□□ -0.5
NUP50-209ENST00000432340 H0YJX3 145 aa11.9□□□□□ -0.5
NUP50-209ENST00000432340 HSPB6O14558 160 aa11.9□□□□□ -0.5
NUP50-209ENST00000432340 OR2A4O95047 310 aa11.9□□□□□ -0.5
NUP50-209ENST00000432340 TRGV3P03979 118 aa11.9□□□□□ -0.5
NUP50-209ENST00000432340 IFNA4P05014 189 aa11.9□□□□□ -0.5
NUP50-209ENST00000432340 CSN3P07498 182 aa11.9□□□□□ -0.5
NUP50-209ENST00000432340 LSAMPQ13449 338 aa11.9□□□□□ -0.5
NUP50-209ENST00000432340 TMEM30BQ3MIR4 351 aa11.9□□□□□ -0.5
NUP50-209ENST00000432340 C19orf54Q5BKX5 351 aa11.9□□□□□ -0.5
NUP50-209ENST00000432340 STEAP3Q658P3 488 aa11.9□□□□□ -0.5
NUP50-209ENST00000432340 IQCF1Q8N6M8 205 aa11.9□□□□□ -0.5
NUP50-209ENST00000432340 CASTOR1Q8WTX7 329 aa11.9□□□□□ -0.5
NUP50-209ENST00000432340 NSMCE2Q96MF7 247 aa11.9□□□□□ -0.5
NUP50-209ENST00000432340 MS4A10Q96PG2 267 aa11.9□□□□□ -0.5
NUP50-209ENST00000432340 KRTAP4-5Q9BYR2 181 aa11.9□□□□□ -0.5
NUP50-209ENST00000432340 SPAG4Q9NPE6 437 aa11.9□□□□□ -0.5
NUP50-209ENST00000432340 A3GALT2U3KPV4 340 aa11.9□□□□□ -0.5
NUP50-209ENST00000432340 LOC102724200A0A096LPH7 203 aaPredicted RBP11.89□□□□□ -0.51
NUP50-209ENST00000432340 LRRC36Q1X8D7 754 aa11.89□□□□□ -0.51
NUP50-209ENST00000432340 UTS2BQ765I0 119 aa11.89□□□□□ -0.51
NUP50-209ENST00000432340 OPALINQ96PE5 141 aa11.89□□□□□ -0.51
NUP50-209ENST00000432340 CNN2Q99439 309 aaKnown RBP11.89□□□□□ -0.51
NUP50-209ENST00000432340 MFFQ9GZY8 342 aa11.89□□□□□ -0.51
NUP50-209ENST00000432340 GFOD1Q9NXC2 390 aa11.89□□□□□ -0.51
NUP50-209ENST00000432340 ABCA13Q86UQ4 5058 aa11.89□□□□□ -0.51
NUP50-209ENST00000432340 KIAA2026Q5HYC2 2103 aa11.89□□□□□ -0.51
NUP50-209ENST00000432340 IZUMO1RA6ND01 250 aa11.88□□□□□ -0.51
NUP50-209ENST00000432340 H3BUA1 57 aa11.88□□□□□ -0.51
NUP50-209ENST00000432340 LANCL1O43813 399 aa11.88□□□□□ -0.51
NUP50-209ENST00000432340 MRPL3P09001 348 aaKnown RBP11.88□□□□□ -0.51
NUP50-209ENST00000432340 CD7P09564 240 aa11.88□□□□□ -0.51
NUP50-209ENST00000432340 ATF1P18846 271 aa11.88□□□□□ -0.51
NUP50-209ENST00000432340 PLGLAQ15195 96 aa11.88□□□□□ -0.51
NUP50-209ENST00000432340 GUCA2BQ16661 112 aa11.88□□□□□ -0.51
NUP50-209ENST00000432340 RPEL1Q2QD12 228 aa11.88□□□□□ -0.51
NUP50-209ENST00000432340 RSBN1Q5VWQ0 802 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms