RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 KCNIP2Q9NS61 270 aa0.93□□□□□ -2.26
CDC40-204ENST00000431461 SCML1Q9UN30 329 aa0.93□□□□□ -2.26
CDC40-204ENST00000431461 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.93□□□□□ -2.26
CDC40-204ENST00000431461 ALG5Q9Y673 324 aa0.93□□□□□ -2.26
CDC40-204ENST00000431461 ARAP3Q8WWN8 1544 aa0.93□□□□□ -2.26
CDC40-204ENST00000431461 FBN3Q75N90 2809 aa0.93□□□□□ -2.26
CDC40-204ENST00000431461 CEP170Q5SW79 1584 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 PTPRKQ15262 1439 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 GRIFINA4D1Z8 144 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 A8MWP6 167 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 FAM25EA8MYX2 175 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 F5H5T6 163 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 K7ERQ8 282 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 TOR1AO14656 332 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 SLC25A20O43772 301 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 OR4A8P0C604 315 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 CTLA4P16410 223 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 GZMHP20718 246 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 PLTPP55058 493 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 MP68P56378 58 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 TMED1Q13445 227 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 MAPK14Q16539 360 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 LAIR2Q6ISS4 152 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 DNAAF3Q8N9W5 541 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 OR10P1Q8NGE3 313 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 OR4P4Q8NGL7 312 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 OR2K2Q8NGT1 345 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 MFSD8Q8NHS3 518 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 SMIM12Q96EX1 92 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 DNAJC30Q96LL9 226 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 MBOAT7Q96N66 472 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 LINC01587Q99440 93 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 EBNA1BP2Q99848 306 aaKnown RBP0.92□□□□□ -2.26
CDC40-204ENST00000431461 C1QTNF6Q9BXI9 259 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 OR52A5Q9H2C5 316 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 DMAC2Q9NW81 257 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 TXNL4BQ9NX01 149 aaKnown RBP0.92□□□□□ -2.26
CDC40-204ENST00000431461 MAT2BQ9NZL9 334 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 RBM12B-AS1Q9P1G2 102 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 OR5V1Q9UGF6 321 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 SLC23A2Q9UGH3 650 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 PSMD13Q9UNM6 376 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 RBMX2Q9Y388 322 aaKnown RBP0.92□□□□□ -2.26
CDC40-204ENST00000431461 WASHC3Q9Y3C0 194 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 PHLDA3Q9Y5J5 127 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 U3KQK5 164 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 BRD4O60885 1362 aaPredicted RBP0.92□□□□□ -2.26
CDC40-204ENST00000431461 KIAA0232Q92628 1395 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 ZNF407Q9C0G0 2248 aa0.92□□□□□ -2.26
CDC40-204ENST00000431461 TRGV4A0A0C4DH28 118 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 A0A1B0GW15 77 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 DHRS12A0PJE2 317 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 C17orf51A8MQB3 221 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 NEMFO60524 1076 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 SHOX2O60902 331 aaPredicted RBP0.91□□□□□ -2.26
CDC40-204ENST00000431461 S1PR2O95136 353 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 RAB36O95755 333 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 LTAP01374 205 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 CTSEP14091 401 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 CD99P14209 185 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 GABRA1P14867 456 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 CSRP1P21291 193 aaKnown RBP0.91□□□□□ -2.26
CDC40-204ENST00000431461 ATP5J2P56134 94 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 KRTAP12-3P60328 96 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 FAM3AP98173 230 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 SKP2Q13309 424 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 OR8G1Q15617 311 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 HENMT1Q5T8I9 393 aaKnown RBP0.91□□□□□ -2.26
CDC40-204ENST00000431461 NOXRED1Q6NXP6 359 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 TTC33Q6PID6 262 aaPredicted RBP0.91□□□□□ -2.26
CDC40-204ENST00000431461 AHSA2Q719I0 299 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 SPATA24Q86W54 205 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 GATD1Q8NB37 220 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 OR4C16Q8NGL9 310 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 OR5AK3PQ8NH89 298 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 OR2V1Q8NHB1 315 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 CD200R1Q8TD46 325 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 PDCD6IPQ8WUM4 868 aaKnown RBP0.91□□□□□ -2.26
CDC40-204ENST00000431461 CACNG8Q8WXS5 425 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 CYTH2Q99418 400 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 PRSS27Q9BQR3 290 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 ZNF436Q9C0F3 470 aaPredicted RBP0.91□□□□□ -2.26
CDC40-204ENST00000431461 EIF5A2Q9GZV4 153 aaKnown RBP0.91□□□□□ -2.26
CDC40-204ENST00000431461 CHMP4BQ9H444 224 aaKnown RBP0.91□□□□□ -2.26
CDC40-204ENST00000431461 SMDT1Q9H4I9 107 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 SPANXB1Q9NS25 103 aaPredicted RBP0.91□□□□□ -2.26
CDC40-204ENST00000431461 CLEC2DQ9UHP7 191 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 LINC00588Q9Y4M8 146 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 ADAMTSL3P82987 1691 aa0.91□□□□□ -2.26
CDC40-204ENST00000431461 ITGB4P16144 1822 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 PLXNB3Q9ULL4 1909 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 IGKV1D-37A0A075B6S9 117 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 A0A1B0GX12 115 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 ERICH4A6NGS2 130 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 KNCNA6PVL3 124 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 EFCAB9A8MZ26 197 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 B4DEV8 164 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 F5H5K5 113 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 SYNGR1O43759 233 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 CGB3P0DN86 165 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms