RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 KPTNQ9Y664 436 aa3.96□□□□□ -1.78
RFC4-204ENST00000417876 DENND4CQ5VZ89 1909 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 MTCL1Q9Y4B5 1905 aaKnown RBP3.95□□□□□ -1.78
RFC4-204ENST00000417876 CCDC88CQ9P219 2028 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 NUP210LQ5VU65 1888 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 A0A087WUJ7 227 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 A0A0B4J2E0 115 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 IGKV1-8A0A0C4DH67 115 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 A0A1B0GW64 132 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 A0A1B0GX12 115 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 C7orf77A4D0Y5 90 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 SLC17A2O00624 439 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 PHOX2AO14813 284 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 ARPC3O15145 178 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 ZNF208O43345 1280 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 DUX1O43812 170 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 SRPX2O60687 465 aaPredicted RBP3.95□□□□□ -1.78
RFC4-204ENST00000417876 DNAJB6O75190 326 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 ALOX12BO75342 701 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 CGAP01215 116 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 RPN2P04844 631 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 GYPBP06028 91 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 GUSBP08236 651 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 RNH1P13489 461 aaKnown RBP3.95□□□□□ -1.78
RFC4-204ENST00000417876 GTF2F2P13984 249 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 PGAM2P15259 253 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 NQO2P16083 231 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 PSMB6P28072 239 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 NTSP30990 170 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 RPL4P36578 427 aaKnown RBP3.95□□□□□ -1.78
RFC4-204ENST00000417876 RBM34P42696 430 aaKnown RBP3.95□□□□□ -1.78
RFC4-204ENST00000417876 GLP1RP43220 463 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 OR1D4P47884 311 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 NCBP2P52298 156 aaKnown RBP eCLIP3.95□□□□□ -1.78
RFC4-204ENST00000417876 SLC25A1P53007 311 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 CSNK1G2P78368 415 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 DEFA6Q01524 100 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 TGM3Q08188 693 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 PPP1R1AQ13522 171 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 ARHGAP19Q14CB8 494 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 OR1Q1Q15612 314 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 NDUFAF6Q330K2 333 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 Q499Y3 187 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 BEX5Q5H9J7 111 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 FHL5Q5TD97 284 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 CST9Q5W186 159 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 TPGS2Q68CL5 300 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 OR10K2Q6IF99 312 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 SLC48A1Q6P1K1 146 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 TMEM220Q6QAJ8 160 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 NPSR1Q6W5P4 371 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 HEPN1Q6WQI6 88 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 STX12Q86Y82 276 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 ZNF547Q8IVP9 402 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 CYB561A3Q8NBI2 242 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 VN1R2Q8NFZ6 395 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 OR9A4Q8NGU2 314 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 OR6X1Q8NH79 312 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 LCN9Q8WX39 176 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 GPX7Q96SL4 187 aaPredicted RBP3.95□□□□□ -1.78
RFC4-204ENST00000417876 PFDN5Q99471 154 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 SLC6A7Q99884 636 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 AIF1LQ9BQI0 150 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 NMES1Q9C002 83 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 COMMD4Q9H0A8 199 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 TOLLIPQ9H0E2 274 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 CST11Q9H112 138 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 ZBP1Q9H171 429 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 EXO5Q9H790 373 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 FN3KRPQ9HA64 309 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 TREM1Q9NP99 234 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 PARP11Q9NR21 331 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 KLHL28Q9NXS3 571 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 TP53TG5Q9Y2B4 290 aa3.95□□□□□ -1.78
RFC4-204ENST00000417876 PRG3Q9Y2Y8 225 aaPredicted RBP3.95□□□□□ -1.78
RFC4-204ENST00000417876 MDC1Q14676 2089 aaKnown RBP3.94□□□□□ -1.78
RFC4-204ENST00000417876 CASP8AP2Q9UKL3 1982 aa3.94□□□□□ -1.78
RFC4-204ENST00000417876 PLXND1Q9Y4D7 1925 aa3.94□□□□□ -1.78
RFC4-204ENST00000417876 TRAV27A0A087WT01 109 aa3.94□□□□□ -1.78
RFC4-204ENST00000417876 TRAV9-2A0A087WT02 112 aa3.94□□□□□ -1.78
RFC4-204ENST00000417876 A0A0A6YYH2 397 aa3.94□□□□□ -1.78
RFC4-204ENST00000417876 TVP23AA6NH52 213 aa3.94□□□□□ -1.78
RFC4-204ENST00000417876 A6NJ64 397 aa3.94□□□□□ -1.78
RFC4-204ENST00000417876 OR2AT4A6NND4 320 aa3.94□□□□□ -1.78
RFC4-204ENST00000417876 MBTPS2O43462 519 aa3.94□□□□□ -1.78
RFC4-204ENST00000417876 RAB3DO95716 219 aa3.94□□□□□ -1.78
RFC4-204ENST00000417876 AIFM1O95831 613 aa3.94□□□□□ -1.78
RFC4-204ENST00000417876 GAPDHP04406 335 aaKnown RBP3.94□□□□□ -1.78
RFC4-204ENST00000417876 IFI6P09912 130 aa3.94□□□□□ -1.78
RFC4-204ENST00000417876 COX5BP10606 129 aa3.94□□□□□ -1.78
RFC4-204ENST00000417876 HIST1H1CP16403 213 aaKnown RBP3.94□□□□□ -1.78
RFC4-204ENST00000417876 IGFBP3P17936 291 aaPredicted RBP3.94□□□□□ -1.78
RFC4-204ENST00000417876 CSNK2A2P19784 350 aaPredicted RBP3.94□□□□□ -1.78
RFC4-204ENST00000417876 HNRNPA2B1P22626 353 aaKnown RBP3.94□□□□□ -1.78
RFC4-204ENST00000417876 GATA2P23769 480 aaPredicted RBP3.94□□□□□ -1.78
RFC4-204ENST00000417876 GABRR2P28476 465 aa3.94□□□□□ -1.78
RFC4-204ENST00000417876 PRSS3P35030 304 aa3.94□□□□□ -1.78
RFC4-204ENST00000417876 KIR3DL2P43630 455 aa3.94□□□□□ -1.78
RFC4-204ENST00000417876 CX3CR1P49238 355 aa3.94□□□□□ -1.78
RFC4-204ENST00000417876 SLC11A1P49279 550 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms