RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 PRSS48Q7RTY5 328 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 CCDC107Q8WV48 283 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 PHYHIPQ92561 330 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 TMEM203Q969S6 136 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 RPEQ96AT9 228 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 AKR1E2Q96JD6 320 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 PRSS22Q9GZN4 317 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 MMP28Q9H239 520 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 RAB9BQ9NP90 201 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 ISYNA1Q9NPH2 558 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 ETAA1Q9NY74 926 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 ZNF581Q9P0T4 197 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 TRAPPC2LQ9UL33 140 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 SIGLEC9Q9Y336 463 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 PEX16Q9Y5Y5 336 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 TRAV39A0A0B4J263 110 aa9.02□□□□□ -0.97
RFFL-204ENST00000414419 OOSP1A8MZH6 123 aa9.02□□□□□ -0.97
RFFL-204ENST00000414419 NPIPB11E5RHQ5 1161 aa9.02□□□□□ -0.97
RFFL-204ENST00000414419 J3QR06 171 aa9.02□□□□□ -0.97
RFFL-204ENST00000414419 IGHV3-7P01780 117 aa9.02□□□□□ -0.97
RFFL-204ENST00000414419 JUNBP17275 347 aaPredicted RBP9.02□□□□□ -0.97
RFFL-204ENST00000414419 FUT3P21217 361 aa9.02□□□□□ -0.97
RFFL-204ENST00000414419 PSMA1P25786 263 aaKnown RBP9.02□□□□□ -0.97
RFFL-204ENST00000414419 SSTR5P35346 364 aa9.02□□□□□ -0.97
RFFL-204ENST00000414419 KRTAP10-3P60369 221 aa9.02□□□□□ -0.97
RFFL-204ENST00000414419 MLLT11Q13015 90 aaPredicted RBP9.02□□□□□ -0.97
RFFL-204ENST00000414419 FAM27D1Q5T7N8 215 aa9.02□□□□□ -0.97
RFFL-204ENST00000414419 CCBE1Q6UXH8 406 aaPredicted RBP9.02□□□□□ -0.97
RFFL-204ENST00000414419 SLC16A12Q6ZSM3 486 aa9.02□□□□□ -0.97
RFFL-204ENST00000414419 ARL11Q969Q4 196 aa9.02□□□□□ -0.97
RFFL-204ENST00000414419 FAM46BQ96A09 425 aa9.02□□□□□ -0.97
RFFL-204ENST00000414419 MGLLQ99685 303 aa9.02□□□□□ -0.97
RFFL-204ENST00000414419 Q9H521 79 aa9.02□□□□□ -0.97
RFFL-204ENST00000414419 LINC00574Q9H8X3 128 aa9.02□□□□□ -0.97
RFFL-204ENST00000414419 WNK1Q9H4A3 2382 aa9.02□□□□□ -0.97
RFFL-204ENST00000414419 MGAM2Q2M2H8 2515 aa9.02□□□□□ -0.97
RFFL-204ENST00000414419 PKD1L1Q8TDX9 2849 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 SDCBPO00560 298 aaPredicted RBP9.01□□□□□ -0.97
RFFL-204ENST00000414419 SPINT2O43291 252 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 ORC5O43913 435 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 CA11O75493 328 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 ARL6IP5O75915 188 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 MPIG6BO95866 241 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 MT-ND4P03905 459 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 GLAP06280 429 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 UCHL1P09936 223 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 VSIG10L2P0DP72 767 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 CPEP16870 476 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 HTR2CP28335 458 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 GNG10P50151 68 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 EFNB2P52799 333 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 MADCAM1Q13477 382 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 TPBGQ13641 420 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 HERPUD1Q15011 391 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 C6orf183Q5T699 404 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 TPTE2P1Q5T6R2 138 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 SYT6Q5T7P8 510 aaPredicted RBP9.01□□□□□ -0.97
RFFL-204ENST00000414419 ZNF497Q6ZNH5 498 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 C16orf82Q7Z2V1 217 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 LYPD6Q86Y78 171 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 TMEM104Q8NE00 496 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 OR10X1Q8NGY0 326 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 LEAP2Q969E1 77 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 TOMM40LQ969M1 308 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 RCC2Q9P258 522 aaKnown RBP9.01□□□□□ -0.97
RFFL-204ENST00000414419 PSG11Q9UQ72 335 aa9.01□□□□□ -0.97
RFFL-204ENST00000414419 UBE2QL1A1L167 161 aa9□□□□□ -0.97
RFFL-204ENST00000414419 SC5DO75845 299 aa9□□□□□ -0.97
RFFL-204ENST00000414419 FAM106CPP0CH98 169 aa9□□□□□ -0.97
RFFL-204ENST00000414419 CD24P25063 80 aa9□□□□□ -0.97
RFFL-204ENST00000414419 RANBP1P43487 201 aa9□□□□□ -0.97
RFFL-204ENST00000414419 MAP2K4P45985 399 aa9□□□□□ -0.97
RFFL-204ENST00000414419 GP2P55259 537 aaKnown RBP9□□□□□ -0.97
RFFL-204ENST00000414419 RPS25P62851 125 aaKnown RBP9□□□□□ -0.97
RFFL-204ENST00000414419 NKAPLQ5M9Q1 402 aa9□□□□□ -0.97
RFFL-204ENST00000414419 TRAT1Q6PIZ9 186 aa9□□□□□ -0.97
RFFL-204ENST00000414419 LRRTM1Q86UE6 522 aa9□□□□□ -0.97
RFFL-204ENST00000414419 KLHDC1Q8N7A1 406 aa9□□□□□ -0.97
RFFL-204ENST00000414419 OR52M1Q8NGK5 317 aa9□□□□□ -0.97
RFFL-204ENST00000414419 OR4K15Q8NH41 348 aa9□□□□□ -0.97
RFFL-204ENST00000414419 KCNG3Q8TAE7 436 aa9□□□□□ -0.97
RFFL-204ENST00000414419 Q96M66 194 aa9□□□□□ -0.97
RFFL-204ENST00000414419 NEDD4LQ96PU5 975 aa9□□□□□ -0.97
RFFL-204ENST00000414419 SLC25A33Q9BSK2 321 aa9□□□□□ -0.97
RFFL-204ENST00000414419 TMEM59Q9BXS4 323 aa9□□□□□ -0.97
RFFL-204ENST00000414419 PLGRKTQ9HBL7 147 aa9□□□□□ -0.97
RFFL-204ENST00000414419 KCNIP1Q9NZI2 227 aa9□□□□□ -0.97
RFFL-204ENST00000414419 LY6LH3BQJ8 138 aa8.99□□□□□ -0.97
RFFL-204ENST00000414419 RRP9O43818 475 aaKnown RBP8.99□□□□□ -0.97
RFFL-204ENST00000414419 PDCD6O75340 191 aa8.99□□□□□ -0.97
RFFL-204ENST00000414419 VSIG8P0DPA2 414 aa8.99□□□□□ -0.97
RFFL-204ENST00000414419 IL3RAP26951 378 aa8.99□□□□□ -0.97
RFFL-204ENST00000414419 VDAC2P45880 294 aaPredicted RBP8.99□□□□□ -0.97
RFFL-204ENST00000414419 RAB7AP51149 207 aa8.99□□□□□ -0.97
RFFL-204ENST00000414419 BLCAPP62952 87 aa8.99□□□□□ -0.97
RFFL-204ENST00000414419 HABP2Q14520 560 aaPredicted RBP8.99□□□□□ -0.97
RFFL-204ENST00000414419 TBCEQ15813 527 aaPredicted RBP8.99□□□□□ -0.97
RFFL-204ENST00000414419 C2orf68Q2NKX9 166 aa8.99□□□□□ -0.97
RFFL-204ENST00000414419 C1orf100Q5SVJ3 147 aa8.99□□□□□ -0.97
RFFL-204ENST00000414419 UTF1Q5T230 341 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms