RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 TMEM100Q9NV29 134 aa8.41□□□□□ -1.06
DDB1-202ENST00000414411 MBD2Q9UBB5 411 aa8.41□□□□□ -1.06
DDB1-202ENST00000414411 NUP50Q9UKX7 468 aa8.41□□□□□ -1.06
DDB1-202ENST00000414411 HSF4Q9ULV5 492 aa8.41□□□□□ -1.06
DDB1-202ENST00000414411 MPC1Q9Y5U8 109 aa8.41□□□□□ -1.06
DDB1-202ENST00000414411 ARID1AO14497 2285 aa8.4□□□□□ -1.06
DDB1-202ENST00000414411 CHD3Q12873 2000 aaKnown RBP8.4□□□□□ -1.06
DDB1-202ENST00000414411 CSMD2Q7Z408 3487 aa8.4□□□□□ -1.06
DDB1-202ENST00000414411 IGKV1D-8A0A087WSZ0 117 aa8.4□□□□□ -1.06
DDB1-202ENST00000414411 C13orf42A0A1B0GVH6 325 aa8.4□□□□□ -1.06
DDB1-202ENST00000414411 ZSCAN5BA6NJL1 495 aa8.4□□□□□ -1.06
DDB1-202ENST00000414411 ANKRD30BLA7E2S9 258 aa8.4□□□□□ -1.06
DDB1-202ENST00000414411 ZNF850A8MQ14 1090 aa8.4□□□□□ -1.06
DDB1-202ENST00000414411 PLATP00750 562 aa8.4□□□□□ -1.06
DDB1-202ENST00000414411 CSTBP04080 98 aaKnown RBP8.4□□□□□ -1.06
DDB1-202ENST00000414411 PSMB6P28072 239 aa8.4□□□□□ -1.06
DDB1-202ENST00000414411 LUMP51884 338 aaPredicted RBP8.4□□□□□ -1.06
DDB1-202ENST00000414411 CYCSP99999 105 aaKnown RBP8.4□□□□□ -1.06
DDB1-202ENST00000414411 SLC9A3R2Q15599 337 aa8.4□□□□□ -1.06
DDB1-202ENST00000414411 FAM209AQ5JX71 171 aa8.4□□□□□ -1.06
DDB1-202ENST00000414411 PDZD9Q8IXQ8 264 aa8.4□□□□□ -1.06
DDB1-202ENST00000414411 PIGCQ92535 297 aa8.4□□□□□ -1.06
DDB1-202ENST00000414411 GTF3AQ92664 365 aaKnown RBP8.4□□□□□ -1.06
DDB1-202ENST00000414411 HDHD3Q9BSH5 251 aaPredicted RBP8.4□□□□□ -1.06
DDB1-202ENST00000414411 SLC25A32Q9H2D1 315 aa8.4□□□□□ -1.06
DDB1-202ENST00000414411 CBLN4Q9NTU7 201 aa8.4□□□□□ -1.06
DDB1-202ENST00000414411 NAV2Q8IVL1 2488 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 TRBV6-7A0A0A0MS04 114 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 H0YL77 283 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 ZP3P21754 424 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 PRDX4Q13162 271 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 TAF9Q16594 264 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 ANKRD55Q3KP44 614 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 FAM76BQ5HYJ3 339 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 ZNF787Q6DD87 383 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 ZSCAN4Q8NAM6 433 aaPredicted RBP8.39□□□□□ -1.07
DDB1-202ENST00000414411 INO80EQ8NBZ0 244 aaPredicted RBP8.39□□□□□ -1.07
DDB1-202ENST00000414411 HPSE2Q8WWQ2 592 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 OR5P3Q8WZ94 311 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 PHYHIPLQ96FC7 376 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 TECTBQ96PL2 329 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 PAPOLGQ9BWT3 736 aaKnown RBP8.39□□□□□ -1.07
DDB1-202ENST00000414411 FGF23Q9GZV9 251 aaPredicted RBP8.39□□□□□ -1.07
DDB1-202ENST00000414411 MS4A5Q9H3V2 200 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 IFT22Q9H7X7 185 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 UBTD1Q9HAC8 227 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 RASL12Q9NYN1 266 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 IL36GQ9NZH8 169 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 GPR160Q9UJ42 338 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 ZDHHC8Q9ULC8 765 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 EDARQ9UNE0 448 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 LAMP3Q9UQV4 416 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 SESN1Q9Y6P5 492 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 ANKRD17O75179 2603 aaKnown RBP8.39□□□□□ -1.07
DDB1-202ENST00000414411 IGKV1-12A0A0C4DH73 117 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 C17orf100A8MU93 164 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 A8MXK9 166 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 ADAP1O75689 374 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 IGKV1D-12P01611 117 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 PF4P02776 101 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 FGF2P09038 288 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 GLRA1P23415 457 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 CHATP28329 748 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 ECI1P42126 302 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 FUT6P51993 359 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 KRTAP10-9P60411 292 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 CEACAM21Q3KPI0 293 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 C20orf204Q6ZNR8 217 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 TMEM200AQ86VY9 491 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 ZCCHC24Q8N2G6 241 aaKnown RBP8.39□□□□□ -1.07
DDB1-202ENST00000414411 SPERTQ8NA61 448 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 PXT1Q8NFP0 134 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 FAAP24Q9BTP7 215 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 ZNF471Q9BX82 626 aaPredicted RBP8.39□□□□□ -1.07
DDB1-202ENST00000414411 NCOR1P1Q9H4R4 102 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 PRR13Q9NZ81 148 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 ZNF581Q9P0T4 197 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 AK3Q9UIJ7 227 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 ANXA10Q9UJ72 324 aa8.39□□□□□ -1.07
DDB1-202ENST00000414411 PDZD2O15018 2839 aa8.38□□□□□ -1.07
DDB1-202ENST00000414411 PGPEP1LA6NFU8 196 aa8.38□□□□□ -1.07
DDB1-202ENST00000414411 OVOL3O00110 214 aa8.38□□□□□ -1.07
DDB1-202ENST00000414411 SCO1O75880 301 aa8.38□□□□□ -1.07
DDB1-202ENST00000414411 PTBP3O95758 552 aaKnown RBP8.38□□□□□ -1.07
DDB1-202ENST00000414411 IGHV1-46P01743 117 aa8.38□□□□□ -1.07
DDB1-202ENST00000414411 TMEM11P17152 192 aa8.38□□□□□ -1.07
DDB1-202ENST00000414411 M6PRP20645 277 aa8.38□□□□□ -1.07
DDB1-202ENST00000414411 DTYMKP23919 212 aa8.38□□□□□ -1.07
DDB1-202ENST00000414411 ARPC4P59998 168 aa8.38□□□□□ -1.07
DDB1-202ENST00000414411 PDZK1IP1Q13113 114 aa8.38□□□□□ -1.07
DDB1-202ENST00000414411 FAM74A1Q5RGS3 127 aa8.38□□□□□ -1.07
DDB1-202ENST00000414411 PLCXD3Q63HM9 321 aa8.38□□□□□ -1.07
DDB1-202ENST00000414411 MOB3CQ70IA8 216 aa8.38□□□□□ -1.07
DDB1-202ENST00000414411 HSD17B13Q7Z5P4 300 aaPredicted RBP8.38□□□□□ -1.07
DDB1-202ENST00000414411 ZDHHC23Q8IYP9 409 aa8.38□□□□□ -1.07
DDB1-202ENST00000414411 EIF4E3Q8N5X7 224 aaKnown RBP8.38□□□□□ -1.07
DDB1-202ENST00000414411 OR5A2Q8NGI9 324 aa8.38□□□□□ -1.07
DDB1-202ENST00000414411 DCUN1D4Q92564 292 aa8.38□□□□□ -1.07
DDB1-202ENST00000414411 MRPS24Q96EL2 167 aaKnown RBP8.38□□□□□ -1.07
DDB1-202ENST00000414411 LINC00052Q96N35 136 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms