RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 TLCD2A6NGC4 264 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 J3KT08 172 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 FGF18O76093 207 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 TBX18O95935 607 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 DCTDP32321 178 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 ORMDL2Q53FV1 153 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 LINC00299Q6ZSB3 139 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 WFDC8Q8IUA0 241 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM45BQ96B21 275 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 NRN1Q9NPD7 142 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 COA3Q9Y2R0 106 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-202ENST00000411767 TRAV1-2A0A0B4J238 106 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 PPIHO43447 177 aaKnown RBP4.05□□□□□ -1.76
PTPN13-202ENST00000411767 IFITM1P13164 125 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 SELENOWP63302 87 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 MMDQ15546 238 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 DUSP28Q4G0W2 176 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 PQLC2Q6ZP29 291 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 SLC16A13Q7RTY0 426 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 SUSD3Q96L08 255 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 EBF4Q9BQW3 602 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 PLAGL1Q9UM63 463 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 TCRBV5S4A2TA0A5A2 114 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 FAM171A2A8MVW0 826 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 NPIPB8E9PQR5 432 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 NPIPB9F8W1W9 429 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 SELPP16109 830 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 RCC1P18754 421 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-202ENST00000411767 OTX1P32242 354 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-202ENST00000411767 CFHR2P36980 270 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 IFITM2Q01629 132 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 NNATQ16517 81 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 MBNL2Q5VZF2 373 aaKnown RBP4.05□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM215Q68D42 235 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 ANKRD34AQ69YU3 496 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 RIMKLAQ8IXN7 391 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 DRAM1Q8N682 238 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 CHCHD1Q96BP2 118 aaKnown RBP4.05□□□□□ -1.76
PTPN13-202ENST00000411767 CFHR5Q9BXR6 569 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 SMOC2Q9H3U7 446 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 RNF11Q9Y3C5 154 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 TET3O43151 1660 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 SPHKAPQ2M3C7 1700 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 KIAA1210Q9ULL0 1709 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 IGHV3OR16-12A0A075B7B8 117 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 LOC390937A0A1W2PQ73 354 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 SIGLEC5O15389 551 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 HSPB1P04792 205 aaKnown RBP4.05□□□□□ -1.76
PTPN13-202ENST00000411767 SAA1P0DJI8 122 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-202ENST00000411767 SMIM18P0DKX4 95 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 ZNF137PP52743 207 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM176BQ3YBM2 270 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-202ENST00000411767 RNF165Q6ZSG1 346 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 WFDC3Q8IUB2 231 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 ZNF683Q8IZ20 524 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM229BQ8NBD8 167 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 OR52I2Q8NH67 350 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 ZNRF2Q8NHG8 242 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 SFXN3Q9BWM7 321 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 EDC4Q6P2E9 1401 aaKnown RBP4.05□□□□□ -1.76
PTPN13-202ENST00000411767 IQSEC2Q5JU85 1478 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 CFAP74Q9C0B2 1584 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 hADV29S1A0JD25 119 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 FOXI3A8MTJ6 420 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-202ENST00000411767 PROP1O75360 226 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 EIF3GO75821 320 aaKnown RBP eCLIP4.05□□□□□ -1.76
PTPN13-202ENST00000411767 TCRAP04437 139 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 DAOP14920 347 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 VEGFAP15692 232 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-202ENST00000411767 PSMB5P28074 263 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 CMC4P56277 68 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-202ENST00000411767 SDHAF4Q5VUM1 108 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 PAQR3Q6TCH7 311 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 CASC2Q6XLA1 102 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 PTPMT1Q8WUK0 201 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-202ENST00000411767 GPR84Q9NQS5 396 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 RPUSD1Q9UJJ7 312 aaKnown RBP4.05□□□□□ -1.76
PTPN13-202ENST00000411767 ADGRL3Q9HAR2 1447 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 TRAV8-6A0A0B4J262 113 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 LYRM9A8MSI8 78 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 TBXA2RP21731 343 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 LINC00158P58513 81 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 SLC25A11Q02978 314 aaKnown RBP4.05□□□□□ -1.76
PTPN13-202ENST00000411767 CDK5R1Q15078 307 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 C2orf68Q2NKX9 166 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 MBOAT2Q6ZWT7 520 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 TEN1Q86WV5 123 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 SMIM2Q9BVW6 85 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 IGKV3D-15A0A087WSY6 115 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 JMJD7-PLA2G4BH0Y9G9 81 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 IGKV3-15P01624 115 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 MFAP2P55001 183 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 NTHL1P78549 312 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 MPV17LQ2QL34 196 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 C11orf87Q6NUJ2 197 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 ZAR1Q86SH2 424 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 OSR2Q8N2R0 312 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 AMER3Q8N944 861 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM174Q8WUU8 243 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 GTF3AQ92664 365 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms