RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 ARL11Q969Q4 196 aa11.52□□□□□ -0.57
MCF2L-210ENST00000409954 SMIM19Q96E16 107 aa11.52□□□□□ -0.57
MCF2L-210ENST00000409954 TMEM80Q96HE8 168 aa11.52□□□□□ -0.57
MCF2L-210ENST00000409954 SPACA1Q9HBV2 294 aa11.52□□□□□ -0.57
MCF2L-210ENST00000409954 C8orf4Q9NR00 106 aa11.52□□□□□ -0.57
MCF2L-210ENST00000409954 CKLFQ9UBR5 152 aa11.52□□□□□ -0.57
MCF2L-210ENST00000409954 DIMT1Q9UNQ2 313 aaKnown RBP11.52□□□□□ -0.57
MCF2L-210ENST00000409954 PRKDCP78527 4128 aaKnown RBP11.52□□□□□ -0.57
MCF2L-210ENST00000409954 A0A1W2PPI3 338 aa11.51□□□□□ -0.57
MCF2L-210ENST00000409954 SH2D7A6NKC9 451 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-210ENST00000409954 GEMIN2O14893 280 aaKnown RBP11.51□□□□□ -0.57
MCF2L-210ENST00000409954 MT-ND4P03905 459 aa11.51□□□□□ -0.57
MCF2L-210ENST00000409954 SLC35B1P78383 322 aa11.51□□□□□ -0.57
MCF2L-210ENST00000409954 ZNF816Q0VGE8 651 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-210ENST00000409954 RIPK1Q13546 671 aa11.51□□□□□ -0.57
MCF2L-210ENST00000409954 LTC4SQ16873 150 aa11.51□□□□□ -0.57
MCF2L-210ENST00000409954 YIF1BQ5BJH7 314 aa11.51□□□□□ -0.57
MCF2L-210ENST00000409954 OR2G6Q5TZ20 316 aa11.51□□□□□ -0.57
MCF2L-210ENST00000409954 XAF1Q6GPH4 301 aa11.51□□□□□ -0.57
MCF2L-210ENST00000409954 STX19Q8N4C7 294 aa11.51□□□□□ -0.57
MCF2L-210ENST00000409954 C5orf56Q8N8D9 126 aa11.51□□□□□ -0.57
MCF2L-210ENST00000409954 GHSRQ92847 366 aa11.51□□□□□ -0.57
MCF2L-210ENST00000409954 SERPINE3A8MV23 424 aa11.5□□□□□ -0.57
MCF2L-210ENST00000409954 MCRIP1C9JLW8 97 aa11.5□□□□□ -0.57
MCF2L-210ENST00000409954 IGHG2P01859 326 aa11.5□□□□□ -0.57
MCF2L-210ENST00000409954 IGFBP3P17936 291 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-210ENST00000409954 IL3RAP26951 378 aa11.5□□□□□ -0.57
MCF2L-210ENST00000409954 SSTR5P35346 364 aa11.5□□□□□ -0.57
MCF2L-210ENST00000409954 HNF4GQ14541 408 aa11.5□□□□□ -0.57
MCF2L-210ENST00000409954 Q499Y3 187 aa11.5□□□□□ -0.57
MCF2L-210ENST00000409954 KHDC1LQ5JSQ8 128 aa11.5□□□□□ -0.57
MCF2L-210ENST00000409954 ATAD3CQ5T2N8 411 aa11.5□□□□□ -0.57
MCF2L-210ENST00000409954 DMKNQ6E0U4 476 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-210ENST00000409954 C10orf99Q6UWK7 81 aa11.5□□□□□ -0.57
MCF2L-210ENST00000409954 MOB3BQ86TA1 216 aa11.5□□□□□ -0.57
MCF2L-210ENST00000409954 FOXRED2Q8IWF2 684 aa11.5□□□□□ -0.57
MCF2L-210ENST00000409954 SETD9Q8NE22 299 aa11.5□□□□□ -0.57
MCF2L-210ENST00000409954 ZNF184Q99676 751 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-210ENST00000409954 MCRIP2Q9BUT9 160 aaKnown RBP11.5□□□□□ -0.57
MCF2L-210ENST00000409954 GON7Q9BXV9 100 aa11.5□□□□□ -0.57
MCF2L-210ENST00000409954 ZMAT5Q9UDW3 170 aaKnown RBP11.5□□□□□ -0.57
MCF2L-210ENST00000409954 SIRT4Q9Y6E7 314 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-210ENST00000409954 IGHV1-3A0A0C4DH29 117 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 TRBV5-5A0A0J9YX44 114 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 C15orf65H3BRN8 121 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 SDCBPO00560 298 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-210ENST00000409954 HSD17B6O14756 317 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 IGKV1D-33P01593 117 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 IGKV1-33P01594 117 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 GLAP06280 429 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 SERPINA2P20848 420 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 CD1BP29016 333 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 GNG10P50151 68 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 DIAPH2-AS1Q14236 149 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 TMEM30BQ3MIR4 351 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 SLC22A6Q4U2R8 563 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 STEAP3Q658P3 488 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 ZNF497Q6ZNH5 498 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 SLC35E3Q7Z769 313 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 ZNF329Q86UD4 541 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 TGIF2LXQ8IUE1 241 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 OR2T10Q8NGZ9 312 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 NEK7Q8TDX7 302 aa11.49□□□□□ -0.57
MCF2L-210ENST00000409954 TRAV39A0A0B4J263 110 aa11.48□□□□□ -0.57
MCF2L-210ENST00000409954 NCBP2LA6PVI3 153 aaKnown RBP11.48□□□□□ -0.57
MCF2L-210ENST00000409954 SPINT2O43291 252 aa11.48□□□□□ -0.57
MCF2L-210ENST00000409954 CA11O75493 328 aa11.48□□□□□ -0.57
MCF2L-210ENST00000409954 MPIG6BO95866 241 aa11.48□□□□□ -0.57
MCF2L-210ENST00000409954 MYCNOSP40205 109 aa11.48□□□□□ -0.57
MCF2L-210ENST00000409954 THBS3P49746 956 aa11.48□□□□□ -0.57
MCF2L-210ENST00000409954 TAS2R43P59537 309 aa11.48□□□□□ -0.57
MCF2L-210ENST00000409954 RPL23AP62750 156 aaKnown RBP11.48□□□□□ -0.57
MCF2L-210ENST00000409954 TEX38Q6PEX7 206 aa11.48□□□□□ -0.57
MCF2L-210ENST00000409954 DHRSXQ8N5I4 330 aa11.48□□□□□ -0.57
MCF2L-210ENST00000409954 PACRGLQ8N7B6 248 aa11.48□□□□□ -0.57
MCF2L-210ENST00000409954 LINC00482Q8N8I6 264 aa11.48□□□□□ -0.57
MCF2L-210ENST00000409954 OR8H1Q8NGG4 311 aa11.48□□□□□ -0.57
MCF2L-210ENST00000409954 CCDC107Q8WV48 283 aa11.48□□□□□ -0.57
MCF2L-210ENST00000409954 DPF1Q92782 380 aa11.48□□□□□ -0.57
MCF2L-210ENST00000409954 EAF1Q96JC9 268 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-210ENST00000409954 GFOD1Q9NXC2 390 aa11.48□□□□□ -0.57
MCF2L-210ENST00000409954 CLEC2DQ9UHP7 191 aa11.48□□□□□ -0.57
MCF2L-210ENST00000409954 TRAPPC2LQ9UL33 140 aa11.48□□□□□ -0.57
MCF2L-210ENST00000409954 A0A1W2PPE3 182 aa11.47□□□□□ -0.57
MCF2L-210ENST00000409954 FAM90A10PA6NDY2 464 aa11.47□□□□□ -0.57
MCF2L-210ENST00000409954 FAM90A7PA6NKC0 464 aa11.47□□□□□ -0.57
MCF2L-210ENST00000409954 FAM90A23PA8MXZ1 464 aa11.47□□□□□ -0.57
MCF2L-210ENST00000409954 AIPO00170 330 aa11.47□□□□□ -0.57
MCF2L-210ENST00000409954 AP4M1O00189 453 aa11.47□□□□□ -0.57
MCF2L-210ENST00000409954 TXNL1O43396 289 aa11.47□□□□□ -0.57
MCF2L-210ENST00000409954 LALBAP00709 142 aa11.47□□□□□ -0.57
MCF2L-210ENST00000409954 CD1AP06126 327 aa11.47□□□□□ -0.57
MCF2L-210ENST00000409954 RPS11P62280 158 aaKnown RBP eCLIP11.47□□□□□ -0.57
MCF2L-210ENST00000409954 EGFEM1PQ0D2K5 195 aa11.47□□□□□ -0.57
MCF2L-210ENST00000409954 ST3GAL4Q11206 333 aa11.47□□□□□ -0.57
MCF2L-210ENST00000409954 PNLIPRP3Q17RR3 467 aa11.47□□□□□ -0.57
MCF2L-210ENST00000409954 DEFB121Q5J5C9 76 aa11.47□□□□□ -0.57
MCF2L-210ENST00000409954 SYT6Q5T7P8 510 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-210ENST00000409954 TRAT1Q6PIZ9 186 aa11.47□□□□□ -0.57
MCF2L-210ENST00000409954 UNQ9370/PRO34162Q6UXP9 181 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms