RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 HNF4GQ14541 408 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 ZNF260Q3ZCT1 412 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 ZNF529Q6P280 563 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 SLC16A12Q6ZSM3 486 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 DHRSXQ8N5I4 330 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 PARP16Q8N5Y8 322 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 OR5AK2Q8NH90 309 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 NRG4Q8WWG1 115 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 COMMD4Q9H0A8 199 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 ZCCHC4Q9H5U6 513 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 SCOCQ9UIL1 159 aa9.65□□□□□ -0.86
APOBEC3B-204ENST00000407298 SORL1Q92673 2214 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 NCBP2LA6PVI3 153 aaKnown RBP9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 CCRL2O00421 344 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 DEGS1O15121 323 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 KDM4BO94953 1096 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 IGKV1D-33P01593 117 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 IGKV1-33P01594 117 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 RPLP1P05386 114 aaKnown RBP9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 CALCBP10092 127 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 GBX2P52951 348 aaPredicted RBP9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 C17orf58Q2M2W7 97 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 CCDC58Q4VC31 144 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 FAM27D1Q5T7N8 215 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 TGIF2LXQ8IUE1 241 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 RNF152Q8N8N0 203 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 SETD9Q8NE22 299 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 OR51A2Q8NGJ7 313 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 OR5D18Q8NGL1 313 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 OR10X1Q8NGY0 326 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 GGHQ92820 318 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 KIRREL1Q96J84 757 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 ABCG5Q9H222 651 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 NCOR1P1Q9H4R4 102 aa9.64□□□□□ -0.87
APOBEC3B-204ENST00000407298 A0A1W2PPI3 338 aa9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 OGG1O15527 345 aa9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 SULT1B1O43704 296 aa9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 GPR12P47775 334 aa9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 DEFB136Q30KP8 78 aa9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 RPL22L1Q6P5R6 122 aaKnown RBP9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 SAXO1Q8IYX7 474 aa9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 OR13C5Q8NGS8 318 aa9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 OR52N1Q8NH53 320 aa9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 C4orf3Q8WVX3 66 aa9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 TSEN15Q8WW01 171 aaKnown RBP9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 COQ2Q96H96 371 aa9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 PGLYRP3Q96LB9 341 aa9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 MYCBPQ99417 103 aaPredicted RBP9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 BARHL1Q9BZE3 327 aa9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 LIN7CQ9NUP9 197 aaKnown RBP9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 FKBP14Q9NWM8 211 aa9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 ING3Q9NXR8 418 aa9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 CALYQ9NYX4 217 aa9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 IDI2-AS1Q9NZ38 188 aa9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 DHDHQ9UQ10 334 aa9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 PSG11Q9UQ72 335 aa9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 EXOSC1Q9Y3B2 195 aaKnown RBP9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 RYR2Q92736 4967 aa9.63□□□□□ -0.87
APOBEC3B-204ENST00000407298 IRGMA1A4Y4 181 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 SLC33A1O00400 549 aaPredicted RBP9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 GAPDHP04406 335 aaKnown RBP9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 OR8U8P0C7N1 319 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 GLP1RP43220 463 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 SOX2P48431 317 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 RPS11P62280 158 aaKnown RBP eCLIP9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 GABPB1Q06547 395 aaPredicted RBP9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 ST3GAL4Q11206 333 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 EBI3Q14213 229 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 KISS1Q15726 138 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 DMKNQ6E0U4 476 aaPredicted RBP9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 MOB3BQ86TA1 216 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 ZNF429Q86V71 674 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 SBSPONQ8IVN8 264 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 C8orf59Q8N0T1 100 aaPredicted RBP9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 OR10A7Q8NGE5 316 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 OR2T10Q8NGZ9 312 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 ORAI1Q96D31 301 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 SMIM19Q96E16 107 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 TMEM80Q96HE8 168 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 RASL11BQ9BPW5 248 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 LINC00574Q9H8X3 128 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 PLCXD1Q9NUJ7 323 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 BABAM2Q9NXR7 383 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 TAS2R4Q9NYW5 299 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 PSORS1C1Q9UIG5 152 aa9.62□□□□□ -0.87
APOBEC3B-204ENST00000407298 MEIKINA0A087WXM9 373 aa9.61□□□□□ -0.87
APOBEC3B-204ENST00000407298 TRBV5-5A0A0J9YX44 114 aa9.61□□□□□ -0.87
APOBEC3B-204ENST00000407298 LINC01548A6NM66 108 aa9.61□□□□□ -0.87
APOBEC3B-204ENST00000407298 GABRPO00591 440 aa9.61□□□□□ -0.87
APOBEC3B-204ENST00000407298 IL1AP01583 271 aa9.61□□□□□ -0.87
APOBEC3B-204ENST00000407298 OR5H8P0DN80 308 aa9.61□□□□□ -0.87
APOBEC3B-204ENST00000407298 CGB3P0DN86 165 aa9.61□□□□□ -0.87
APOBEC3B-204ENST00000407298 CGB7P0DN87 165 aa9.61□□□□□ -0.87
APOBEC3B-204ENST00000407298 MYL12AP19105 171 aa9.61□□□□□ -0.87
APOBEC3B-204ENST00000407298 VDAC1P21796 283 aa9.61□□□□□ -0.87
APOBEC3B-204ENST00000407298 AQP4P55087 323 aa9.61□□□□□ -0.87
APOBEC3B-204ENST00000407298 ZNF816Q0VGE8 651 aaPredicted RBP9.61□□□□□ -0.87
APOBEC3B-204ENST00000407298 ATXN7L3Q14CW9 347 aaPredicted RBP9.61□□□□□ -0.87
APOBEC3B-204ENST00000407298 Q6P435 159 aa9.61□□□□□ -0.87
APOBEC3B-204ENST00000407298 TMPRSS11AQ6ZMR5 421 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms