RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 MEF2CQ06413 473 aaPredicted RBP12.78□□□□□ -0.36
CUX2-202ENST00000397643 GDPD3Q7L5L3 318 aa12.78□□□□□ -0.36
CUX2-202ENST00000397643 SATL1Q86VE3 508 aa12.78□□□□□ -0.36
CUX2-202ENST00000397643 ANGPTL5Q86XS5 388 aa12.78□□□□□ -0.36
CUX2-202ENST00000397643 CDH26Q8IXH8 852 aa12.78□□□□□ -0.36
CUX2-202ENST00000397643 OSR2Q8N2R0 312 aa12.78□□□□□ -0.36
CUX2-202ENST00000397643 NKAIN3Q8N8D7 197 aa12.78□□□□□ -0.36
CUX2-202ENST00000397643 OR52N4Q8NGI2 321 aa12.78□□□□□ -0.36
CUX2-202ENST00000397643 AKR1E2Q96JD6 320 aa12.78□□□□□ -0.36
CUX2-202ENST00000397643 RBM14Q96PK6 669 aaKnown RBP12.78□□□□□ -0.36
CUX2-202ENST00000397643 GPER1Q99527 375 aa12.78□□□□□ -0.36
CUX2-202ENST00000397643 LYSTQ99698 3801 aa12.77□□□□□ -0.36
CUX2-202ENST00000397643 CYB5AP00167 134 aa12.77□□□□□ -0.37
CUX2-202ENST00000397643 ZNF93P35789 620 aaPredicted RBP12.77□□□□□ -0.37
CUX2-202ENST00000397643 MTNR1BP49286 362 aa12.77□□□□□ -0.37
CUX2-202ENST00000397643 PSMD7P51665 324 aa12.77□□□□□ -0.37
CUX2-202ENST00000397643 IL24Q13007 206 aa12.77□□□□□ -0.37
CUX2-202ENST00000397643 KISS1Q15726 138 aa12.77□□□□□ -0.37
CUX2-202ENST00000397643 GLT8D1Q68CQ7 371 aa12.77□□□□□ -0.37
CUX2-202ENST00000397643 BAIAP2L2Q6UXY1 529 aa12.77□□□□□ -0.37
CUX2-202ENST00000397643 C18orf65Q6ZTR6 163 aa12.77□□□□□ -0.37
CUX2-202ENST00000397643 LRRTM1Q86UE6 522 aa12.77□□□□□ -0.37
CUX2-202ENST00000397643 CLVS1Q8IUQ0 354 aaPredicted RBP12.77□□□□□ -0.37
CUX2-202ENST00000397643 TPRX1Q8N7U7 411 aa12.77□□□□□ -0.37
CUX2-202ENST00000397643 SPACA5Q96QH8 159 aa12.77□□□□□ -0.37
CUX2-202ENST00000397643 CENPOQ9BU64 300 aa12.77□□□□□ -0.37
CUX2-202ENST00000397643 PKIBQ9C010 78 aa12.77□□□□□ -0.37
CUX2-202ENST00000397643 LSM4Q9Y4Z0 139 aaKnown RBP12.77□□□□□ -0.37
CUX2-202ENST00000397643 LINC00312Q9Y6C7 94 aa12.77□□□□□ -0.37
CUX2-202ENST00000397643 IGKV1-27A0A075B6S5 117 aa12.76□□□□□ -0.37
CUX2-202ENST00000397643 hADV38S2A0JD32 116 aa12.76□□□□□ -0.37
CUX2-202ENST00000397643 C3orf84H3BNL1 204 aa12.76□□□□□ -0.37
CUX2-202ENST00000397643 NOL3O60936 208 aaKnown RBP12.76□□□□□ -0.37
CUX2-202ENST00000397643 GABARAPO95166 117 aa12.76□□□□□ -0.37
CUX2-202ENST00000397643 POU3F4P49335 361 aa12.76□□□□□ -0.37
CUX2-202ENST00000397643 LSM3P62310 102 aaKnown RBP12.76□□□□□ -0.37
CUX2-202ENST00000397643 RPL23AP62750 156 aaKnown RBP12.76□□□□□ -0.37
CUX2-202ENST00000397643 EDDM3AQ14507 147 aa12.76□□□□□ -0.37
CUX2-202ENST00000397643 TPRA1Q86W33 373 aa12.76□□□□□ -0.37
CUX2-202ENST00000397643 JAGN1Q8N5M9 183 aa12.76□□□□□ -0.37
CUX2-202ENST00000397643 OR51D1Q8NGF3 324 aa12.76□□□□□ -0.37
CUX2-202ENST00000397643 RFT1Q96AA3 541 aa12.76□□□□□ -0.37
CUX2-202ENST00000397643 SNX22Q96L94 193 aa12.76□□□□□ -0.37
CUX2-202ENST00000397643 P2RX4Q99571 388 aa12.76□□□□□ -0.37
CUX2-202ENST00000397643 MCRIP2Q9BUT9 160 aaKnown RBP12.76□□□□□ -0.37
CUX2-202ENST00000397643 MTCH1Q9NZJ7 389 aa12.76□□□□□ -0.37
CUX2-202ENST00000397643 DPM3Q9P2X0 92 aa12.76□□□□□ -0.37
CUX2-202ENST00000397643 PSMB11A5LHX3 300 aa12.75□□□□□ -0.37
CUX2-202ENST00000397643 H3BUI4 141 aa12.75□□□□□ -0.37
CUX2-202ENST00000397643 IGLV1-47P01700 117 aa12.75□□□□□ -0.37
CUX2-202ENST00000397643 TMEM225BP0DP42 221 aa12.75□□□□□ -0.37
CUX2-202ENST00000397643 RANBP1P43487 201 aa12.75□□□□□ -0.37
CUX2-202ENST00000397643 DGCR2P98153 550 aa12.75□□□□□ -0.37
CUX2-202ENST00000397643 PDZK1IP1Q13113 114 aa12.75□□□□□ -0.37
CUX2-202ENST00000397643 C8orf86Q6ZUL3 223 aa12.75□□□□□ -0.37
CUX2-202ENST00000397643 OR2W3Q7Z3T1 314 aa12.75□□□□□ -0.37
CUX2-202ENST00000397643 TNFAIP8L1Q8WVP5 186 aa12.75□□□□□ -0.37
CUX2-202ENST00000397643 UQCC2Q9BRT2 126 aa12.75□□□□□ -0.37
CUX2-202ENST00000397643 RNF167Q9H6Y7 350 aa12.75□□□□□ -0.37
CUX2-202ENST00000397643 IL36RNQ9UBH0 155 aa12.75□□□□□ -0.37
CUX2-202ENST00000397643 AK6Q9Y3D8 172 aaKnown RBP12.75□□□□□ -0.37
CUX2-202ENST00000397643 PSPNO60542 156 aa12.74□□□□□ -0.37
CUX2-202ENST00000397643 CDRT1O95170 752 aa12.74□□□□□ -0.37
CUX2-202ENST00000397643 RAB3BP20337 219 aa12.74□□□□□ -0.37
CUX2-202ENST00000397643 BRS3P32247 399 aa12.74□□□□□ -0.37
CUX2-202ENST00000397643 PTGFRP43088 359 aa12.74□□□□□ -0.37
CUX2-202ENST00000397643 TMBIM6P55061 237 aa12.74□□□□□ -0.37
CUX2-202ENST00000397643 SLC16A12Q6ZSM3 486 aa12.74□□□□□ -0.37
CUX2-202ENST00000397643 SLC25A26Q70HW3 274 aa12.74□□□□□ -0.37
CUX2-202ENST00000397643 ZNF329Q86UD4 541 aa12.74□□□□□ -0.37
CUX2-202ENST00000397643 SAXO1Q8IYX7 474 aa12.74□□□□□ -0.37
CUX2-202ENST00000397643 OR5D18Q8NGL1 313 aa12.74□□□□□ -0.37
CUX2-202ENST00000397643 RAB2BQ8WUD1 216 aa12.74□□□□□ -0.37
CUX2-202ENST00000397643 CAPSLQ8WWF8 208 aa12.74□□□□□ -0.37
CUX2-202ENST00000397643 CEP19Q96LK0 163 aa12.74□□□□□ -0.37
CUX2-202ENST00000397643 S100A13Q99584 98 aa12.74□□□□□ -0.37
CUX2-202ENST00000397643 BCL7BQ9BQE9 202 aa12.74□□□□□ -0.37
CUX2-202ENST00000397643 FAM192AQ9GZU8 254 aa12.74□□□□□ -0.37
CUX2-202ENST00000397643 CHST6Q9GZX3 395 aa12.74□□□□□ -0.37
CUX2-202ENST00000397643 NAA50Q9GZZ1 169 aaKnown RBP12.74□□□□□ -0.37
CUX2-202ENST00000397643 V9GY05 133 aa12.74□□□□□ -0.37
CUX2-202ENST00000397643 SHISA3A0PJX4 238 aa12.73□□□□□ -0.37
CUX2-202ENST00000397643 LMO1P25800 156 aa12.73□□□□□ -0.37
CUX2-202ENST00000397643 SDC2P34741 201 aa12.73□□□□□ -0.37
CUX2-202ENST00000397643 ZP1P60852 638 aa12.73□□□□□ -0.37
CUX2-202ENST00000397643 VBP1P61758 197 aa12.73□□□□□ -0.37
CUX2-202ENST00000397643 NCS1P62166 190 aa12.73□□□□□ -0.37
CUX2-202ENST00000397643 CTF1Q16619 201 aa12.73□□□□□ -0.37
CUX2-202ENST00000397643 PRAMEF5Q5TYX0 476 aa12.73□□□□□ -0.37
CUX2-202ENST00000397643 ABHD12Q8N2K0 398 aa12.73□□□□□ -0.37
CUX2-202ENST00000397643 SLAMF9Q96A28 289 aa12.73□□□□□ -0.37
CUX2-202ENST00000397643 SEBOXQ9HB31 216 aaPredicted RBP12.73□□□□□ -0.37
CUX2-202ENST00000397643 PLGRKTQ9HBL7 147 aa12.73□□□□□ -0.37
CUX2-202ENST00000397643 ING4Q9UNL4 249 aa12.73□□□□□ -0.37
CUX2-202ENST00000397643 CCDC160A6NGH7 325 aa12.72□□□□□ -0.37
CUX2-202ENST00000397643 HAND1O96004 215 aa12.72□□□□□ -0.37
CUX2-202ENST00000397643 CD37P11049 281 aa12.72□□□□□ -0.37
CUX2-202ENST00000397643 CD34P28906 385 aa12.72□□□□□ -0.37
CUX2-202ENST00000397643 GDNFP39905 211 aa12.72□□□□□ -0.37
CUX2-202ENST00000397643 MYCNOSP40205 109 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms