RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 TPRX1Q8N7U7 411 aa13.02□□□□□ -0.33
CLTA-203ENST00000396603 CHST6Q9GZX3 395 aa13.02□□□□□ -0.33
CLTA-203ENST00000396603 GHRLQ9UBU3 117 aa13.02□□□□□ -0.33
CLTA-203ENST00000396603 NOTCH3Q9UM47 2321 aa13.01□□□□□ -0.33
CLTA-203ENST00000396603 TCRBV4S1A1TA0A5B7 111 aa13.01□□□□□ -0.33
CLTA-203ENST00000396603 PF4P02776 101 aa13.01□□□□□ -0.33
CLTA-203ENST00000396603 UBBP0CG47 229 aa13.01□□□□□ -0.33
CLTA-203ENST00000396603 MYL9P24844 172 aa13.01□□□□□ -0.33
CLTA-203ENST00000396603 OR3A4PP47883 348 aa13.01□□□□□ -0.33
CLTA-203ENST00000396603 SSX1Q16384 188 aa13.01□□□□□ -0.33
CLTA-203ENST00000396603 TMEM95Q3KNT9 176 aa13.01□□□□□ -0.33
CLTA-203ENST00000396603 SYT6Q5T7P8 510 aaPredicted RBP13.01□□□□□ -0.33
CLTA-203ENST00000396603 ORAI1Q96D31 301 aa13.01□□□□□ -0.33
CLTA-203ENST00000396603 MRPS24Q96EL2 167 aaKnown RBP13.01□□□□□ -0.33
CLTA-203ENST00000396603 SLC25A33Q9BSK2 321 aa13.01□□□□□ -0.33
CLTA-203ENST00000396603 IL36RNQ9UBH0 155 aa13.01□□□□□ -0.33
CLTA-203ENST00000396603 ING4Q9UNL4 249 aa13.01□□□□□ -0.33
CLTA-203ENST00000396603 GSTK1Q9Y2Q3 226 aa13.01□□□□□ -0.33
CLTA-203ENST00000396603 MRPS28Q9Y2Q9 187 aaKnown RBP13.01□□□□□ -0.33
CLTA-203ENST00000396603 IGKV1-12A0A0C4DH73 117 aa13□□□□□ -0.33
CLTA-203ENST00000396603 TRDV1A0A1B0GX56 115 aa13□□□□□ -0.33
CLTA-203ENST00000396603 MEX3AA1L020 520 aaKnown RBP13□□□□□ -0.33
CLTA-203ENST00000396603 PDCD5O14737 125 aa13□□□□□ -0.33
CLTA-203ENST00000396603 OR2H2O95918 312 aa13□□□□□ -0.33
CLTA-203ENST00000396603 IGKV1D-12P01611 117 aa13□□□□□ -0.33
CLTA-203ENST00000396603 GTF2F2P13984 249 aa13□□□□□ -0.33
CLTA-203ENST00000396603 IGLL1P15814 213 aa13□□□□□ -0.33
CLTA-203ENST00000396603 CDK2P24941 298 aa13□□□□□ -0.33
CLTA-203ENST00000396603 CALRP27797 417 aaKnown RBP13□□□□□ -0.33
CLTA-203ENST00000396603 SLC6A1P30531 599 aa13□□□□□ -0.33
CLTA-203ENST00000396603 MNDAP41218 407 aa13□□□□□ -0.33
CLTA-203ENST00000396603 PRRX1P54821 245 aa13□□□□□ -0.33
CLTA-203ENST00000396603 FABP5Q01469 135 aa13□□□□□ -0.33
CLTA-203ENST00000396603 IL13RA2Q14627 380 aa13□□□□□ -0.33
CLTA-203ENST00000396603 INSL4Q14641 139 aa13□□□□□ -0.33
CLTA-203ENST00000396603 NEDD8Q15843 81 aa13□□□□□ -0.33
CLTA-203ENST00000396603 HLA-DRB5Q30154 266 aa13□□□□□ -0.33
CLTA-203ENST00000396603 TIMM50Q3ZCQ8 353 aa13□□□□□ -0.33
CLTA-203ENST00000396603 TCTEX1D4Q5JR98 221 aa13□□□□□ -0.33
CLTA-203ENST00000396603 AWAT2Q6E213 333 aa13□□□□□ -0.33
CLTA-203ENST00000396603 CD200R1LQ6Q8B3 271 aa13□□□□□ -0.33
CLTA-203ENST00000396603 TMEM91Q6ZNR0 172 aa13□□□□□ -0.33
CLTA-203ENST00000396603 LINC00596Q86U02 117 aa13□□□□□ -0.33
CLTA-203ENST00000396603 NCOR1P1Q9H4R4 102 aa13□□□□□ -0.33
CLTA-203ENST00000396603 SSR3Q9UNL2 185 aa13□□□□□ -0.33
CLTA-203ENST00000396603 ZNF729A6NN14 1252 aaPredicted RBP12.99□□□□□ -0.33
CLTA-203ENST00000396603 BUB1B-PAK6H3BSN5 160 aa12.99□□□□□ -0.33
CLTA-203ENST00000396603 TOR1AO14656 332 aa12.99□□□□□ -0.33
CLTA-203ENST00000396603 MMP23AO75900 390 aa12.99□□□□□ -0.33
CLTA-203ENST00000396603 HTR3BO95264 441 aa12.99□□□□□ -0.33
CLTA-203ENST00000396603 JUNBP17275 347 aaPredicted RBP12.99□□□□□ -0.33
CLTA-203ENST00000396603 EGFEM1PQ0D2K5 195 aa12.99□□□□□ -0.33
CLTA-203ENST00000396603 DCTN2Q13561 401 aaKnown RBP12.99□□□□□ -0.33
CLTA-203ENST00000396603 NHLRC3Q5JS37 347 aa12.99□□□□□ -0.33
CLTA-203ENST00000396603 VAX1Q5SQQ9 334 aa12.99□□□□□ -0.33
CLTA-203ENST00000396603 FAM27D1Q5T7N8 215 aa12.99□□□□□ -0.33
CLTA-203ENST00000396603 THNSL2Q86YJ6 484 aa12.99□□□□□ -0.33
CLTA-203ENST00000396603 OSR2Q8N2R0 312 aa12.99□□□□□ -0.33
CLTA-203ENST00000396603 Q8NFD4 153 aa12.99□□□□□ -0.33
CLTA-203ENST00000396603 OR4D6Q8NGJ1 314 aa12.99□□□□□ -0.33
CLTA-203ENST00000396603 OR51T1Q8NGJ9 327 aa12.99□□□□□ -0.33
CLTA-203ENST00000396603 MUL1Q969V5 352 aa12.99□□□□□ -0.33
CLTA-203ENST00000396603 CST11Q9H112 138 aa12.99□□□□□ -0.33
CLTA-203ENST00000396603 OR6C3Q9NZP0 311 aa12.99□□□□□ -0.33
CLTA-203ENST00000396603 STUB1Q9UNE7 303 aa12.99□□□□□ -0.33
CLTA-203ENST00000396603 TRAV1-2A0A0B4J238 106 aa12.98□□□□□ -0.33
CLTA-203ENST00000396603 ODAMA1E959 279 aa12.98□□□□□ -0.33
CLTA-203ENST00000396603 MAGEA13PA6NCF6 341 aa12.98□□□□□ -0.33
CLTA-203ENST00000396603 LY6LH3BQJ8 138 aa12.98□□□□□ -0.33
CLTA-203ENST00000396603 SIRPB1O00241 398 aa12.98□□□□□ -0.33
CLTA-203ENST00000396603 DEGS1O15121 323 aa12.98□□□□□ -0.33
CLTA-203ENST00000396603 CDRT1O95170 752 aa12.98□□□□□ -0.33
CLTA-203ENST00000396603 LPLP06858 475 aa12.98□□□□□ -0.33
CLTA-203ENST00000396603 FAM106CPP0CH98 169 aa12.98□□□□□ -0.33
CLTA-203ENST00000396603 ZNF44P15621 663 aa12.98□□□□□ -0.33
CLTA-203ENST00000396603 DUSP1P28562 367 aa12.98□□□□□ -0.33
CLTA-203ENST00000396603 SNU13P55769 128 aaKnown RBP12.98□□□□□ -0.33
CLTA-203ENST00000396603 PAX5Q02548 391 aa12.98□□□□□ -0.33
CLTA-203ENST00000396603 SLC22A6Q4U2R8 563 aa12.98□□□□□ -0.33
CLTA-203ENST00000396603 ABCA11PQ4W5N1 156 aa12.98□□□□□ -0.33
CLTA-203ENST00000396603 TPTE2P1Q5T6R2 138 aa12.98□□□□□ -0.33
CLTA-203ENST00000396603 PRAMEF5Q5TYX0 476 aa12.98□□□□□ -0.33
CLTA-203ENST00000396603 GLIPR1L1Q6UWM5 242 aa12.98□□□□□ -0.33
CLTA-203ENST00000396603 LRRTM1Q86UE6 522 aa12.98□□□□□ -0.33
CLTA-203ENST00000396603 AMMECR1Q9Y4X0 333 aaPredicted RBP12.98□□□□□ -0.33
CLTA-203ENST00000396603 A0A1W2PRX2 142 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 FAM90A18PA6NE21 464 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 FAM90A16PA6NEW6 464 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 FAM90A20PA6NIJ5 464 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 FAM90A9PA6NNJ1 464 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 FAM90A12PA8MX19 464 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 FAM90A5PA8MXJ8 464 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 MPIG6BO95866 241 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 AMY1AP04745 511 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 AMY2AP04746 511 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 FAM90A15PP0C7V4 464 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 FAM90A13PP0C7W8 464 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 FAM90A14PP0C7W9 464 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 FAM90A24PP0C7X0 464 aa12.97□□□□□ -0.33
CLTA-203ENST00000396603 SERPINA2P20848 420 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms