RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ZNF587BE7ETH6 402 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 SOD3P08294 240 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 ZNF32P17041 273 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 PSG4Q00888 419 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 ZNF92Q03936 586 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 ACSF3Q4G176 576 aaPredicted RBP11.42□□□□□ -0.58
TRIM40-207ENST00000396581 RAET1LQ5VY80 246 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 CALHM1Q8IU99 346 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 CMTM1Q8IZ96 169 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 OR5D13Q8NGL4 314 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 DDA1Q9BW61 102 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 SPRY4Q9C004 299 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 P4HTMQ9NXG6 502 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 SHANK1Q9Y566 2161 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 IGHV1-45A0A0A0MS14 117 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 SLC22A20A6NK97 555 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 PRR33A8MZF0 331 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 H0Y980 276 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 PPP1R2P9O14990 202 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 NDUFS6O75380 124 aaKnown RBP11.42□□□□□ -0.58
TRIM40-207ENST00000396581 CST7O76096 145 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 TRGC2P03986 189 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 SLC25A6P12236 298 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 NTF4P34130 210 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 RPL23AP62750 156 aaKnown RBP11.42□□□□□ -0.58
TRIM40-207ENST00000396581 RUNX1Q01196 453 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 PDCD1Q15116 288 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 H1FOOQ8IZA3 346 aaPredicted RBP11.42□□□□□ -0.58
TRIM40-207ENST00000396581 M1APQ8TC57 530 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 ABHD5Q8WTS1 349 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 CPNE4Q96A23 557 aaPredicted RBP11.42□□□□□ -0.58
TRIM40-207ENST00000396581 IMMP1LQ96LU5 166 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 JSRP1Q96MG2 331 aaPredicted RBP11.42□□□□□ -0.58
TRIM40-207ENST00000396581 MAGT1Q9H0U3 335 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 WNT5BQ9H1J7 359 aa11.42□□□□□ -0.58
TRIM40-207ENST00000396581 CISD1Q9NZ45 108 aaKnown RBP11.42□□□□□ -0.58
TRIM40-207ENST00000396581 TNFSF11O14788 317 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 CYB5BO43169 146 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 CHST1O43916 411 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 DFFBO76075 338 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 PTBP3O95758 552 aaKnown RBP11.41□□□□□ -0.58
TRIM40-207ENST00000396581 TK1P04183 234 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 WNT2P09544 360 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 CCL3P10147 92 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 PAX1P15863 534 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 PRSS12P56730 875 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 CLDN15P56746 228 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 RAC3P60763 192 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 DEFA6Q01524 100 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 HERPUD1Q15011 391 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 ZNF295-AS1Q8N0V1 137 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 GAPTQ8N292 157 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 ZNF611Q8N823 705 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 OR10D4PQ8NGN7 298 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 EXTL1Q92935 676 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 OR2H1Q9GZK4 316 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 CRLF2Q9HC73 371 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 TAAR3PQ9P1P4 343 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 URGCP-MRPS24S4R325 110 aa11.41□□□□□ -0.58
TRIM40-207ENST00000396581 IGKV1D-13A0A0B4J2D9 117 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 A0A1B0GU03 582 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 KIAA1324LA8MWY0 1029 aaPredicted RBP11.4□□□□□ -0.58
TRIM40-207ENST00000396581 OR7C1O76099 320 aaPredicted RBP11.4□□□□□ -0.58
TRIM40-207ENST00000396581 IGKV1-13P0DP09 117 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 COX6A1P12074 109 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 NKX6-1P78426 367 aaPredicted RBP11.4□□□□□ -0.58
TRIM40-207ENST00000396581 PLCXD3Q63HM9 321 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 SAXO1Q8IYX7 474 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 MBD3L1Q8WWY6 194 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 GFOD1Q9NXC2 390 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 KIAA1549Q9HCM3 1950 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 TRBV24-1A0A075B6N3 115 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 OR5H1A6NKK0 313 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 GJE1A6NN92 205 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 ZNF716A6NP11 495 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 CYB5R3P00387 301 aaPredicted RBP11.4□□□□□ -0.58
TRIM40-207ENST00000396581 MT-CO3P00414 261 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 CTXN2P0C2S0 81 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 TRGC1P0CF51 173 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 RD3LP0DJH9 198 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 EDN3P14138 238 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 CD200P41217 278 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 ZNF154Q13106 437 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 RIPPLY2Q5TAB7 128 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 GFI1BQ5VTD9 330 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 C6orf15Q6UXA7 325 aaPredicted RBP11.4□□□□□ -0.58
TRIM40-207ENST00000396581 FAM210BQ96KR6 192 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 C1QTNF5Q9BXJ0 243 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 GPR61Q9BZJ8 451 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 PRDM14Q9GZV8 571 aa11.4□□□□□ -0.58
TRIM40-207ENST00000396581 EML6Q6ZMW3 1958 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 PIGBOS1A0A0B4J2F0 54 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 A0A1W2PNU3 283 aaPredicted RBP11.39□□□□□ -0.59
TRIM40-207ENST00000396581 CLDN34H7C241 214 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 CELA2AP08217 269 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 SCTP09683 121 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 JMJD7P0C870 316 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 CEBPGP53567 150 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 B3GALT5-AS1P59052 145 aa11.39□□□□□ -0.59
TRIM40-207ENST00000396581 SSTP61278 116 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms