RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 COMMD3Q9UBI1 195 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 PEX16Q9Y5Y5 336 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 A0A0A6YYD4 124 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 A0A0A6YYJ9 748 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 MCRIP1C9JLW8 97 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 RBP4P02753 201 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 CGB3P0DN86 165 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 CGB7P0DN87 165 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 FUT3P21217 361 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 OMGP23515 440 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 GDNFP39905 211 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 PAX5Q02548 391 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 C17orf58Q2M2W7 97 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 PRAMEF5Q5TYX0 476 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 SLC35E4Q6ICL7 350 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 RBMS3Q6XE24 437 aaKnown RBP13.49□□□□□ -0.25
CXCL1-201ENST00000395761 C17orf50Q8WW18 174 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 DYRK2Q92630 601 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 DUX5Q96PT3 197 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 PRDM13Q9H4Q3 707 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 NCOR1P1Q9H4R4 102 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 SPACA1Q9HBV2 294 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 TAS2R3Q9NYW6 316 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 PTTG2Q9NZH5 202 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 OR6C3Q9NZP0 311 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 SESN1Q9Y6P5 492 aa13.49□□□□□ -0.25
CXCL1-201ENST00000395761 UBE2QL1A1L167 161 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 MEIOCA2RUB1 952 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 METTL21EPA6NDL7 271 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 H3BUI4 141 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 CTDSP2O14595 271 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 PDCD6O75340 191 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 APOA1P02647 267 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 CDK2P24941 298 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 SAA4P35542 130 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 GLP1RP43220 463 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 EFNB2P52799 333 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 BAMBIQ13145 260 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 KRTAP24-1Q3LI83 254 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 UBE2NLQ5JXB2 153 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 NKAPLQ5M9Q1 402 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 RTN4RL2Q86UN3 420 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 MRGPRDQ8TDS7 321 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 CCDC107Q8WV48 283 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 ZDHHC16Q969W1 377 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 SLC25A38Q96DW6 304 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 AJUBAQ96IF1 538 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 GAL3ST2Q9H3Q3 398 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 RHBDL2Q9NX52 303 aa13.48□□□□□ -0.25
CXCL1-201ENST00000395761 A0A0A6YYH2 397 aa13.47□□□□□ -0.25
CXCL1-201ENST00000395761 KBTBD11-OT1A0A1B0GTJ5 212 aa13.47□□□□□ -0.25
CXCL1-201ENST00000395761 TMEM30CPA0ZSE6 113 aa13.47□□□□□ -0.25
CXCL1-201ENST00000395761 DNAJC9-AS1A6NH13 148 aa13.47□□□□□ -0.25
CXCL1-201ENST00000395761 A6NJ64 397 aa13.47□□□□□ -0.25
CXCL1-201ENST00000395761 CLPXO76031 633 aa13.47□□□□□ -0.25
CXCL1-201ENST00000395761 MT-ND4P03905 459 aa13.47□□□□□ -0.25
CXCL1-201ENST00000395761 CHATP28329 748 aa13.47□□□□□ -0.25
CXCL1-201ENST00000395761 RBM39Q14498 530 aaKnown RBP13.47□□□□□ -0.25
CXCL1-201ENST00000395761 UTF1Q5T230 341 aa13.47□□□□□ -0.25
CXCL1-201ENST00000395761 HEPN1Q6WQI6 88 aa13.47□□□□□ -0.25
CXCL1-201ENST00000395761 Q6YL49 198 aa13.47□□□□□ -0.25
CXCL1-201ENST00000395761 ZNF497Q6ZNH5 498 aa13.47□□□□□ -0.25
CXCL1-201ENST00000395761 SAMD12Q8N8I0 201 aa13.47□□□□□ -0.25
CXCL1-201ENST00000395761 ZNF565Q8N9K5 539 aa13.47□□□□□ -0.25
CXCL1-201ENST00000395761 OR13D1Q8NGV5 346 aa13.47□□□□□ -0.25
CXCL1-201ENST00000395761 JMJD8Q96S16 334 aa13.47□□□□□ -0.25
CXCL1-201ENST00000395761 SULT4A1Q9BR01 284 aa13.47□□□□□ -0.25
CXCL1-201ENST00000395761 ETAA1Q9NY74 926 aa13.47□□□□□ -0.25
CXCL1-201ENST00000395761 FAM96BQ9Y3D0 163 aa13.47□□□□□ -0.25
CXCL1-201ENST00000395761 KIAA2026Q5HYC2 2103 aa13.46□□□□□ -0.25
CXCL1-201ENST00000395761 FAM172BPA6NC97 362 aa13.46□□□□□ -0.25
CXCL1-201ENST00000395761 ZNF729A6NN14 1252 aaPredicted RBP13.46□□□□□ -0.25
CXCL1-201ENST00000395761 FOXI3A8MTJ6 420 aaPredicted RBP13.46□□□□□ -0.25
CXCL1-201ENST00000395761 RAB27BO00194 218 aa13.46□□□□□ -0.25
CXCL1-201ENST00000395761 SOCS1O15524 211 aa13.46□□□□□ -0.25
CXCL1-201ENST00000395761 HOXA3O43365 443 aaPredicted RBP13.46□□□□□ -0.25
CXCL1-201ENST00000395761 HPGDSO60760 199 aa13.46□□□□□ -0.25
CXCL1-201ENST00000395761 SCGNO76038 276 aa13.46□□□□□ -0.25
CXCL1-201ENST00000395761 GLAP06280 429 aa13.46□□□□□ -0.25
CXCL1-201ENST00000395761 MELTFP08582 738 aa13.46□□□□□ -0.25
CXCL1-201ENST00000395761 PAX6P26367 422 aa13.46□□□□□ -0.25
CXCL1-201ENST00000395761 SLC9A3R2Q15599 337 aa13.46□□□□□ -0.25
CXCL1-201ENST00000395761 LINC00299Q6ZSB3 139 aa13.46□□□□□ -0.25
CXCL1-201ENST00000395761 C6orf201Q7Z4U5 140 aa13.46□□□□□ -0.25
CXCL1-201ENST00000395761 OR56B1Q8NGI3 324 aa13.46□□□□□ -0.25
CXCL1-201ENST00000395761 RFESDQ8TAC1 157 aa13.46□□□□□ -0.25
CXCL1-201ENST00000395761 S100A16Q96FQ6 103 aaKnown RBP13.46□□□□□ -0.25
CXCL1-201ENST00000395761 NEDD4LQ96PU5 975 aa13.46□□□□□ -0.25
CXCL1-201ENST00000395761 FAAP24Q9BTP7 215 aa13.46□□□□□ -0.25
CXCL1-201ENST00000395761 C6orf62Q9GZU0 229 aaPredicted RBP13.46□□□□□ -0.25
CXCL1-201ENST00000395761 TMEM133Q9H2Q1 129 aa13.46□□□□□ -0.25
CXCL1-201ENST00000395761 MIXL1Q9H2W2 232 aa13.46□□□□□ -0.25
CXCL1-201ENST00000395761 CALYQ9NYX4 217 aa13.46□□□□□ -0.25
CXCL1-201ENST00000395761 IGHV2-26A0A0B4J1V2 119 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 RNF212BA8MTL3 300 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 ODF3BA8MYP8 253 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 TPPPO94811 219 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 ARG1P05089 322 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 ELK1P19419 428 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 BLVRBP30043 206 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms