RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 SYT3Q9BQG1 590 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 TAF9BQ9HBM6 251 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 GAB2Q9UQC2 676 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 ATP23Q9Y6H3 246 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 CACNA1GO43497 2377 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 OR5B21A6NL26 309 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 TRDCB7Z8K6 153 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 TOR1AO14656 332 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 HSD17B6O14756 317 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 TK1P04183 234 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 FOXF2Q12947 444 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 GABRA6Q16445 453 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 DEFB109BQ30KR1 87 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 TMEM268Q5VZI3 342 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 PCSK4Q6UW60 755 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 IGFL2Q6UWQ7 119 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 DPPA2Q7Z7J5 298 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 C9orf106Q8NAJ2 232 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 SLC25A40Q8TBP6 338 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 NARS2Q96I59 477 aaKnown RBP6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 CCL28Q9NRJ3 127 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 DLL3Q9NYJ7 618 aa6.77□□□□□ -1.33
PDLIM5-204ENST00000380176 DIDO1Q9BTC0 2240 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 DCHS1Q96JQ0 3298 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 A0A1B0GW55 424 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 A0A1W2PPH5 198 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 ZNF705EA8MWA4 302 aaPredicted RBP6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 H0YL77 283 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 DUX4L2P0CJ85 424 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 DUX4L3P0CJ86 424 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 DUX4L4P0CJ87 422 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 DUX4L5P0CJ88 424 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 DUX4L6P0CJ89 424 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 DUX4L7P0CJ90 424 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 KIR2DL2P43627 348 aaPredicted RBP6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 UBE2NP61088 152 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 SMCO1Q147U7 214 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 GUSBP1Q15486 140 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 SRSF7Q16629 238 aaKnown RBP eCLIP6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 FBXW12Q6X9E4 464 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 LGI3Q8N145 548 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 SCCPDHQ8NBX0 429 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 OR4A4PQ8NGN8 299 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 PIGMQ9H3S5 423 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 DUX4Q9UBX2 424 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 ZFHX2Q9C0A1 2572 aaPredicted RBP6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 NKX2-6A6NCS4 301 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 TNFSF12O43508 249 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 TUSC2O75896 110 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 MPV17P39210 176 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 PSG7Q13046 419 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 Q6P435 159 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 Q6ZT83 130 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 CCDC71LQ8N9Z2 235 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 TMEM222Q9H0R3 208 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 TMEM231Q9H6L2 316 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 WFDC1Q9HC57 220 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 LPAR3Q9UBY5 353 aa6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 SMG1Q96Q15 3661 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-204ENST00000380176 ATMQ13315 3056 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 J3QT63 122 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 J3QW42 95 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 ABCD4O14678 606 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 CDIPTO14735 213 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 CIDEAO60543 219 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 NDUFS6O75380 124 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 ZNF44P15621 663 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 ADCYAP1P18509 176 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 UCP2P55851 309 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 DEFA5Q01523 94 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 NHLH2Q02577 135 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 ZNF154Q13106 437 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 DMBX1Q8NFW5 382 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 OR4D5Q8NGN0 318 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 OR1J1Q8NGS3 322 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 UBALD1Q8TB05 177 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 TAAR6Q96RI8 345 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 PKIBQ9C010 78 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 HRH4Q9H3N8 390 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 PLK3Q9H4B4 646 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 CDH20Q9HBT6 801 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 CACNA1DQ01668 2161 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 CHD3Q12873 2000 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 KIR2DS1A0A191URI9 304 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 E5RGE8 158 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 SIRPB1O00241 398 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 TAAR5O14804 337 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 TSPAN4O14817 238 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 DEGS1O15121 323 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 KIR2DS4P43632 304 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 LPAR6P43657 344 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 ASCL1P50553 236 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 RPP30P78346 268 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 SRSF2Q01130 221 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 TGFBR3Q03167 851 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 KIR2DS1Q14954 304 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 SELENOHQ8IZQ5 122 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 CISD2Q8N5K1 135 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 PLPPR1Q8TBJ4 325 aa6.75□□□□□ -1.33
PDLIM5-204ENST00000380176 LRRC46Q96FV0 321 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms