RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 ELANEP08246 267 aa18.27■□□□□ 0.52
C9orf47-202ENST00000375850 PIGYQ3MUY2 71 aa18.27■□□□□ 0.52
C9orf47-202ENST00000375850 LPCAT4Q643R3 524 aa18.27■□□□□ 0.52
C9orf47-202ENST00000375850 C18orf65Q6ZTR6 163 aa18.27■□□□□ 0.52
C9orf47-202ENST00000375850 SUMF2Q8NBJ7 301 aa18.27■□□□□ 0.52
C9orf47-202ENST00000375850 JAM3Q9BX67 310 aa18.27■□□□□ 0.52
C9orf47-202ENST00000375850 RAB9BQ9NP90 201 aa18.27■□□□□ 0.52
C9orf47-202ENST00000375850 LINC00527Q9UJ94 153 aa18.27■□□□□ 0.52
C9orf47-202ENST00000375850 ST3GAL6Q9Y274 331 aa18.27■□□□□ 0.52
C9orf47-202ENST00000375850 GMPPBQ9Y5P6 360 aa18.27■□□□□ 0.52
C9orf47-202ENST00000375850 TXNL1O43396 289 aa18.26■□□□□ 0.51
C9orf47-202ENST00000375850 HTR3BO95264 441 aa18.26■□□□□ 0.51
C9orf47-202ENST00000375850 CSTBP04080 98 aaKnown RBP18.26■□□□□ 0.51
C9orf47-202ENST00000375850 CD1BP29016 333 aa18.26■□□□□ 0.51
C9orf47-202ENST00000375850 GPR12P47775 334 aa18.26■□□□□ 0.51
C9orf47-202ENST00000375850 CDX1P47902 265 aaPredicted RBP18.26■□□□□ 0.51
C9orf47-202ENST00000375850 FOXE3Q13461 319 aa18.26■□□□□ 0.51
C9orf47-202ENST00000375850 KIR2DS1Q14954 304 aa18.26■□□□□ 0.51
C9orf47-202ENST00000375850 Q8N6K4 173 aa18.26■□□□□ 0.51
C9orf47-202ENST00000375850 RNF152Q8N8N0 203 aa18.26■□□□□ 0.51
C9orf47-202ENST00000375850 OR5M8Q8NGP6 311 aa18.26■□□□□ 0.51
C9orf47-202ENST00000375850 GPR148Q8TDV2 347 aa18.26■□□□□ 0.51
C9orf47-202ENST00000375850 METTL9Q9H1A3 318 aa18.26■□□□□ 0.51
C9orf47-202ENST00000375850 ORC5O43913 435 aa18.25■□□□□ 0.51
C9orf47-202ENST00000375850 ZNF780AO75290 641 aaPredicted RBP18.25■□□□□ 0.51
C9orf47-202ENST00000375850 OR7C1O76099 320 aaPredicted RBP18.25■□□□□ 0.51
C9orf47-202ENST00000375850 GABRB1P18505 474 aa18.25■□□□□ 0.51
C9orf47-202ENST00000375850 GPR50Q13585 617 aa18.25■□□□□ 0.51
C9orf47-202ENST00000375850 MPV17LQ2QL34 196 aa18.25■□□□□ 0.51
C9orf47-202ENST00000375850 TMEM30BQ3MIR4 351 aa18.25■□□□□ 0.51
C9orf47-202ENST00000375850 ZIK1Q3SY52 487 aaPredicted RBP18.25■□□□□ 0.51
C9orf47-202ENST00000375850 CCDC58Q4VC31 144 aa18.25■□□□□ 0.51
C9orf47-202ENST00000375850 C9orf66Q5T8R8 295 aa18.25■□□□□ 0.51
C9orf47-202ENST00000375850 RAX2Q96IS3 184 aa18.25■□□□□ 0.51
C9orf47-202ENST00000375850 S100A13Q99584 98 aa18.25■□□□□ 0.51
C9orf47-202ENST00000375850 DCLRE1BQ9H816 532 aa18.25■□□□□ 0.51
C9orf47-202ENST00000375850 TMEM138Q9NPI0 162 aa18.25■□□□□ 0.51
C9orf47-202ENST00000375850 MRPS18AQ9NVS2 196 aaKnown RBP18.25■□□□□ 0.51
C9orf47-202ENST00000375850 ZNF580Q9UK33 172 aa18.25■□□□□ 0.51
C9orf47-202ENST00000375850 E9PI62 339 aa18.24■□□□□ 0.51
C9orf47-202ENST00000375850 SDCBPO00560 298 aaPredicted RBP18.24■□□□□ 0.51
C9orf47-202ENST00000375850 VSIG8P0DPA2 414 aa18.24■□□□□ 0.51
C9orf47-202ENST00000375850 RBM11P57052 281 aaKnown RBP18.24■□□□□ 0.51
C9orf47-202ENST00000375850 PPP3R1P63098 170 aa18.24■□□□□ 0.51
C9orf47-202ENST00000375850 ZFP1Q6P2D0 407 aa18.24■□□□□ 0.51
C9orf47-202ENST00000375850 OR51A2Q8NGJ7 313 aa18.24■□□□□ 0.51
C9orf47-202ENST00000375850 OR10K1Q8NGX5 313 aa18.24■□□□□ 0.51
C9orf47-202ENST00000375850 OR52N1Q8NH53 320 aa18.24■□□□□ 0.51
C9orf47-202ENST00000375850 RHOXF1Q8NHV9 184 aa18.24■□□□□ 0.51
C9orf47-202ENST00000375850 PYDC1Q8WXC3 89 aa18.24■□□□□ 0.51
C9orf47-202ENST00000375850 ARL11Q969Q4 196 aa18.24■□□□□ 0.51
C9orf47-202ENST00000375850 RPL36Q9Y3U8 105 aaKnown RBP18.24■□□□□ 0.51
C9orf47-202ENST00000375850 C15orf65H3BRN8 121 aa18.23■□□□□ 0.51
C9orf47-202ENST00000375850 MOSP00540 346 aa18.23■□□□□ 0.51
C9orf47-202ENST00000375850 RAB25P57735 213 aa18.23■□□□□ 0.51
C9orf47-202ENST00000375850 RPL22L1Q6P5R6 122 aaKnown RBP18.23■□□□□ 0.51
C9orf47-202ENST00000375850 Q8N9W7 124 aa18.23■□□□□ 0.51
C9orf47-202ENST00000375850 RTN4IP1Q8WWV3 396 aaPredicted RBP18.23■□□□□ 0.51
C9orf47-202ENST00000375850 TFAP2CQ92754 450 aa18.23■□□□□ 0.51
C9orf47-202ENST00000375850 RASL11BQ9BPW5 248 aa18.23■□□□□ 0.51
C9orf47-202ENST00000375850 CHCHD6Q9BRQ6 235 aa18.23■□□□□ 0.51
C9orf47-202ENST00000375850 SPACA1Q9HBV2 294 aa18.23■□□□□ 0.51
C9orf47-202ENST00000375850 GFOD1Q9NXC2 390 aa18.23■□□□□ 0.51
C9orf47-202ENST00000375850 TAS2R4Q9NYW5 299 aa18.23■□□□□ 0.51
C9orf47-202ENST00000375850 A0A1W2PPE3 182 aa18.22■□□□□ 0.51
C9orf47-202ENST00000375850 DYNC1I1O14576 645 aa18.22■□□□□ 0.51
C9orf47-202ENST00000375850 RPLP1P05386 114 aaKnown RBP18.22■□□□□ 0.51
C9orf47-202ENST00000375850 OR5H8P0DN80 308 aa18.22■□□□□ 0.51
C9orf47-202ENST00000375850 ZNF93P35789 620 aaPredicted RBP18.22■□□□□ 0.51
C9orf47-202ENST00000375850 SOX2P48431 317 aa18.22■□□□□ 0.51
C9orf47-202ENST00000375850 STX19Q8N4C7 294 aa18.22■□□□□ 0.51
C9orf47-202ENST00000375850 TMEM104Q8NE00 496 aa18.22■□□□□ 0.51
C9orf47-202ENST00000375850 ST6GALNAC6Q969X2 333 aa18.22■□□□□ 0.51
C9orf47-202ENST00000375850 TMEM106AQ96A25 262 aa18.22■□□□□ 0.51
C9orf47-202ENST00000375850 CHCHD3Q9NX63 227 aaKnown RBP18.22■□□□□ 0.51
C9orf47-202ENST00000375850 ING4Q9UNL4 249 aa18.22■□□□□ 0.51
C9orf47-202ENST00000375850 U3KQK5 164 aa18.22■□□□□ 0.51
C9orf47-202ENST00000375850 TRAV39A0A0B4J263 110 aa18.21■□□□□ 0.51
C9orf47-202ENST00000375850 CDRT1O95170 752 aa18.21■□□□□ 0.51
C9orf47-202ENST00000375850 VDAC1P21796 283 aa18.21■□□□□ 0.51
C9orf47-202ENST00000375850 REG1BP48304 166 aa18.21■□□□□ 0.51
C9orf47-202ENST00000375850 ZNF137PP52743 207 aa18.21■□□□□ 0.51
C9orf47-202ENST00000375850 GPR176Q14439 515 aa18.21■□□□□ 0.51
C9orf47-202ENST00000375850 C10orf67Q8IYJ2 551 aa18.21■□□□□ 0.51
C9orf47-202ENST00000375850 CBR4Q8N4T8 237 aa18.21■□□□□ 0.51
C9orf47-202ENST00000375850 OR52I1Q8NGK6 324 aa18.21■□□□□ 0.51
C9orf47-202ENST00000375850 S1PR3Q99500 378 aa18.21■□□□□ 0.51
C9orf47-202ENST00000375850 LSM4Q9Y4Z0 139 aaKnown RBP18.21■□□□□ 0.51
C9orf47-202ENST00000375850 DNAH9Q9NYC9 4486 aa18.21■□□□□ 0.51
C9orf47-202ENST00000375850 IGHV3-72A0A0B4J1Y9 119 aa18.2■□□□□ 0.5
C9orf47-202ENST00000375850 LINC01548A6NM66 108 aa18.2■□□□□ 0.5
C9orf47-202ENST00000375850 GEMIN2O14893 280 aaKnown RBP18.2■□□□□ 0.5
C9orf47-202ENST00000375850 IGHG4P01861 327 aa18.2■□□□□ 0.5
C9orf47-202ENST00000375850 GTF2F2P13984 249 aa18.2■□□□□ 0.5
C9orf47-202ENST00000375850 DDI2Q5TDH0 399 aa18.2■□□□□ 0.5
C9orf47-202ENST00000375850 STEAP3Q658P3 488 aa18.2■□□□□ 0.5
C9orf47-202ENST00000375850 ZNF497Q6ZNH5 498 aa18.2■□□□□ 0.5
C9orf47-202ENST00000375850 LCNL1Q6ZST4 164 aa18.2■□□□□ 0.5
C9orf47-202ENST00000375850 NEK7Q8TDX7 302 aa18.2■□□□□ 0.5
C9orf47-202ENST00000375850 C4orf3Q8WVX3 66 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms