RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 GABRA6Q16445 453 aa15.74■□□□□ 0.11
COL18A1-202ENST00000355480 NAT8Q9UHE5 227 aa15.74■□□□□ 0.11
COL18A1-202ENST00000355480 PPP1CCP36873 323 aaKnown RBP15.73■□□□□ 0.11
COL18A1-202ENST00000355480 TEX30Q5JUR7 227 aa15.73■□□□□ 0.11
COL18A1-202ENST00000355480 TMEM251Q8N6I4 163 aa15.73■□□□□ 0.11
COL18A1-202ENST00000355480 ZBTB34Q8NCN2 500 aa15.73■□□□□ 0.11
COL18A1-202ENST00000355480 DNAJC13O75165 2243 aa15.73■□□□□ 0.11
COL18A1-202ENST00000355480 CLDN14O95500 239 aa15.73■□□□□ 0.11
COL18A1-202ENST00000355480 MGPP08493 103 aa15.73■□□□□ 0.11
COL18A1-202ENST00000355480 VSIG8P0DPA2 414 aa15.73■□□□□ 0.11
COL18A1-202ENST00000355480 FAM214BQ7L5A3 538 aa15.73■□□□□ 0.11
COL18A1-202ENST00000355480 OR10D4PQ8NGN7 298 aa15.73■□□□□ 0.11
COL18A1-202ENST00000355480 ADAT3Q96EY9 351 aaPredicted RBP15.73■□□□□ 0.11
COL18A1-202ENST00000355480 P2RX4Q99571 388 aa15.73■□□□□ 0.11
COL18A1-202ENST00000355480 CFHR5Q9BXR6 569 aa15.73■□□□□ 0.11
COL18A1-202ENST00000355480 IGSF23A1L1A6 192 aa15.73■□□□□ 0.11
COL18A1-202ENST00000355480 RGS13O14921 159 aa15.73■□□□□ 0.11
COL18A1-202ENST00000355480 HOXD4P09016 255 aaPredicted RBP15.73■□□□□ 0.11
COL18A1-202ENST00000355480 NFAM1Q8NET5 270 aaPredicted RBP15.73■□□□□ 0.11
COL18A1-202ENST00000355480 NEU3Q9UQ49 428 aa15.73■□□□□ 0.11
COL18A1-202ENST00000355480 OR10C1Q96KK4 312 aa15.73■□□□□ 0.11
COL18A1-202ENST00000355480 MS4A10Q96PG2 267 aa15.73■□□□□ 0.11
COL18A1-202ENST00000355480 COL18A1P39060 1754 aa15.73■□□□□ 0.11
COL18A1-202ENST00000355480 ADAM11O75078 769 aa15.73■□□□□ 0.11
COL18A1-202ENST00000355480 INPP5JQ15735 1006 aaPredicted RBP15.73■□□□□ 0.11
COL18A1-202ENST00000355480 BSXQ3C1V8 233 aa15.73■□□□□ 0.11
COL18A1-202ENST00000355480 COL13A1Q5TAT6 717 aaPredicted RBP15.73■□□□□ 0.11
COL18A1-202ENST00000355480 HMSDA8MTL9 139 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 PSG2P11465 335 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 NPY1RP25929 384 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 MMP16P51512 607 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 ERVFRD-1P60508 538 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 MESP2Q0VG99 397 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 CDRT15L2A8MXV6 281 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 ACAA2P42765 397 aaKnown RBP15.72■□□□□ 0.11
COL18A1-202ENST00000355480 VWA1Q6PCB0 445 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 CCL13Q99616 98 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 NKX2-6A6NCS4 301 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 IGKV1D-16P01601 117 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 RNF224P0DH78 156 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 ID1P41134 155 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 NSUN5P2Q63ZY6 315 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 Q9N2K0 584 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 TRPM6Q9BX84 2022 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 J3QR06 171 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 MFNGO00587 321 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 FAM157CP0CG43 387 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.72■□□□□ 0.11
COL18A1-202ENST00000355480 EIF4E3Q8N5X7 224 aaKnown RBP15.72■□□□□ 0.11
COL18A1-202ENST00000355480 ZNF596Q8TC21 504 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 PGLYRP3Q96LB9 341 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 DIRC2Q96SL1 478 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 CRHP06850 196 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 HIST1H1EP10412 219 aaKnown RBP15.72■□□□□ 0.11
COL18A1-202ENST00000355480 UCP2P55851 309 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 PMS2P11Q13670 270 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 OR10G8Q8NGN5 311 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 ZNF714Q96N38 554 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 SF3B6Q9Y3B4 125 aaKnown RBP15.72■□□□□ 0.11
COL18A1-202ENST00000355480 OR51B2Q9Y5P1 312 aa15.72■□□□□ 0.11
COL18A1-202ENST00000355480 SMCHD1A6NHR9 2005 aa15.71■□□□□ 0.11
COL18A1-202ENST00000355480 LOXL3P58215 753 aa15.71■□□□□ 0.11
COL18A1-202ENST00000355480 LPAR5Q9H1C0 372 aa15.71■□□□□ 0.11
COL18A1-202ENST00000355480 CENPVL1A0A0U1RR11 272 aa15.71■□□□□ 0.11
COL18A1-202ENST00000355480 B2MP61769 119 aa15.71■□□□□ 0.11
COL18A1-202ENST00000355480 LYZL2Q7Z4W2 148 aa15.71■□□□□ 0.11
COL18A1-202ENST00000355480 P2RY6Q15077 328 aa15.71■□□□□ 0.11
COL18A1-202ENST00000355480 C1orf174Q8IYL3 243 aa15.71■□□□□ 0.11
COL18A1-202ENST00000355480 OR1K1Q8NGR3 316 aa15.71■□□□□ 0.11
COL18A1-202ENST00000355480 HILPDAQ9Y5L2 63 aa15.71■□□□□ 0.11
COL18A1-202ENST00000355480 SULT1A1P50225 295 aa15.71■□□□□ 0.1
COL18A1-202ENST00000355480 TCTEX1D1Q8N7M0 179 aa15.71■□□□□ 0.1
COL18A1-202ENST00000355480 DDA1Q9BW61 102 aa15.71■□□□□ 0.1
COL18A1-202ENST00000355480 K7N7A8 449 aa15.7■□□□□ 0.1
COL18A1-202ENST00000355480 RIGQ13278 110 aa15.7■□□□□ 0.1
COL18A1-202ENST00000355480 SLC25A42Q86VD7 318 aa15.7■□□□□ 0.1
COL18A1-202ENST00000355480 STARD4Q96DR4 205 aa15.7■□□□□ 0.1
COL18A1-202ENST00000355480 TPRP12270 2363 aaKnown RBP15.7■□□□□ 0.1
COL18A1-202ENST00000355480 TRBV5-3A0A0A0MS03 114 aa15.7■□□□□ 0.1
COL18A1-202ENST00000355480 PRSS23O95084 383 aa15.7■□□□□ 0.1
COL18A1-202ENST00000355480 PSG4Q00888 419 aa15.7■□□□□ 0.1
COL18A1-202ENST00000355480 FAM27BQ5VT28 67 aa15.7■□□□□ 0.1
COL18A1-202ENST00000355480 TPRX1Q8N7U7 411 aa15.7■□□□□ 0.1
COL18A1-202ENST00000355480 RBM11P57052 281 aaKnown RBP15.7■□□□□ 0.1
COL18A1-202ENST00000355480 HDHD3Q9BSH5 251 aaPredicted RBP15.7■□□□□ 0.1
COL18A1-202ENST00000355480 M0R2Z0 102 aa15.7■□□□□ 0.1
COL18A1-202ENST00000355480 RAB29O14966 203 aa15.7■□□□□ 0.1
COL18A1-202ENST00000355480 IL11P20809 199 aa15.7■□□□□ 0.1
COL18A1-202ENST00000355480 TEPPQ6URK8 271 aa15.7■□□□□ 0.1
COL18A1-202ENST00000355480 ZPLD1Q8TCW7 415 aa15.7■□□□□ 0.1
COL18A1-202ENST00000355480 AUP1Q9Y679 476 aa15.7■□□□□ 0.1
COL18A1-202ENST00000355480 TRAV34A0A0B4J273 112 aa15.7■□□□□ 0.1
COL18A1-202ENST00000355480 A0A1B0GU03 582 aa15.7■□□□□ 0.1
COL18A1-202ENST00000355480 EWSR1Q01844 656 aaKnown RBP eCLIP15.7■□□□□ 0.11e-6■■■■■ 30.4
COL18A1-202ENST00000355480 OR2V2Q96R30 315 aa15.7■□□□□ 0.1
COL18A1-202ENST00000355480 ZNF552Q9H707 407 aaPredicted RBP15.7■□□□□ 0.1
COL18A1-202ENST00000355480 AHRRA9YTQ3 701 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 RHBDL1O75783 438 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 WNT5AP41221 380 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 KHDC3LQ587J8 217 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms