RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 OR8G1Q15617 311 aa9.15□□□□□ -0.94
RTN3-204ENST00000354497 HMGN3Q15651 99 aa9.15□□□□□ -0.94
RTN3-204ENST00000354497 TPRA1Q86W33 373 aa9.15□□□□□ -0.94
RTN3-204ENST00000354497 CALHM3Q86XJ0 350 aa9.15□□□□□ -0.94
RTN3-204ENST00000354497 OR6V1Q8N148 313 aa9.15□□□□□ -0.94
RTN3-204ENST00000354497 PRSS35Q8N3Z0 413 aa9.15□□□□□ -0.94
RTN3-204ENST00000354497 FGFRL1Q8N441 504 aa9.15□□□□□ -0.94
RTN3-204ENST00000354497 ZNF383Q8NA42 475 aa9.15□□□□□ -0.94
RTN3-204ENST00000354497 BEST4Q8NFU0 473 aa9.15□□□□□ -0.94
RTN3-204ENST00000354497 NPRL2Q8WTW4 380 aa9.15□□□□□ -0.94
RTN3-204ENST00000354497 APOBEC3DQ96AK3 386 aaPredicted RBP9.15□□□□□ -0.94
RTN3-204ENST00000354497 TRIM36Q9NQ86 728 aa9.15□□□□□ -0.94
RTN3-204ENST00000354497 C1orf123Q9NWV4 160 aa9.15□□□□□ -0.94
RTN3-204ENST00000354497 PIPOXQ9P0Z9 390 aa9.15□□□□□ -0.94
RTN3-204ENST00000354497 RPUSD1Q9UJJ7 312 aaKnown RBP9.15□□□□□ -0.94
RTN3-204ENST00000354497 GSTK1Q9Y2Q3 226 aa9.15□□□□□ -0.94
RTN3-204ENST00000354497 MED31Q9Y3C7 131 aa9.15□□□□□ -0.94
RTN3-204ENST00000354497 ELOA3CA0A087WX78 387 aaPredicted RBP9.14□□□□□ -0.95
RTN3-204ENST00000354497 A0A0D9SG52 128 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 J3QW42 95 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 CXCR6O00574 342 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 CPEP16870 476 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 GPX2P18283 190 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 SAA4P35542 130 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 KIR2DS4P43632 304 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 ZP1P60852 638 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 GMFBP60983 142 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 SPHARQ15513 63 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 PYY3Q5JQD4 70 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 TMEM244Q5VVB8 128 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 PGBD2Q6P3X8 592 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 HS3ST5Q8IZT8 346 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 OR10A7Q8NGE5 316 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 OR51A7Q8NH64 312 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 GNPDA2Q8TDQ7 276 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 PCNPQ8WW12 178 aaKnown RBP9.14□□□□□ -0.95
RTN3-204ENST00000354497 SPRYD4Q8WW59 207 aaPredicted RBP9.14□□□□□ -0.95
RTN3-204ENST00000354497 TXNL4BQ9NX01 149 aaKnown RBP9.14□□□□□ -0.95
RTN3-204ENST00000354497 HIF3AQ9Y2N7 669 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 TRAV27A0A087WT01 109 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 WI2-2373I1.2A0A1W2PRP0 233 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 A0A1W2PRX2 142 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 OR6C6A6NF89 314 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 A6NLC8 198 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 RER1O15258 196 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 TXNL1O43396 289 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 CDRT1O95170 752 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 TNFRSF1BP20333 461 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 CA6P23280 308 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 S100A2P29034 98 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 PRKXP51817 358 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 TPBGQ13641 420 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 KCNMB1Q16558 191 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 MAJINQ3KP22 176 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 IL34Q6ZMJ4 242 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 ZDHHC21Q8IVQ6 265 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 OR9Q2Q8NGE9 314 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 OR10K1Q8NGX5 313 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 C2CD4CQ8TF44 421 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 GINS4Q9BRT9 223 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 ADAT1Q9BUB4 502 aaKnown RBP9.14□□□□□ -0.95
RTN3-204ENST00000354497 ABCG5Q9H222 651 aa9.14□□□□□ -0.95
RTN3-204ENST00000354497 TRBV5-3A0A0A0MS03 114 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 TRDV1A0A1B0GX56 115 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 IRGMA1A4Y4 181 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 ARRDC5A6NEK1 342 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 SEC14L6B5MCN3 397 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 GPR31O00270 319 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 XKRYO14609 159 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 CTDSPLO15194 276 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 FGF16O43320 207 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 GSTZ1O43708 216 aaPredicted RBP9.13□□□□□ -0.95
RTN3-204ENST00000354497 FCN3O75636 299 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 LY86O95711 162 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 GRPP07492 148 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 PRKACGP22612 351 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 RPL4P36578 427 aaKnown RBP9.13□□□□□ -0.95
RTN3-204ENST00000354497 MTPNP58546 118 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 SNRPGP62308 76 aaKnown RBP9.13□□□□□ -0.95
RTN3-204ENST00000354497 MALLQ13021 153 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 PIN1Q13526 163 aaPredicted RBP9.13□□□□□ -0.95
RTN3-204ENST00000354497 ZNF345Q14585 488 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 HIST2H3PS2Q5TEC6 136 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 ZNF57Q68EA5 555 aaPredicted RBP9.13□□□□□ -0.95
RTN3-204ENST00000354497 DUX4L9Q6RFH8 374 aaPredicted RBP9.13□□□□□ -0.95
RTN3-204ENST00000354497 ZNF826PQ6ZT77 177 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 NDUFA11Q86Y39 141 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 FAM90A1Q86YD7 464 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 CBLN2Q8IUK8 224 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 HSD17B11Q8NBQ5 300 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 OR51G2Q8NGK0 314 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 MRGPRDQ8TDS7 321 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 LIPHQ8WWY8 451 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 H1FXQ92522 213 aaKnown RBP9.13□□□□□ -0.95
RTN3-204ENST00000354497 HIST1H2BAQ96A08 127 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 BSCL2Q96G97 398 aaPredicted RBP9.13□□□□□ -0.95
RTN3-204ENST00000354497 S100A13Q99584 98 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 CCL13Q99616 98 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 CITED2Q99967 270 aaPredicted RBP9.13□□□□□ -0.95
RTN3-204ENST00000354497 NPFFR1Q9GZQ6 430 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms