RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 RPL12P30050 165 aaKnown RBP10.55□□□□□ -0.72
SMAD9-201ENST00000350148 CDC34P49427 236 aaPredicted RBP10.55□□□□□ -0.72
SMAD9-201ENST00000350148 RSPO4Q2I0M5 234 aaPredicted RBP10.55□□□□□ -0.72
SMAD9-201ENST00000350148 CLDN16Q9Y5I7 305 aa10.55□□□□□ -0.72
SMAD9-201ENST00000350148 TRBV23-1A0A0A0MS06 115 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 DUXBA0A1W2PPF3 345 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 BCL2L11O43521 198 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 PTGDSP41222 190 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 CLDN18P56856 261 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 DEFB108BQ8NET1 73 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 OR10X1Q8NGY0 326 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 SMIM12Q96EX1 92 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 PLXNB3Q9ULL4 1909 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 ZNF260Q3ZCT1 412 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 OR11H4Q8NGC9 324 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 LPAR5Q9H1C0 372 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 RASL12Q9NYN1 266 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 NPTNQ9Y639 398 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 SPP1P10451 314 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 ATP1A1-AS1Q5TC04 95 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 CXorf67Q86X51 503 aaPredicted RBP10.54□□□□□ -0.72
SMAD9-201ENST00000350148 MUC20Q8N307 709 aaPredicted RBP10.54□□□□□ -0.72
SMAD9-201ENST00000350148 TAF9BQ9HBM6 251 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 FAM90A27PA6NNH2 459 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 M0R2Z0 102 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 GEMIN2O14893 280 aaKnown RBP10.54□□□□□ -0.72
SMAD9-201ENST00000350148 SULT1A3P0DMM9 295 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 SULT1A4P0DMN0 295 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 HLA-DRB3P79483 266 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 KLRB1Q12918 225 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 PPP1R1AQ13522 171 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 SHEQ5VZ18 495 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 Q6ZN92 141 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 PPP1R1CQ8WVI7 109 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 AQP3Q92482 292 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 WDYHV1Q96HA8 205 aa10.54□□□□□ -0.72
SMAD9-201ENST00000350148 BRWD1Q9NSI6 2320 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 CDX4O14627 284 aaPredicted RBP10.53□□□□□ -0.72
SMAD9-201ENST00000350148 RAB29O14966 203 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 SYNGR3O43761 229 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 NEURL1O76050 574 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 METTL15P1P0C7V9 234 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 OMGP23515 440 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 C11orf42Q8N5U0 333 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 SLC25A38Q96DW6 304 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 C2orf16Q68DN1 1984 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 LINC00862A6NCI5 91 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 LRRC3CA6NJW4 275 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 GDF9O60383 454 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 SS18L1O75177 396 aaPredicted RBP10.53□□□□□ -0.72
SMAD9-201ENST00000350148 MST1P26927 711 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 FAM122AQ96E09 287 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 H3BMH7 237 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 ADH4P08319 380 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 TAS2R60P59551 318 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 LAMTOR1Q6IAA8 161 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 BRICD5Q6PL45 260 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 RAB1CQ92928 201 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 C3orf85A0A1B0GTC6 90 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 C17orf51A8MQB3 221 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 TMEM14DPA8MWL7 114 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 EFNB2P52799 333 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 RTN4RQ9BZR6 473 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 NMES1Q9C002 83 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 ZDHHC8Q9ULC8 765 aa10.53□□□□□ -0.72
SMAD9-201ENST00000350148 RRASP10301 218 aa10.52□□□□□ -0.72
SMAD9-201ENST00000350148 CD200P41217 278 aa10.52□□□□□ -0.72
SMAD9-201ENST00000350148 C19orf35Q6ZS72 473 aa10.52□□□□□ -0.72
SMAD9-201ENST00000350148 OR8G5Q8NG78 346 aa10.52□□□□□ -0.72
SMAD9-201ENST00000350148 ERGIC1Q969X5 290 aa10.52□□□□□ -0.72
SMAD9-201ENST00000350148 RHOVQ96L33 236 aa10.52□□□□□ -0.72
SMAD9-201ENST00000350148 MS4A10Q96PG2 267 aa10.52□□□□□ -0.72
SMAD9-201ENST00000350148 RAB40CQ96S21 281 aa10.52□□□□□ -0.72
SMAD9-201ENST00000350148 OR2J1Q9GZK6 312 aa10.52□□□□□ -0.72
SMAD9-201ENST00000350148 MASP2O00187 686 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 ADRA2AP08913 450 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 CCL1P22362 96 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 CEACAM6P40199 344 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 FAM3AP98173 230 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 HABP2Q14520 560 aaPredicted RBP10.52□□□□□ -0.73
SMAD9-201ENST00000350148 TMEM30BQ3MIR4 351 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 VWA1Q6PCB0 445 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 TMED6Q8WW62 240 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 C1QTNF5Q9BXJ0 243 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 ZNF665Q9H7R5 613 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 FBLN5Q9UBX5 448 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 G3V3Q6 166 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 AGFG2O95081 481 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 HRASP01112 189 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 RPA2P15927 270 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 TIMM23BQ5SRD1 257 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 NSUN5P2Q63ZY6 315 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 FAM57AQ8TBR7 257 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 PACRGQ96M98 296 aaPredicted RBP10.52□□□□□ -0.73
SMAD9-201ENST00000350148 ELF5Q9UKW6 265 aaPredicted RBP10.52□□□□□ -0.73
SMAD9-201ENST00000350148 A0A0G2JMM0 328 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 A0A1W2PPB8 328 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 A0A1W2PRS3 328 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 KIR3DP1A8MWS1 328 aa10.52□□□□□ -0.73
SMAD9-201ENST00000350148 RNF224P0DH78 156 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms