RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 NEDD4LQ96PU5 975 aa12.38□□□□□ -0.43
UBE3B-201ENST00000340074 SULT4A1Q9BR01 284 aa12.38□□□□□ -0.43
UBE3B-201ENST00000340074 URM1Q9BTM9 101 aaKnown RBP12.38□□□□□ -0.43
UBE3B-201ENST00000340074 LINC00574Q9H8X3 128 aa12.38□□□□□ -0.43
UBE3B-201ENST00000340074 A0A0B4J203 849 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 NPIPB11E5RHQ5 1161 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 LDLRAD4O15165 306 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 IL1AP01583 271 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 SMIM18P0DKX4 95 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 GZMHP20718 246 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 NFYBP25208 207 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 BLVRBP30043 206 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-201ENST00000340074 SDC2P34741 201 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 PLA2G7Q13093 441 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 LTC4SQ16873 150 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 LDLRAD2Q5SZI1 272 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 UTF1Q5T230 341 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 RTN4RL2Q86UN3 420 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 TPRA1Q86W33 373 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 ABHD12Q8N2K0 398 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 OR4K15Q8NH41 348 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 RFESDQ8TAC1 157 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 YIPF6Q96EC8 236 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 FAAP24Q9BTP7 215 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 CHIAQ9BZP6 476 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 LIN7BQ9HAP6 207 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 ZNF286AQ9HBT8 521 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 IDI2-AS1Q9NZ38 188 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 FBLN5Q9UBX5 448 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 TRAPPC2LQ9UL33 140 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 TBL2Q9Y4P3 447 aaKnown RBP12.37□□□□□ -0.43
UBE3B-201ENST00000340074 POMT1Q9Y6A1 747 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 A0A087X0M5 115 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 A0A1B0GX30 115 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 NOTOA8MTQ0 251 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 SOCS1O15524 211 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 SLC2A2P11168 524 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-201ENST00000340074 VEGFCP49767 419 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 MXD1Q05195 221 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 C16orf87Q6PH81 154 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 DYNAPQ8N1N2 210 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 GAPTQ8N292 157 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 FAM89BQ8N5H3 189 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 TMEM86BQ8N661 226 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 ARL11Q969Q4 196 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 MEGF9Q9H1U4 602 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 DPAGT1Q9H3H5 408 aa12.37□□□□□ -0.43
UBE3B-201ENST00000340074 C15orf65H3BRN8 121 aa12.36□□□□□ -0.43
UBE3B-201ENST00000340074 CA11O75493 328 aa12.36□□□□□ -0.43
UBE3B-201ENST00000340074 CD34P28906 385 aa12.36□□□□□ -0.43
UBE3B-201ENST00000340074 ACTG1P63261 375 aa12.36□□□□□ -0.43
UBE3B-201ENST00000340074 TIMM50Q3ZCQ8 353 aa12.36□□□□□ -0.43
UBE3B-201ENST00000340074 UBALD1Q8TB05 177 aa12.36□□□□□ -0.43
UBE3B-201ENST00000340074 MRPL30Q8TCC3 161 aaKnown RBP12.36□□□□□ -0.43
UBE3B-201ENST00000340074 MALSU1Q96EH3 234 aa12.36□□□□□ -0.43
UBE3B-201ENST00000340074 SSX3Q99909 188 aa12.36□□□□□ -0.43
UBE3B-201ENST00000340074 PLEKHJ1Q9NW61 149 aa12.36□□□□□ -0.43
UBE3B-201ENST00000340074 RAB22AQ9UL26 194 aa12.36□□□□□ -0.43
UBE3B-201ENST00000340074 FOXI3A8MTJ6 420 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-201ENST00000340074 ORC5O43913 435 aa12.35□□□□□ -0.43
UBE3B-201ENST00000340074 AIREO43918 545 aa12.35□□□□□ -0.43
UBE3B-201ENST00000340074 IGLV1-47P01700 117 aa12.35□□□□□ -0.43
UBE3B-201ENST00000340074 IGHV3-7P01780 117 aa12.35□□□□□ -0.43
UBE3B-201ENST00000340074 CLEC2LP0C7M8 214 aa12.35□□□□□ -0.43
UBE3B-201ENST00000340074 RCC1P18754 421 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-201ENST00000340074 EFNB2P52799 333 aa12.35□□□□□ -0.43
UBE3B-201ENST00000340074 TMEM50BP56557 158 aa12.35□□□□□ -0.43
UBE3B-201ENST00000340074 SSX2Q16385 188 aa12.35□□□□□ -0.43
UBE3B-201ENST00000340074 SFXN4Q6P4A7 337 aa12.35□□□□□ -0.43
UBE3B-201ENST00000340074 GDPGP1Q6ZNW5 385 aa12.35□□□□□ -0.43
UBE3B-201ENST00000340074 OR10A7Q8NGE5 316 aa12.35□□□□□ -0.43
UBE3B-201ENST00000340074 OR4P4Q8NGL7 312 aa12.35□□□□□ -0.43
UBE3B-201ENST00000340074 NDNFQ8TB73 568 aa12.35□□□□□ -0.43
UBE3B-201ENST00000340074 ZNF596Q8TC21 504 aa12.35□□□□□ -0.43
UBE3B-201ENST00000340074 LEAP2Q969E1 77 aa12.35□□□□□ -0.43
UBE3B-201ENST00000340074 DAPK2Q9UIK4 370 aa12.35□□□□□ -0.43
UBE3B-201ENST00000340074 FAM181BA6NEQ2 426 aa12.34□□□□□ -0.43
UBE3B-201ENST00000340074 C12orf77C9JDV5 145 aa12.34□□□□□ -0.43
UBE3B-201ENST00000340074 H3BUX3 64 aa12.34□□□□□ -0.43
UBE3B-201ENST00000340074 TOR1AO14656 332 aa12.34□□□□□ -0.43
UBE3B-201ENST00000340074 RAB6AP20340 208 aa12.34□□□□□ -0.43
UBE3B-201ENST00000340074 HTR1DP28221 377 aa12.34□□□□□ -0.43
UBE3B-201ENST00000340074 TGFBR1P36897 503 aa12.34□□□□□ -0.43
UBE3B-201ENST00000340074 PRRX1P54821 245 aa12.34□□□□□ -0.43
UBE3B-201ENST00000340074 LRRC75BQ2VPJ9 315 aa12.34□□□□□ -0.43
UBE3B-201ENST00000340074 PLA1AQ53H76 456 aa12.34□□□□□ -0.43
UBE3B-201ENST00000340074 C6orf183Q5T699 404 aa12.34□□□□□ -0.43
UBE3B-201ENST00000340074 MINOS1Q5TGZ0 78 aa12.34□□□□□ -0.43
UBE3B-201ENST00000340074 PRR18Q8N4B5 295 aa12.34□□□□□ -0.43
UBE3B-201ENST00000340074 OR56B1Q8NGI3 324 aa12.34□□□□□ -0.43
UBE3B-201ENST00000340074 TAF15Q92804 592 aaKnown RBP eCLIP12.34□□□□□ -0.43
UBE3B-201ENST00000340074 GCDHQ92947 438 aaPredicted RBP12.34□□□□□ -0.43
UBE3B-201ENST00000340074 ARHGAP5-AS1Q96IT6 56 aa12.34□□□□□ -0.43
UBE3B-201ENST00000340074 MBNL3Q9NUK0 354 aaKnown RBP12.34□□□□□ -0.43
UBE3B-201ENST00000340074 VPREB3Q9UKI3 123 aa12.34□□□□□ -0.43
UBE3B-201ENST00000340074 HILPDAQ9Y5L2 63 aa12.34□□□□□ -0.43
UBE3B-201ENST00000340074 MINOS1-NBL1R4GNA1 71 aa12.34□□□□□ -0.43
UBE3B-201ENST00000340074 STAB1Q9NY15 2570 aa12.33□□□□□ -0.44
UBE3B-201ENST00000340074 BTBD17A6NE02 478 aa12.33□□□□□ -0.44
UBE3B-201ENST00000340074 SDCBPO00560 298 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms