RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 LEAP2Q969E1 77 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 RAB3CQ96E17 227 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 POM121Q96HA1 1249 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 ZNF48Q96MX3 618 aaPredicted RBP7.42□□□□□ -1.22
PDE4D-201ENST00000309641 SLC6A7Q99884 636 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 CALYQ9NYX4 217 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 OR6C3Q9NZP0 311 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 LPAR3Q9UBY5 353 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 SPATA2Q9UM82 520 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 IGHV1-69DA0A0B4J2H0 117 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 KBTBD11-OT1A0A1B0GTJ5 212 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 C15orf65H3BRN8 121 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 MFNGO00587 321 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 CLPXO76031 633 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 NAPSAO96009 420 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 IGHV1-69P01742 117 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 GLAP06280 429 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 PTHLHP12272 177 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 HIST1H1DP16402 221 aaKnown RBP7.41□□□□□ -1.22
PDE4D-201ENST00000309641 GPR157Q5UAW9 335 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 IZUMO1Q8IYV9 350 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 PRR18Q8N4B5 295 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 ZNF565Q8N9K5 539 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 PTX4Q96A99 478 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 AJUBAQ96IF1 538 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 KIRREL1Q96J84 757 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 TAS2R3Q9NYW6 316 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 COMMD3Q9UBI1 195 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 TRAPPC2LQ9UL33 140 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 HSF4Q9ULV5 492 aa7.41□□□□□ -1.22
PDE4D-201ENST00000309641 A0A0U1RQK1 487 aa7.4□□□□□ -1.22
PDE4D-201ENST00000309641 A0A1W2PPH5 198 aa7.4□□□□□ -1.22
PDE4D-201ENST00000309641 C12orf77C9JDV5 145 aa7.4□□□□□ -1.22
PDE4D-201ENST00000309641 NPIPB11E5RHQ5 1161 aa7.4□□□□□ -1.22
PDE4D-201ENST00000309641 MADCAM1Q13477 382 aa7.4□□□□□ -1.22
PDE4D-201ENST00000309641 HEPN1Q6WQI6 88 aa7.4□□□□□ -1.22
PDE4D-201ENST00000309641 LHFPL4Q7Z7J7 247 aa7.4□□□□□ -1.22
PDE4D-201ENST00000309641 SAMD12Q8N8I0 201 aa7.4□□□□□ -1.22
PDE4D-201ENST00000309641 OR1L1Q8NH94 360 aa7.4□□□□□ -1.22
PDE4D-201ENST00000309641 ARL11Q969Q4 196 aa7.4□□□□□ -1.22
PDE4D-201ENST00000309641 SUCNR1Q9BXA5 334 aa7.4□□□□□ -1.22
PDE4D-201ENST00000309641 MS4A7Q9GZW8 240 aaPredicted RBP7.4□□□□□ -1.22
PDE4D-201ENST00000309641 NCOR1P1Q9H4R4 102 aa7.4□□□□□ -1.22
PDE4D-201ENST00000309641 OCEL1Q9H607 264 aa7.4□□□□□ -1.22
PDE4D-201ENST00000309641 MBNL3Q9NUK0 354 aaKnown RBP7.4□□□□□ -1.22
PDE4D-201ENST00000309641 ABRACLQ9P1F3 81 aa7.4□□□□□ -1.22
PDE4D-201ENST00000309641 ETV7Q9Y603 341 aa7.4□□□□□ -1.22
PDE4D-201ENST00000309641 IGHV2-26A0A0B4J1V2 119 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 IGHV3-43A0A0B4J1X8 118 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 METTL21EPA6NDL7 271 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 TMEM235A6NFC5 223 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 CCDC160A6NGH7 325 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 ZNF729A6NN14 1252 aaPredicted RBP7.4□□□□□ -1.23
PDE4D-201ENST00000309641 EIF4EP06730 217 aaKnown RBP7.4□□□□□ -1.23
PDE4D-201ENST00000309641 IGHV3-43DP0DP04 118 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 NFYBP25208 207 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 SAA4P35542 130 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 RORCP51449 518 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 UBE2E1P51965 193 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 TUSC1Q2TAM9 212 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 DEFB112Q30KQ8 113 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 CDNFQ49AH0 187 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 CROCCP3Q8IVE0 287 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 DYNC2LI1Q8TCX1 351 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 MAFIPQ8WZ33 124 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 GAL3ST2Q9H3Q3 398 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 LINC00574Q9H8X3 128 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 TAF9BQ9HBM6 251 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 ZNF286AQ9HBT8 521 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 ZNF230Q9UIE0 474 aaPredicted RBP7.4□□□□□ -1.23
PDE4D-201ENST00000309641 SESN1Q9Y6P5 492 aa7.4□□□□□ -1.23
PDE4D-201ENST00000309641 TRAV18A0A075B6X5 111 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 hCG_1809904A0A1W2PP81 198 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 A0A1W2PPE2 198 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 A0A1W2PPE3 182 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 A0A1W2PR64 198 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 A0A1W2PRV1 198 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 MEIOCA2RUB1 952 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 DPPA5A6NC42 116 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 NPFFO15130 113 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 HPGDSO60760 199 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 CA11O75493 328 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 HBZP02008 142 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 RBP4P02753 201 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 GZMHP20718 246 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 SCAND1P57086 179 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 LOXL3P58215 753 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 FOXB2Q5VYV0 432 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 NCR3LG1Q68D85 454 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 ZNF880Q6PDB4 577 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 DYNAPQ8N1N2 210 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 SIGLECL1Q8N7X8 197 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 SETD6Q8TBK2 473 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 GCDHQ92947 438 aaPredicted RBP7.39□□□□□ -1.23
PDE4D-201ENST00000309641 DUX5Q96PT3 197 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 CMSS1Q9BQ75 279 aaKnown RBP7.39□□□□□ -1.23
PDE4D-201ENST00000309641 TMEM133Q9H2Q1 129 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 HEXA-AS1Q9H8Q6 139 aa7.39□□□□□ -1.23
PDE4D-201ENST00000309641 CHMP1AQ9HD42 196 aaPredicted RBP7.39□□□□□ -1.23
PDE4D-201ENST00000309641 ESM1Q9NQ30 184 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms