RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 CHATP28329 748 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 RPL12P30050 165 aaKnown RBP12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 RAB11AP62491 216 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 RPL31P62899 125 aaKnown RBP12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 IL24Q13007 206 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 TBC1D26Q86UD7 250 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 SLC25A10Q9UBX3 287 aaPredicted RBP12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 OR2W1Q9Y3N9 320 aa12.37□□□□□ -0.43
PDLIM2-201ENST00000265810 MBD3L4A6NDZ8 208 aaPredicted RBP12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 MBD3L3A6NE82 208 aaPredicted RBP12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 MBD3L5A6NJ08 208 aaPredicted RBP12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 MGST3O14880 152 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 WNT5AP41221 380 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 SLC25A42Q86VD7 318 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 MBD3L2Q8NHZ7 208 aaPredicted RBP12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 MSI2Q96DH6 328 aaKnown RBP12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 AIFM2Q9BRQ8 373 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 PLSCR3Q9NRY6 295 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 VSIG4Q9Y279 399 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 IGHV1-18A0A0C4DH31 117 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 OR2F2O95006 317 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 AKR1C1Q04828 323 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 OR2F1Q13607 317 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 GGNBP1Q5YKI7 109 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 SPICQ8N5J4 248 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 OR8B3Q8NGG8 313 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 OR8B2Q96RD0 313 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 GFI1Q99684 422 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 RAB18Q9NP72 206 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 CHD9Q3L8U1 2897 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 RAB7AP51149 207 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 IGFBP7Q16270 282 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 PLAC9Q5JTB6 97 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 TSNAXQ99598 290 aaKnown RBP12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 CLN8Q9UBY8 286 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 TMED3Q9Y3Q3 217 aa12.36□□□□□ -0.43
PDLIM2-201ENST00000265810 A0A1W2PRD5 423 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 A0A1W2PRF3 423 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 A0A1W2PRM7 423 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 E5RGE8 158 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 PPP1CCP36873 323 aaKnown RBP12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 GNB1P62873 340 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 BLOC1S1P78537 153 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 ZNF266Q14584 549 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 ESCO2Q56NI9 601 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 VAX1Q5SQQ9 334 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 FAHD2BQ6P2I3 314 aaPredicted RBP12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 OR1S2Q8NGQ3 325 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 FAHD2AQ96GK7 314 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 COMMD5Q9GZQ3 224 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 ZNF355PQ9NSJ1 428 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 MTCH1Q9NZJ7 389 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 NSG2Q9Y328 171 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 SCGB2A1O75556 95 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 APOC3P02656 99 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 BAXQ07812 192 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 RPRMLQ8N4K4 120 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 RNF138Q8WVD3 245 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 IGF2RP11717 2491 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 MFNGO00587 321 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 MRPS11P82912 194 aaKnown RBP12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 AVPI1Q5T686 147 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 IGF2-ASQ6U949 168 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 IL19Q9UHD0 177 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 CACNA1AO00555 2505 aa12.35□□□□□ -0.43
PDLIM2-201ENST00000265810 A0A0G2JNJ9 132 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 GPR37O15354 613 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 NTF4P34130 210 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 MPPED2Q15777 294 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 WDFY1Q8IWB7 410 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 RNASE6Q93091 150 aaKnown RBP12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 MEGF10Q96KG7 1140 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 PBDC1Q9BVG4 233 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 Q9UFV3 132 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 A0A1W2PPV4 95 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 IFNA1P01562 189 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 OR8U8P0C7N1 319 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 SULT1A3P0DMM9 295 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 SULT1A4P0DMN0 295 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 APOBEC3AP31941 199 aaPredicted RBP12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 ASPHD2Q6ICH7 369 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 C11orf87Q6NUJ2 197 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 RPEQ96AT9 228 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 FAM212BQ9NTI7 297 aaPredicted RBP12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 IQCF6A8MYZ5 107 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 K7EM74 188 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 TMEM50BP56557 158 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 C9orf152Q5JTZ5 239 aa12.34□□□□□ -0.43
PDLIM2-201ENST00000265810 A0A1W2PPE3 182 aa12.33□□□□□ -0.43
PDLIM2-201ENST00000265810 ALX3O95076 343 aa12.33□□□□□ -0.43
PDLIM2-201ENST00000265810 CLDN14O95500 239 aa12.33□□□□□ -0.43
PDLIM2-201ENST00000265810 GPR6P46095 362 aaPredicted RBP12.33□□□□□ -0.43
PDLIM2-201ENST00000265810 RAB32Q13637 225 aa12.33□□□□□ -0.43
PDLIM2-201ENST00000265810 FAM201AQ5SY85 155 aa12.33□□□□□ -0.43
PDLIM2-201ENST00000265810 ERGIC1Q969X5 290 aa12.33□□□□□ -0.43
PDLIM2-201ENST00000265810 ST6GAL2Q96JF0 529 aa12.33□□□□□ -0.43
PDLIM2-201ENST00000265810 SHARPINQ9H0F6 387 aa12.33□□□□□ -0.43
PDLIM2-201ENST00000265810 FAM96BQ9Y3D0 163 aa12.33□□□□□ -0.43
PDLIM2-201ENST00000265810 DEFA4P12838 97 aa12.33□□□□□ -0.44
PDLIM2-201ENST00000265810 TESK1Q15569 626 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms