RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 OR9G1Q8NH87 305 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 MRGPRDQ8TDS7 321 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 TMEM59Q9BXS4 323 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 BANF2Q9H503 90 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 RAB9BQ9NP90 201 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 IDI2-AS1Q9NZ38 188 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 AMMECR1Q9Y4X0 333 aaPredicted RBP10.32□□□□□ -0.76
VPREB3-201ENST00000248948 LEUTXA8MZ59 168 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 OOSP1A8MZH6 123 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 F2RL2O00254 374 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 SLC17A2O00624 439 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 TOR1AO14656 332 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 ORC5O43913 435 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 PDCD6O75340 191 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 MPIG6BO95866 241 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 VSIG8P0DPA2 414 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 GZMHP20718 246 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 CALRP27797 417 aaKnown RBP10.31□□□□□ -0.76
VPREB3-201ENST00000248948 RPS27AP62979 156 aaKnown RBP10.31□□□□□ -0.76
VPREB3-201ENST00000248948 C11orf88Q6PI97 169 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 BAIAP2L2Q6UXY1 529 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 Q6ZSV7 163 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 OR2W3Q7Z3T1 314 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 ZNF554Q86TJ5 538 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 DYNAPQ8N1N2 210 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 DTX3Q8N9I9 347 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 OR4C13Q8NGP0 309 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 SGMS2Q8NHU3 365 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 KCNG3Q8TAE7 436 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 PIFOQ8TCI5 191 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 TAF15Q92804 592 aaKnown RBP eCLIP10.31□□□□□ -0.76
VPREB3-201ENST00000248948 FAM46BQ96A09 425 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 TM2D1Q9BX74 207 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 NPFFR1Q9GZQ6 430 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 MMP28Q9H239 520 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 ETAA1Q9NY74 926 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 DPM3Q9P2X0 92 aa10.31□□□□□ -0.76
VPREB3-201ENST00000248948 FAM172BPA6NC97 362 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 TMEM14DPA8MWL7 114 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 C15orf65H3BRN8 121 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 BUB1B-PAK6H3BSN5 160 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 CCRL2O00421 344 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 CHST1O43916 411 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 FUT3P21217 361 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 NFYBP25208 207 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 PAX6P26367 422 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 PSMD7P51665 324 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 PRRX1P54821 245 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 UNC119Q13432 240 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 LY6EQ16553 131 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 Q3ZCU0 254 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 KCTD21Q4G0X4 260 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 C6orf183Q5T699 404 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 SIGIRRQ6IA17 410 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 CCDC144NLQ6NUI1 221 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 ZNF773Q6PK81 442 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 SPARTQ8N0X7 666 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 OR52M1Q8NGK5 317 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 LINC01006Q8NI28 216 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 GFI1Q99684 422 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 PLGRKTQ9HBL7 147 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 RNF114Q9Y508 228 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 LRRC42Q9Y546 428 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 HILPDAQ9Y5L2 63 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 PEX16Q9Y5Y5 336 aa10.3□□□□□ -0.76
VPREB3-201ENST00000248948 TRDV1A0A1B0GX56 115 aa10.29□□□□□ -0.76
VPREB3-201ENST00000248948 A6NDX4 124 aa10.29□□□□□ -0.76
VPREB3-201ENST00000248948 PDCD5O14737 125 aa10.29□□□□□ -0.76
VPREB3-201ENST00000248948 MT-ND4P03905 459 aa10.29□□□□□ -0.76
VPREB3-201ENST00000248948 MYL9P24844 172 aa10.29□□□□□ -0.76
VPREB3-201ENST00000248948 CHATP28329 748 aa10.29□□□□□ -0.76
VPREB3-201ENST00000248948 BRS3P32247 399 aa10.29□□□□□ -0.76
VPREB3-201ENST00000248948 PROK1P58294 105 aa10.29□□□□□ -0.76
VPREB3-201ENST00000248948 QRFPP83859 136 aa10.29□□□□□ -0.76
VPREB3-201ENST00000248948 RAB11BQ15907 218 aa10.29□□□□□ -0.76
VPREB3-201ENST00000248948 PLA1AQ53H76 456 aa10.29□□□□□ -0.76
VPREB3-201ENST00000248948 TPTE2P1Q5T6R2 138 aa10.29□□□□□ -0.76
VPREB3-201ENST00000248948 C16orf82Q7Z2V1 217 aa10.29□□□□□ -0.76
VPREB3-201ENST00000248948 C8orf31Q8N9H6 132 aa10.29□□□□□ -0.76
VPREB3-201ENST00000248948 MBNL3Q9NUK0 354 aaKnown RBP10.29□□□□□ -0.76
VPREB3-201ENST00000248948 FBLN5Q9UBX5 448 aa10.29□□□□□ -0.76
VPREB3-201ENST00000248948 TRAPPC2LQ9UL33 140 aa10.29□□□□□ -0.76
VPREB3-201ENST00000248948 NBEAL1Q6ZS30 2694 aa10.29□□□□□ -0.76
VPREB3-201ENST00000248948 TRAV1-2A0A0B4J238 106 aa10.28□□□□□ -0.76
VPREB3-201ENST00000248948 LY6LH3BQJ8 138 aa10.28□□□□□ -0.76
VPREB3-201ENST00000248948 J3QR06 171 aa10.28□□□□□ -0.76
VPREB3-201ENST00000248948 ARSBP15848 533 aa10.28□□□□□ -0.76
VPREB3-201ENST00000248948 PSMB9P28065 219 aa10.28□□□□□ -0.76
VPREB3-201ENST00000248948 MNDAP41218 407 aa10.28□□□□□ -0.76
VPREB3-201ENST00000248948 MADCAM1Q13477 382 aa10.28□□□□□ -0.76
VPREB3-201ENST00000248948 NKAPLQ5M9Q1 402 aa10.28□□□□□ -0.76
VPREB3-201ENST00000248948 BRICD5Q6PL45 260 aa10.28□□□□□ -0.76
VPREB3-201ENST00000248948 OR2T6Q8NHC8 308 aa10.28□□□□□ -0.76
VPREB3-201ENST00000248948 TOMM40LQ969M1 308 aa10.28□□□□□ -0.76
VPREB3-201ENST00000248948 ARL11Q969Q4 196 aa10.28□□□□□ -0.76
VPREB3-201ENST00000248948 NEDD4LQ96PU5 975 aa10.28□□□□□ -0.76
VPREB3-201ENST00000248948 URM1Q9BTM9 101 aaKnown RBP10.28□□□□□ -0.76
VPREB3-201ENST00000248948 AK6Q9Y3D8 172 aaKnown RBP10.28□□□□□ -0.76
VPREB3-201ENST00000248948 V9GY05 133 aa10.28□□□□□ -0.76
VPREB3-201ENST00000248948 TRAV39A0A0B4J263 110 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms