RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Arf6P62331 175 aa16.72■□□□□ 0.27
Trim71-201ENSMUST00000111816 Olfr1281Q7TQY6 305 aa16.72■□□□□ 0.27
Trim71-201ENSMUST00000111816 Chst8Q8BQ86 417 aa16.72■□□□□ 0.27
Trim71-201ENSMUST00000111816 Ndrg4Q8BTG7 352 aaKnown RBP16.72■□□□□ 0.27
Trim71-201ENSMUST00000111816 Flywch1Q8CI03 673 aa16.72■□□□□ 0.27
Trim71-201ENSMUST00000111816 Q99K99 313 aa16.72■□□□□ 0.27
Trim71-201ENSMUST00000111816 Olfr1179A2AUS6 307 aa16.72■□□□□ 0.27
Trim71-201ENSMUST00000111816 Gm4884E9PVP9 694 aa16.72■□□□□ 0.27
Trim71-201ENSMUST00000111816 TazI7HJS2 263 aa16.72■□□□□ 0.27
Trim71-201ENSMUST00000111816 Timp2P25785 220 aa16.72■□□□□ 0.27
Trim71-201ENSMUST00000111816 Pafah1b2Q61206 229 aa16.72■□□□□ 0.27
Trim71-201ENSMUST00000111816 Tmem267Q8VDR5 215 aa16.72■□□□□ 0.27
Trim71-201ENSMUST00000111816 Pnpla3Q91WW7 413 aa16.72■□□□□ 0.27
Trim71-201ENSMUST00000111816 Gm13271B1AYH9 182 aa16.72■□□□□ 0.27
Trim71-201ENSMUST00000111816 Hoxb1P17919 297 aa16.72■□□□□ 0.27
Trim71-201ENSMUST00000111816 Ppp1caP62137 330 aaKnown RBP16.72■□□□□ 0.27
Trim71-201ENSMUST00000111816 MENTQ569E4 350 aa16.72■□□□□ 0.27
Trim71-201ENSMUST00000111816 Rdh16f2Q8K3M1 318 aa16.72■□□□□ 0.27
Trim71-201ENSMUST00000111816 Col1a1P11087 1453 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Lclat1Q3UN02 376 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Nmes1Q810Q5 83 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 PthQ9Z0L6 115 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Gm28285A0A087WQ54 102 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Gm45783A0A1B0GT48 74 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 H60cB1B213 197 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Olfr967Q7TRA6 310 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Olfr1413Q8VGU3 323 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Gm29797A0A140LIA7 188 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Olfr1205A2ATJ7 307 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Trabd2bB1ATG9 517 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Gm28305F6U473 122 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Nat8f4G5E8L3 226 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 IghmP01872 454 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Defa2P28309 93 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Sft2d2Q8VD57 159 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Adad2Q9D5P4 478 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Gm6880A3KG45 208 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Gm16519F8VQK7 162 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Cldn34c2J3QNM1 233 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Hoxc5P32043 222 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Cnr1P47746 473 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Fam160a2Q3U2I3 975 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Gpank1Q61858 372 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 SpicQ6P3D7 242 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Olfr1204Q7TR10 309 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Cldn34c1Q8K193 234 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Olfr1459Q8VFV9 307 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Vmn1r34G3XA52 309 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Olfr191L7N1Z8 309 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Tnfrsf9P20334 256 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Fcgr1P26151 404 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Mrps6P58064 125 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Agpat4Q8K4X7 378 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Olfr98Q8VFD9 309 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Vmn1r113G3UWI8 307 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 FiglaO55208 194 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Cbln4Q8BME9 198 aa16.71■□□□□ 0.27
Trim71-201ENSMUST00000111816 Il15raQ60819 263 aa16.71■□□□□ 0.26
Trim71-201ENSMUST00000111816 Elavl4Q61701 385 aaKnown RBP16.71■□□□□ 0.26
Trim71-201ENSMUST00000111816 Prss3Q792Z0 246 aaKnown RBP16.71■□□□□ 0.26
Trim71-201ENSMUST00000111816 Znf32Q80V23 272 aa16.71■□□□□ 0.26
Trim71-201ENSMUST00000111816 SdhbQ9CQA3 282 aa16.71■□□□□ 0.26
Trim71-201ENSMUST00000111816 Pafah1b3Q61205 232 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Tmem204Q7TQI0 226 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Fbxl22Q8C7B6 236 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Tceal5Q8CCT4 200 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Isl2Q9CXV0 359 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Try5Q9QUK9 246 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Try4Q9R0T7 246 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Emg1O35130 244 aaKnown RBP16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Tbx15O70306 602 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Slc46a1Q6PEM8 459 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Smim37Q8BT35 56 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Asb10Q91ZT7 467 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Chrm5Q920H4 532 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Q9DAE7 121 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Col16a1Q8BLX7 1580 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Gm10718D3Z1I7 227 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Gm10721J3QPJ9 223 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Fcgr2P08101 330 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Dnajc30P59041 219 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Slc17a4Q5NCM1 492 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Olfr149Q60888 311 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Nckap5E9QAE1 1909 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Ppp1r3dA2AJW4 279 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 P01650 108 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 P01653 108 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 GypaP14220 168 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Rpusd3Q14AI6 344 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Olfr1000Q7TR99 314 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Prss27Q8BJR6 328 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Gm38303A0A0A6YWW8 100 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Rpl30P62889 115 aaKnown RBP16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Myadml2Q08AU7 307 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 March1Q6NZQ8 289 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Neu4Q8BZL1 478 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Sirt4Q8R216 333 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Olfr646Q8VGW2 312 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Olfr1209Q3SXJ3 310 aa16.7■□□□□ 0.26
Trim71-201ENSMUST00000111816 Olfr1183Q8VFF8 303 aa16.7■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms