RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Gm498D3YYH9 372 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Tmem200bD3Z0P8 284 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Cd200O54901 278 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gpr33O88416 339 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Dhrs3O88876 302 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Lsm6P62313 80 aaKnown RBP11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Defb25Q30KN8 71 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Slc39a7Q31125 476 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 A3galt2Q3V1N9 370 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Hes3Q61657 175 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Rsl1Q7M6Y1 485 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gpr135Q7TQP2 457 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr876Q7TRE4 310 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 TxnipQ8BG60 397 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Fbxw13Q8BI57 466 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Vmn1r235Q8R297 328 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr536Q8VFE9 307 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr1451Q8VFX5 310 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Rtn4rQ99PI8 473 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Sapcd1Q9CY86 146 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 CsQ9CZU6 464 aaKnown RBP11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 MrnipQ9D1F5 335 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Prg4Q9JM99 1054 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Rab25Q9WTL2 213 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Fam53aE9PV82 402 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Zfp688E9Q5M9 274 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Klk1b5P15945 261 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 CtsaP16675 474 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Rpl12P35979 165 aaKnown RBP11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Cd7P50283 210 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 BaxQ07813 192 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 McidasQ3UZ45 379 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 St8sia1Q64687 355 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Sema6dQ76KF0 1073 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Tas2r120Q7M721 295 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Skida1Q80YR3 822 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 9930022D16RikQ8BG27 128 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Clvs2Q8BG92 327 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Zfp52Q8BJ45 724 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Csnk1a1Q8BK63 337 aaKnown RBP11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 MetrnQ8C1Q4 291 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Vmn1r226Q8R2A8 298 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gjc3Q921C1 269 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Ucn3Q924A4 164 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 NubplQ9CWD8 319 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Rcc1lQ9CYF5 461 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Mcts1Q9DB27 181 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Enpp5Q9EQG7 477 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Eif2s3yQ9Z0N2 472 aa11.32□□□□□ -0.6
Nup88-203ENSMUST00000108531 Col4a4Q9QZR9 1682 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gm2026A2ART4 498 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gm8225D3Z536 292 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr905L7N1X5 310 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gm20878L7N244 103 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Zfand5O88878 213 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Eif1P48024 113 aaKnown RBP11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Zdhhc8Q5Y5T5 762 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 AI987944Q7TPX5 406 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Tm2d3Q8BJ83 261 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Parp11Q8CFF0 331 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 BmperQ8CJ69 685 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr796Q8VGJ1 310 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Lnx2Q91XL2 687 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 BmfQ91ZE9 185 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Znf281Q99LI5 893 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 GmfbQ9CQI3 142 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Sun5Q9DA32 373 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Spry4Q9WTP2 300 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Cldn10Q9Z0S6 231 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr1532-ps1A0A0R4J8U2 307 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gprin2D3Z1D7 455 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr430E9Q5F1 317 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gm15130F6PYN5 206 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Susd5G3UW60 619 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr707K7N662 307 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Igsf11P0C673 428 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Vmn1r236Q05A06 334 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Anxa7Q07076 463 aaKnown RBP11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Tmeff1Q6PFE7 372 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 JkampQ8BI36 311 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Arf2Q8BSL7 181 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Mfsd6lQ8R3N2 586 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr361Q8VF16 322 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Lipt2Q9D009 231 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 SlirpQ9D8T7 112 aaKnown RBP11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Fbxo6Q9QZN4 295 aa11.31□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gm21488A0A087WR99 222 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gm11756A2BEJ1 356 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Olfr628K7N6B2 316 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Grcc10O35127 126 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Sod1P08228 154 aaKnown RBP11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Ccl5P30882 91 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Guca2aP33680 116 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gpm6aP35802 278 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Cbr1P48758 277 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Srp9P49962 86 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Sult4a1P63046 284 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 CtseP70269 397 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 SryQ05738 395 aa11.3□□□□□ -0.6
Nup88-203ENSMUST00000108531 Gramd2aQ3V3G7 320 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms