RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 GVQW1Q8N7I0 195 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 RNF126Q9BV68 326 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 CHST5Q9GZS9 411 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 SMCO4Q9NRQ5 59 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 PCNX1Q96RV3 2341 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 A0A1W2PR80 420 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 TMEM14DPA8MWL7 114 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 CD5P06127 495 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 RAB6AP20340 208 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 SERPINA2P20848 420 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 CEACAM8P31997 349 aaPredicted RBP9.92□□□□□ -0.82
CLN6-217ENST00000636964 CD200P41217 278 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 LPAR6P43657 344 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 FGF8P55075 233 aaPredicted RBP9.92□□□□□ -0.82
CLN6-217ENST00000636964 LHFPL2Q6ZUX7 228 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 THNSL2Q86YJ6 484 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 ZSCAN4Q8NAM6 433 aaPredicted RBP9.92□□□□□ -0.82
CLN6-217ENST00000636964 RAB3CQ96E17 227 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 LPAR5Q9H1C0 372 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 APC2O95996 2303 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 ARHGAP21Q5T5U3 1957 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 RPL36A-HNRNPH2H7BZ11 118 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 CDC14BO60729 498 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 ZNF14P17017 642 aaPredicted RBP9.92□□□□□ -0.82
CLN6-217ENST00000636964 ZBTB25P24278 435 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 FOXC1Q12948 553 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 GAMTQ14353 236 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 RSU1Q15404 277 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 ZNF260Q3ZCT1 412 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 RPUSD3Q6P087 351 aaKnown RBP9.92□□□□□ -0.82
CLN6-217ENST00000636964 BAP18Q8IXM2 172 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 TAAR6Q96RI8 345 aa9.92□□□□□ -0.82
CLN6-217ENST00000636964 ZNF2Q9BSG1 426 aaPredicted RBP9.92□□□□□ -0.82
CLN6-217ENST00000636964 NOP16Q9Y3C1 178 aaKnown RBP9.92□□□□□ -0.82
CLN6-217ENST00000636964 RNASEK-C17orf49H0YIS7 233 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 K7EM74 188 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 ANGPTL7O43827 346 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 HLA-AP01891 365 aaKnown RBP9.91□□□□□ -0.82
CLN6-217ENST00000636964 CAV2P51636 162 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 MTCP1P56278 107 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 PPP1R1AQ13522 171 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 SLC22A25Q6T423 547 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 PNLDC1Q8NA58 520 aaKnown RBP9.91□□□□□ -0.82
CLN6-217ENST00000636964 UBAC2Q8NBM4 344 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 SSC4DQ8WTU2 575 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 RNF141Q8WVD5 230 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 PP6455Q8WZ26 134 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 PTX4Q96A99 478 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 SLC6A7Q99884 636 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 MICU1Q9BPX6 476 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 TMEM59Q9BXS4 323 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 CST11Q9H112 138 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 LPAR3Q9UBY5 353 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 SPRY1O43609 319 aaPredicted RBP9.91□□□□□ -0.82
CLN6-217ENST00000636964 YIF1AO95070 293 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 IL18BPO95998 194 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 FCGR3AP08637 254 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 FAM3AP98173 230 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 KRTAP27-1Q3LI81 207 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 CHRFAM7AQ494W8 412 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 IL34Q6ZMJ4 242 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 TRAPPC6BQ86SZ2 158 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 KCNG3Q8TAE7 436 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 PIGCQ92535 297 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 CORO2AQ92828 525 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 ZNF430Q9H8G1 570 aaPredicted RBP9.91□□□□□ -0.82
CLN6-217ENST00000636964 SLC35D1Q9NTN3 355 aa9.91□□□□□ -0.82
CLN6-217ENST00000636964 AGPAT2O15120 278 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 NGFP01138 241 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 TMEM225BP0DP42 221 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 RAB5CP51148 216 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 SELENOVP59797 346 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 OR2B8PP59922 312 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 NKPD1Q17RQ9 610 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 PNLIPRP3Q17RR3 467 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 PLAC9Q5JTB6 97 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 ZADH2Q8N4Q0 377 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 CNEP1R1Q8N9A8 125 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 AQP3Q92482 292 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 AKR1E2Q96JD6 320 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 S100A13Q99584 98 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 TAS2R8Q9NYW2 309 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 CA11O75493 328 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 IGHG3P01860 377 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 ARSJQ5FYB0 599 aaPredicted RBP9.9□□□□□ -0.82
CLN6-217ENST00000636964 FBXW9Q5XUX1 488 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 CD163Q86VB7 1156 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 BATF2Q8N1L9 274 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 OR51T1Q8NGJ9 327 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 FN3KRPQ9HA64 309 aa9.9□□□□□ -0.82
CLN6-217ENST00000636964 IGKV1-27A0A075B6S5 117 aa9.9□□□□□ -0.83
CLN6-217ENST00000636964 CYB5AP00167 134 aa9.9□□□□□ -0.83
CLN6-217ENST00000636964 AMY2AP04746 511 aa9.9□□□□□ -0.83
CLN6-217ENST00000636964 HLA-GP17693 338 aa9.9□□□□□ -0.83
CLN6-217ENST00000636964 TMEM50BP56557 158 aa9.9□□□□□ -0.83
CLN6-217ENST00000636964 ARL6IP1Q15041 203 aa9.9□□□□□ -0.83
CLN6-217ENST00000636964 CD300LFQ8TDQ1 290 aa9.9□□□□□ -0.83
CLN6-217ENST00000636964 SMIM8Q96KF7 97 aa9.9□□□□□ -0.83
CLN6-217ENST00000636964 RNF2Q99496 336 aa9.9□□□□□ -0.83
CLN6-217ENST00000636964 ELOVL1Q9BW60 279 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms