RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 ANKRD55Q3KP44 614 aa13.84□□□□□ -0.19
LDB3-208ENST00000623007 KCNRGQ8N5I3 272 aa13.84□□□□□ -0.19
LDB3-208ENST00000623007 HS3ST6Q96QI5 342 aa13.84□□□□□ -0.19
LDB3-208ENST00000623007 ASF1BQ9NVP2 202 aa13.84□□□□□ -0.19
LDB3-208ENST00000623007 IL36RNQ9UBH0 155 aa13.84□□□□□ -0.19
LDB3-208ENST00000623007 DNAJB11Q9UBS4 358 aa13.84□□□□□ -0.19
LDB3-208ENST00000623007 TRAPPC2LQ9UL33 140 aa13.84□□□□□ -0.19
LDB3-208ENST00000623007 TMED3Q9Y3Q3 217 aa13.84□□□□□ -0.19
LDB3-208ENST00000623007 A0A1B0GW55 424 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 H0YL77 283 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 CCSO14618 274 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 RLN2P04090 185 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 DUX4L2P0CJ85 424 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 DUX4L3P0CJ86 424 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 DUX4L4P0CJ87 422 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 DUX4L5P0CJ88 424 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 DUX4L6P0CJ89 424 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 DUX4L7P0CJ90 424 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 LYL1P12980 280 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 SSTR2P30874 369 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 HTR2BP41595 481 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 UBA52P62987 128 aaKnown RBP13.83□□□□□ -0.2
LDB3-208ENST00000623007 SMCO1Q147U7 214 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 C6orf183Q5T699 404 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 LIAT1Q6ZQX7 453 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 Q6ZR03 302 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 C11orf53Q8IXP5 236 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 BATF2Q8N1L9 274 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 LRRC46Q96FV0 321 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 SEC22AQ96IW7 307 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 AKR1E2Q96JD6 320 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 RAB9BQ9NP90 201 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 DUX4Q9UBX2 424 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 DUSP13Q9UII6 198 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 OR2W1Q9Y3N9 320 aa13.83□□□□□ -0.2
LDB3-208ENST00000623007 MPPED1O15442 326 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 SCTP09683 121 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 FAM87AP0C7U9 286 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 FAM27E3Q08E93 113 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 IGSF11Q5DX21 431 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 CLLU1Q5K131 121 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 PRSS54Q6PEW0 395 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 OR2Z1Q8NG97 314 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 TMEM171Q8WVE6 324 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 IL22RA2Q969J5 263 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 SPIN2AQ99865 258 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 SPIN2BQ9BPZ2 258 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 LIME1Q9H400 295 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 RAXQ9Y2V3 346 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 SPTBN4Q9H254 2564 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 hCG_1807616A0A1W2PRN6 198 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 OOEPA6NGQ2 149 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 SIRPB1O00241 398 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 HSPB6O14558 160 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 BET1O15155 118 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 TMEM187Q14656 261 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 LDLRAD3Q86YD5 345 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 H1FOOQ8IZA3 346 aaPredicted RBP13.82□□□□□ -0.2
LDB3-208ENST00000623007 ST6GALNAC3Q8NDV1 305 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 PHYHIPLQ96FC7 376 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 SLC5A7Q9GZV3 580 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 MSL2Q9HCI7 577 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 IL19Q9UHD0 177 aa13.82□□□□□ -0.2
LDB3-208ENST00000623007 SRRM5B3KS81 715 aa13.81□□□□□ -0.2
LDB3-208ENST00000623007 EIF5AP63241 154 aaKnown RBP13.81□□□□□ -0.2
LDB3-208ENST00000623007 EXOSC2Q13868 293 aaKnown RBP13.81□□□□□ -0.2
LDB3-208ENST00000623007 HMGN3Q15651 99 aa13.81□□□□□ -0.2
LDB3-208ENST00000623007 MSMO1Q15800 293 aa13.81□□□□□ -0.2
LDB3-208ENST00000623007 Q6ZPA2 131 aa13.81□□□□□ -0.2
LDB3-208ENST00000623007 MRPL24Q96A35 216 aaKnown RBP13.81□□□□□ -0.2
LDB3-208ENST00000623007 DMRTA2Q96SC8 542 aa13.81□□□□□ -0.2
LDB3-208ENST00000623007 GSX2Q9BZM3 304 aa13.81□□□□□ -0.2
LDB3-208ENST00000623007 NCOR1P1Q9H4R4 102 aa13.81□□□□□ -0.2
LDB3-208ENST00000623007 C3orf85A0A1B0GTC6 90 aa13.8□□□□□ -0.2
LDB3-208ENST00000623007 BCL2L11O43521 198 aa13.8□□□□□ -0.2
LDB3-208ENST00000623007 CDS2O95674 445 aa13.8□□□□□ -0.2
LDB3-208ENST00000623007 OR5AC1P0C628 307 aa13.8□□□□□ -0.2
LDB3-208ENST00000623007 GNRHRP30968 328 aa13.8□□□□□ -0.2
LDB3-208ENST00000623007 ID4P47928 161 aa13.8□□□□□ -0.2
LDB3-208ENST00000623007 IAH1Q2TAA2 248 aaPredicted RBP13.8□□□□□ -0.2
LDB3-208ENST00000623007 LRRC37A5PQ49AS3 106 aa13.8□□□□□ -0.2
LDB3-208ENST00000623007 PCSK4Q6UW60 755 aa13.8□□□□□ -0.2
LDB3-208ENST00000623007 OR8H3Q8N146 312 aa13.8□□□□□ -0.2
LDB3-208ENST00000623007 ZBTB34Q8NCN2 500 aa13.8□□□□□ -0.2
LDB3-208ENST00000623007 BVESQ8NE79 360 aa13.8□□□□□ -0.2
LDB3-208ENST00000623007 SCARB1Q8WTV0 552 aa13.8□□□□□ -0.2
LDB3-208ENST00000623007 LRRC29Q8WV35 223 aa13.8□□□□□ -0.2
LDB3-208ENST00000623007 ABHD14BQ96IU4 210 aa13.8□□□□□ -0.2
LDB3-208ENST00000623007 RDH8Q9NYR8 311 aa13.8□□□□□ -0.2
LDB3-208ENST00000623007 KIF25Q9UIL4 384 aa13.8□□□□□ -0.2
LDB3-208ENST00000623007 URB1O60287 2271 aaKnown RBP13.8□□□□□ -0.2
LDB3-208ENST00000623007 ADH4P08319 380 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 HOXB5P09067 269 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 ASCL1P50553 236 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 LUMP51884 338 aaPredicted RBP13.79□□□□□ -0.2
LDB3-208ENST00000623007 IL15RAQ13261 267 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 ESPL1Q14674 2120 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 HERPUD1Q15011 391 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 PHLDA2Q53GA4 152 aa13.79□□□□□ -0.2
LDB3-208ENST00000623007 RELL2Q8NC24 303 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms