RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 MYPOPQ86VE0 399 aaPredicted RBP18.23■□□□□ 0.51
SGMS1-210ENST00000619438 PPP1R1CQ8WVI7 109 aa18.23■□□□□ 0.51
SGMS1-210ENST00000619438 SULT4A1Q9BR01 284 aa18.23■□□□□ 0.51
SGMS1-210ENST00000619438 NMES1Q9C002 83 aa18.23■□□□□ 0.51
SGMS1-210ENST00000619438 GPR160Q9UJ42 338 aa18.23■□□□□ 0.51
SGMS1-210ENST00000619438 ST3GAL6Q9Y274 331 aa18.23■□□□□ 0.51
SGMS1-210ENST00000619438 USF3Q68DE3 2245 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 IGKV1D-8A0A087WSZ0 117 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 CCSO14618 274 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 GEMIN2O14893 280 aaKnown RBP18.22■□□□□ 0.51
SGMS1-210ENST00000619438 FCGR3AP08637 254 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 RPS2P15880 293 aaKnown RBP18.22■□□□□ 0.51
SGMS1-210ENST00000619438 ARPC4P59998 168 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 ZNF660Q6AZW8 331 aaPredicted RBP18.22■□□□□ 0.51
SGMS1-210ENST00000619438 PRSS57Q6UWY2 283 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 CALHM1Q8IU99 346 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 KCNRGQ8N5I3 272 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 COQ8AQ8NI60 647 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 MAFIPQ8WZ33 124 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 STARD10Q9Y365 291 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 ACANP16112 2415 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 IGHV2OR16-5A0A0B4J2B6 119 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 J3QW42 95 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 PAX1P15863 534 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 CCNOP22674 350 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 APLNRP35414 380 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 PIGYQ3MUY2 71 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 DHRS11Q6UWP2 260 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 KCTD9Q7L273 389 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 ZDHHC23Q8IYP9 409 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 SCARB1Q8WTV0 552 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 HDHD3Q9BSH5 251 aaPredicted RBP18.22■□□□□ 0.51
SGMS1-210ENST00000619438 PAPOLGQ9BWT3 736 aaKnown RBP18.22■□□□□ 0.51
SGMS1-210ENST00000619438 SPEF1Q9Y4P9 236 aa18.22■□□□□ 0.51
SGMS1-210ENST00000619438 ZNF14P17017 642 aaPredicted RBP18.21■□□□□ 0.51
SGMS1-210ENST00000619438 FUT3P21217 361 aa18.21■□□□□ 0.51
SGMS1-210ENST00000619438 OR5A2Q8NGI9 324 aa18.21■□□□□ 0.51
SGMS1-210ENST00000619438 HPSE2Q8WWQ2 592 aa18.21■□□□□ 0.51
SGMS1-210ENST00000619438 SEC22AQ96IW7 307 aa18.21■□□□□ 0.51
SGMS1-210ENST00000619438 ZNF75AQ96N20 296 aa18.21■□□□□ 0.51
SGMS1-210ENST00000619438 CITED4Q96RK1 184 aa18.21■□□□□ 0.51
SGMS1-210ENST00000619438 NECAP2Q9NVZ3 263 aa18.21■□□□□ 0.51
SGMS1-210ENST00000619438 C14orf166Q9Y224 244 aaKnown RBP18.21■□□□□ 0.51
SGMS1-210ENST00000619438 CTSDP07339 412 aaPredicted RBP18.2■□□□□ 0.5
SGMS1-210ENST00000619438 CCL2P13500 99 aa18.2■□□□□ 0.5
SGMS1-210ENST00000619438 SERPINF1P36955 418 aa18.2■□□□□ 0.5
SGMS1-210ENST00000619438 SLC25A26Q70HW3 274 aa18.2■□□□□ 0.5
SGMS1-210ENST00000619438 OR5L1Q8NGL2 311 aa18.2■□□□□ 0.5
SGMS1-210ENST00000619438 Q96MF0 132 aa18.2■□□□□ 0.5
SGMS1-210ENST00000619438 TMUB1Q9BVT8 246 aa18.2■□□□□ 0.5
SGMS1-210ENST00000619438 MED9Q9NWA0 146 aa18.2■□□□□ 0.5
SGMS1-210ENST00000619438 TRBV6-7A0A0A0MS04 114 aa18.19■□□□□ 0.5
SGMS1-210ENST00000619438 OR4A8P0C604 315 aa18.19■□□□□ 0.5
SGMS1-210ENST00000619438 GLRA1P23415 457 aa18.19■□□□□ 0.5
SGMS1-210ENST00000619438 ACOT7LQ6ZUV0 252 aa18.19■□□□□ 0.5
SGMS1-210ENST00000619438 KRTAP1-3Q8IUG1 177 aa18.19■□□□□ 0.5
SGMS1-210ENST00000619438 FGF23Q9GZV9 251 aaPredicted RBP18.19■□□□□ 0.5
SGMS1-210ENST00000619438 ZNF581Q9P0T4 197 aa18.19■□□□□ 0.5
SGMS1-210ENST00000619438 MPC1Q9Y5U8 109 aa18.19■□□□□ 0.5
SGMS1-210ENST00000619438 MTORP42345 2549 aa18.19■□□□□ 0.5
SGMS1-210ENST00000619438 PLCE1Q9P212 2302 aa18.19■□□□□ 0.5
SGMS1-210ENST00000619438 CD300LBA8K4G0 201 aa18.18■□□□□ 0.5
SGMS1-210ENST00000619438 NGFP01138 241 aa18.18■□□□□ 0.5
SGMS1-210ENST00000619438 OR5H8P0DN80 308 aa18.18■□□□□ 0.5
SGMS1-210ENST00000619438 RRASP10301 218 aa18.18■□□□□ 0.5
SGMS1-210ENST00000619438 PSMB6P28072 239 aa18.18■□□□□ 0.5
SGMS1-210ENST00000619438 WNT5AP41221 380 aa18.18■□□□□ 0.5
SGMS1-210ENST00000619438 SRSF7Q16629 238 aaKnown RBP eCLIP18.18■□□□□ 0.5
SGMS1-210ENST00000619438 Q6ZS49 121 aa18.18■□□□□ 0.5
SGMS1-210ENST00000619438 MKXQ8IYA7 352 aa18.18■□□□□ 0.5
SGMS1-210ENST00000619438 NUP37Q8NFH4 326 aa18.18■□□□□ 0.5
SGMS1-210ENST00000619438 THAP6Q8TBB0 222 aa18.18■□□□□ 0.5
SGMS1-210ENST00000619438 ZNF2Q9BSG1 426 aaPredicted RBP18.18■□□□□ 0.5
SGMS1-210ENST00000619438 C12orf4Q9NQ89 552 aa18.18■□□□□ 0.5
SGMS1-210ENST00000619438 SETD2Q9BYW2 2564 aaPredicted RBP18.18■□□□□ 0.5
SGMS1-210ENST00000619438 FAM25EA8MYX2 175 aa18.18■□□□□ 0.5
SGMS1-210ENST00000619438 FGF12P61328 243 aa18.18■□□□□ 0.5
SGMS1-210ENST00000619438 UBA52P62987 128 aaKnown RBP18.18■□□□□ 0.5
SGMS1-210ENST00000619438 BAMBIQ13145 260 aa18.18■□□□□ 0.5
SGMS1-210ENST00000619438 C11orf71Q6IPW1 123 aa18.18■□□□□ 0.5
SGMS1-210ENST00000619438 SLC30A7Q8NEW0 376 aa18.18■□□□□ 0.5
SGMS1-210ENST00000619438 ZNF286AQ9HBT8 521 aa18.18■□□□□ 0.5
SGMS1-210ENST00000619438 RNF222A6NCQ9 220 aa18.17■□□□□ 0.5
SGMS1-210ENST00000619438 C5orf51A6NDU8 294 aa18.17■□□□□ 0.5
SGMS1-210ENST00000619438 NDUFS7O75251 213 aa18.17■□□□□ 0.5
SGMS1-210ENST00000619438 PGAM2P15259 253 aa18.17■□□□□ 0.5
SGMS1-210ENST00000619438 PI3P19957 117 aa18.17■□□□□ 0.5
SGMS1-210ENST00000619438 NPBWR2P48146 333 aa18.17■□□□□ 0.5
SGMS1-210ENST00000619438 ADIPOQQ15848 244 aa18.17■□□□□ 0.5
SGMS1-210ENST00000619438 ANKRD55Q3KP44 614 aa18.17■□□□□ 0.5
SGMS1-210ENST00000619438 ANGPTL6Q8NI99 470 aa18.17■□□□□ 0.5
SGMS1-210ENST00000619438 HIST1H2AAQ96QV6 131 aa18.17■□□□□ 0.5
SGMS1-210ENST00000619438 BARX1Q9HBU1 254 aaPredicted RBP18.17■□□□□ 0.5
SGMS1-210ENST00000619438 CHMP1AQ9HD42 196 aaPredicted RBP18.17■□□□□ 0.5
SGMS1-210ENST00000619438 OR5B21A6NL26 309 aa18.16■□□□□ 0.5
SGMS1-210ENST00000619438 B9A039 149 aa18.16■□□□□ 0.5
SGMS1-210ENST00000619438 SLC9A3R2Q15599 337 aa18.16■□□□□ 0.5
SGMS1-210ENST00000619438 MPV17LQ2QL34 196 aa18.16■□□□□ 0.5
SGMS1-210ENST00000619438 OR5P3Q8WZ94 311 aa18.16■□□□□ 0.5
SGMS1-210ENST00000619438 ZNF442Q9H7R0 627 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms