RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 NKX2-4Q9H2Z4 354 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 UBTD1Q9HAC8 227 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 GPR35Q9HC97 309 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 TCFL5Q9UL49 500 aa10.72□□□□□ -0.69
MATR3-227ENST00000618441 SHISA7A6NL88 538 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 CSRP1P21291 193 aaKnown RBP10.71□□□□□ -0.69
MATR3-227ENST00000618441 EXT1Q16394 746 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 ZNF506Q5JVG8 444 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 ZNF440Q8IYI8 595 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 VN1R2Q8NFZ6 395 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 LHX4Q969G2 390 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 MOB3AQ96BX8 217 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 ANGPTL4Q9BY76 406 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 PARLQ9H300 379 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 PELI2Q9HAT8 420 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 ZNF716A6NP11 495 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 HIST1H1DP16402 221 aaKnown RBP10.71□□□□□ -0.69
MATR3-227ENST00000618441 ZNF43P17038 809 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 DUSP1P28562 367 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 PLA2G5P39877 138 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 AMTP48728 403 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 MGAT2Q10469 447 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 LY6G5CQ5SRR4 150 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 CXorf40AQ8TE69 158 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 RBKSQ9H477 322 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 PLEKHJ1Q9NW61 149 aa10.71□□□□□ -0.69
MATR3-227ENST00000618441 FRMPD3Q5JV73 1810 aa10.71□□□□□ -0.7
MATR3-227ENST00000618441 NCOR1O75376 2440 aa10.71□□□□□ -0.7
MATR3-227ENST00000618441 TMEM177Q53S58 311 aa10.71□□□□□ -0.7
MATR3-227ENST00000618441 PLAC9Q5JTB6 97 aa10.71□□□□□ -0.7
MATR3-227ENST00000618441 ABHD12BQ7Z5M8 362 aaPredicted RBP10.71□□□□□ -0.7
MATR3-227ENST00000618441 TSTD1Q8NFU3 115 aa10.71□□□□□ -0.7
MATR3-227ENST00000618441 DAZLQ92904 295 aaKnown RBP10.71□□□□□ -0.7
MATR3-227ENST00000618441 PGPEP1Q9NXJ5 209 aa10.71□□□□□ -0.7
MATR3-227ENST00000618441 COA3Q9Y2R0 106 aaPredicted RBP10.71□□□□□ -0.7
MATR3-227ENST00000618441 INSL6Q9Y581 213 aa10.71□□□□□ -0.7
MATR3-227ENST00000618441 A0A1B0GV72 72 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 APODP05090 189 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 ZNF728P0DKX0 622 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 LTBRP36941 435 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 TMEM267Q0VDI3 215 aaPredicted RBP10.7□□□□□ -0.7
MATR3-227ENST00000618441 Q6ZWC4 215 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 C20orf196Q8IYI0 205 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 LRIT1Q9P2V4 623 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 LYPD3O95274 346 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 CDS2O95674 445 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 CTSBP07858 339 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 BCL2P10415 239 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 FBXW4P57775 412 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 PRDX1Q06830 199 aaKnown RBP10.7□□□□□ -0.7
MATR3-227ENST00000618441 ZNF684Q5T5D7 378 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 WDR74Q6RFH5 385 aaPredicted RBP10.7□□□□□ -0.7
MATR3-227ENST00000618441 CDRT4Q8N9R6 151 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 SLC39A9Q9NUM3 307 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 UQCR10Q9UDW1 63 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 SLC5A6Q9Y289 635 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 MYO16Q9Y6X6 1858 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 PHF3Q92576 2039 aaKnown RBP10.7□□□□□ -0.7
MATR3-227ENST00000618441 KIAA1324LA8MWY0 1029 aaPredicted RBP10.7□□□□□ -0.7
MATR3-227ENST00000618441 CTSDP07339 412 aaPredicted RBP10.7□□□□□ -0.7
MATR3-227ENST00000618441 CRISP2P16562 243 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 IL12BP29460 328 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 GPM6BQ13491 265 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 MSMO1Q15800 293 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 FAM90A2PQ658T7 463 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 ZNF695Q8IW36 515 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 FAM58AQ8N1B3 248 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 ZNF775Q96BV0 537 aaPredicted RBP10.7□□□□□ -0.7
MATR3-227ENST00000618441 DIDO1Q9BTC0 2240 aaKnown RBP10.7□□□□□ -0.7
MATR3-227ENST00000618441 SHANK1Q9Y566 2161 aa10.7□□□□□ -0.7
MATR3-227ENST00000618441 IGSF23A1L1A6 192 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 SH2D1BO14796 132 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 IFNA1P01562 189 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 LYL1P12980 280 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 TAS2R46P59540 309 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 C1orf140Q5VVS0 124 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 VWA1Q6PCB0 445 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 C6orf201Q7Z4U5 140 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 ZNF547Q8IVP9 402 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 LMLNQ96KR4 655 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 SLC46A1Q96NT5 459 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 LYRM2Q9NU23 88 aaPredicted RBP10.69□□□□□ -0.7
MATR3-227ENST00000618441 ADAM29Q9UKF5 820 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 COX11Q9Y6N1 276 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 LOC102723971A0A1B0GUV8 181 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 B4DGG1 531 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 LILRA1O75019 489 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 SERF1AO75920 110 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 SUCLG1P53597 346 aaKnown RBP10.69□□□□□ -0.7
MATR3-227ENST00000618441 RPS18P62269 152 aaKnown RBP10.69□□□□□ -0.7
MATR3-227ENST00000618441 PDCD1Q15116 288 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 OR5D14Q8NGL3 314 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 OR51E1Q8TCB6 317 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 ORAOV1Q8WV07 137 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 ADAT3Q96EY9 351 aaPredicted RBP10.69□□□□□ -0.7
MATR3-227ENST00000618441 TSPAN32Q96QS1 320 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 SMDT1Q9H4I9 107 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 YAE1D1Q9NRH1 226 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 STARD5Q9NSY2 213 aa10.69□□□□□ -0.7
MATR3-227ENST00000618441 CLN8Q9UBY8 286 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms