RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 LSM2Q9Y333 95 aaKnown RBP10.85□□□□□ -0.67
SENP3-209ENST00000610454 TMEM30CPA0ZSE6 113 aa10.84□□□□□ -0.67
SENP3-209ENST00000610454 PIN1P1O15428 100 aa10.84□□□□□ -0.67
SENP3-209ENST00000610454 CRTAPO75718 401 aaPredicted RBP10.84□□□□□ -0.67
SENP3-209ENST00000610454 MMP23AO75900 390 aa10.84□□□□□ -0.67
SENP3-209ENST00000610454 PSMA1P25786 263 aaKnown RBP10.84□□□□□ -0.67
SENP3-209ENST00000610454 GABRA5P31644 462 aa10.84□□□□□ -0.67
SENP3-209ENST00000610454 RBM39Q14498 530 aaKnown RBP10.84□□□□□ -0.67
SENP3-209ENST00000610454 IRF3Q14653 427 aa10.84□□□□□ -0.67
SENP3-209ENST00000610454 RSBN1Q5VWQ0 802 aaPredicted RBP10.84□□□□□ -0.67
SENP3-209ENST00000610454 SLC35E4Q6ICL7 350 aa10.84□□□□□ -0.67
SENP3-209ENST00000610454 Q6ZSV7 163 aa10.84□□□□□ -0.67
SENP3-209ENST00000610454 CEACAM19Q7Z692 300 aa10.84□□□□□ -0.67
SENP3-209ENST00000610454 LINC01006Q8NI28 216 aa10.84□□□□□ -0.67
SENP3-209ENST00000610454 MRGPRDQ8TDS7 321 aa10.84□□□□□ -0.67
SENP3-209ENST00000610454 PHYHIPQ92561 330 aa10.84□□□□□ -0.67
SENP3-209ENST00000610454 TMEM203Q969S6 136 aa10.84□□□□□ -0.67
SENP3-209ENST00000610454 AJUBAQ96IF1 538 aa10.84□□□□□ -0.67
SENP3-209ENST00000610454 NPFFR1Q9GZQ6 430 aa10.84□□□□□ -0.67
SENP3-209ENST00000610454 CST11Q9H112 138 aa10.84□□□□□ -0.67
SENP3-209ENST00000610454 DPM3Q9P2X0 92 aa10.84□□□□□ -0.67
SENP3-209ENST00000610454 GHRLQ9UBU3 117 aa10.84□□□□□ -0.67
SENP3-209ENST00000610454 A0A1W2PP11 408 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 LEUTXA8MZ59 168 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 MCRIP1C9JLW8 97 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 TSPAN9O75954 239 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 IL1AP01583 271 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 UBBP0CG47 229 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 MGMTP16455 207 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 PAX5Q02548 391 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 MLLT11Q13015 90 aaPredicted RBP10.83□□□□□ -0.68
SENP3-209ENST00000610454 INSL4Q14641 139 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 LTC4SQ16873 150 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 FAM27D1Q5T7N8 215 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 OR13A1Q8NGR1 328 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 OR2T6Q8NHC8 308 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 PLPPR1Q8TBJ4 325 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 CAPSLQ8WWF8 208 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 SELENOIQ9C0D9 397 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 BANF2Q9H503 90 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 C16orf95Q9H693 158 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 ISYNA1Q9NPH2 558 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 IDI2-AS1Q9NZ38 188 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 TCF19Q9Y242 345 aa10.83□□□□□ -0.68
SENP3-209ENST00000610454 AMMECR1Q9Y4X0 333 aaPredicted RBP10.83□□□□□ -0.68
SENP3-209ENST00000610454 NBEAL1Q6ZS30 2694 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 FAM90A10PA6NDY2 464 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 FAM90A18PA6NE21 464 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 FAM90A16PA6NEW6 464 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 FAM90A20PA6NIJ5 464 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 FAM90A7PA6NKC0 464 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 FAM90A22PA8MWA6 464 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 FAM90A12PA8MX19 464 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 FAM90A5PA8MXJ8 464 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 FAM90A23PA8MXZ1 464 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 AIPO00170 330 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 ARL6IP5O75915 188 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 FAM90A15PP0C7V4 464 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 FAM90A13PP0C7W8 464 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 FAM90A14PP0C7W9 464 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 FAM90A24PP0C7X0 464 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 SRMP19623 302 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 GZMHP20718 246 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 CD34P28906 385 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 BRS3P32247 399 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 RAB13P51153 203 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 TPBGQ13641 420 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 TBCEQ15813 527 aaPredicted RBP10.82□□□□□ -0.68
SENP3-209ENST00000610454 C17orf58Q2M2W7 97 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 ARSJQ5FYB0 599 aaPredicted RBP10.82□□□□□ -0.68
SENP3-209ENST00000610454 RAB12Q6IQ22 244 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 UNQ9370/PRO34162Q6UXP9 181 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 BAIAP2L2Q6UXY1 529 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 DYNAPQ8N1N2 210 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 OR4P4Q8NGL7 312 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 OR9G1Q8NH87 305 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 FAM46BQ96A09 425 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 KIRREL1Q96J84 757 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 MGLLQ99685 303 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 RANBP3Q9H6Z4 567 aaPredicted RBP10.82□□□□□ -0.68
SENP3-209ENST00000610454 ZNF286AQ9HBT8 521 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 RAB9BQ9NP90 201 aa10.82□□□□□ -0.68
SENP3-209ENST00000610454 A0A087X0M5 115 aa10.81□□□□□ -0.68
SENP3-209ENST00000610454 A0A1B0GX30 115 aa10.81□□□□□ -0.68
SENP3-209ENST00000610454 MPIG6BO95866 241 aa10.81□□□□□ -0.68
SENP3-209ENST00000610454 UCHL1P09936 223 aa10.81□□□□□ -0.68
SENP3-209ENST00000610454 CPEP16870 476 aa10.81□□□□□ -0.68
SENP3-209ENST00000610454 SSTR5P35346 364 aa10.81□□□□□ -0.68
SENP3-209ENST00000610454 GDNFP39905 211 aa10.81□□□□□ -0.68
SENP3-209ENST00000610454 MNDAP41218 407 aa10.81□□□□□ -0.68
SENP3-209ENST00000610454 RANBP1P43487 201 aa10.81□□□□□ -0.68
SENP3-209ENST00000610454 MAP2K4P45985 399 aa10.81□□□□□ -0.68
SENP3-209ENST00000610454 DYNLT3P51808 116 aa10.81□□□□□ -0.68
SENP3-209ENST00000610454 HLA-DRB5Q30154 266 aa10.81□□□□□ -0.68
SENP3-209ENST00000610454 LDLRAD2Q5SZI1 272 aa10.81□□□□□ -0.68
SENP3-209ENST00000610454 CCDC144NLQ6NUI1 221 aa10.81□□□□□ -0.68
SENP3-209ENST00000610454 C11orf88Q6PI97 169 aa10.81□□□□□ -0.68
SENP3-209ENST00000610454 ZNF367Q7RTV3 350 aa10.81□□□□□ -0.68
SENP3-209ENST00000610454 TMEM219Q86XT9 240 aa10.81□□□□□ -0.68
SENP3-209ENST00000610454 OR10A7Q8NGE5 316 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms