RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 LRRC29Q8WV35 223 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 WDR13Q9H1Z4 485 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 SORL1Q92673 2214 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 K7ERU9 68 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 ZNF253O75346 499 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 CXCL3P19876 107 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 OR4A47Q6IF82 309 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 ABHD14AQ9BUJ0 271 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 MED13Q9UHV7 2174 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 POLR2GP62487 172 aaKnown RBP eCLIP8.5□□□□□ -1.05
CSMD1-217ENST00000602723 COL5A1-AS1Q5SY13 56 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 NTMQ9P121 344 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 PLXND1Q9Y4D7 1925 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 IGHV3-13P01766 116 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 IGHV3-7P01780 117 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 SLC35E3Q7Z769 313 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 STPG2Q8N412 459 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 OR6C3Q9NZP0 311 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 OPN4Q9UHM6 478 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 ANXA10Q9UJ72 324 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 FBLL1A6NHQ2 334 aaKnown RBP8.5□□□□□ -1.05
CSMD1-217ENST00000602723 FAM74A7A6NL05 159 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 OR10J1P30954 320 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 STRCP1A6NGW2 1772 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 CXorf1O96002 111 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 ZNF770Q6IQ21 691 aaPredicted RBP8.5□□□□□ -1.05
CSMD1-217ENST00000602723 LINC01465Q8N7H1 131 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 ADTRPQ96IZ2 230 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 IL17BQ9UHF5 180 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 HYAL3O43820 417 aaPredicted RBP8.5□□□□□ -1.05
CSMD1-217ENST00000602723 CD81P60033 236 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 VN1R17PQ8TDU5 208 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 ADAT3Q96EY9 351 aaPredicted RBP8.5□□□□□ -1.05
CSMD1-217ENST00000602723 PRR13Q9NZ81 148 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 H3BQ15 152 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 HOXA6P31267 233 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 WNT3P56703 355 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 DEGS2Q6QHC5 323 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 TM4SF19Q96DZ7 209 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 GNRHR2Q96P88 292 aa8.5□□□□□ -1.05
CSMD1-217ENST00000602723 MEX3AA1L020 520 aaKnown RBP8.49□□□□□ -1.05
CSMD1-217ENST00000602723 ZNF32P17041 273 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 NUBPLQ8TB37 319 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 CCL17Q92583 94 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 NEU3Q9UQ49 428 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 NAV3Q8IVL0 2385 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 SFTPA2Q8IWL1 248 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 SFTPA1Q8IWL2 248 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 MYEOVQ96EZ4 313 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 RBM38Q9H0Z9 239 aaKnown RBP8.49□□□□□ -1.05
CSMD1-217ENST00000602723 SONP18583 2426 aaKnown RBP8.49□□□□□ -1.05
CSMD1-217ENST00000602723 COX7A1P24310 79 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 BRS3P32247 399 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 UBE2V2Q15819 145 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 ANKRD55Q3KP44 614 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 FAM219BQ5XKK7 198 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 WDR74Q6RFH5 385 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-217ENST00000602723 CLEC18BQ6UXF7 455 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 THSD4Q6ZMP0 1018 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 SLC25A42Q86VD7 318 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 R3HDM4Q96D70 268 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 ZNF107Q9UII5 783 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-217ENST00000602723 HSF4Q9ULV5 492 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 NYNRINQ9P2P1 1898 aaKnown RBP8.49□□□□□ -1.05
CSMD1-217ENST00000602723 TANC2Q9HCD6 1990 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 SMPD2O60906 423 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 MS4A7Q9GZW8 240 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-217ENST00000602723 SLC26A1Q9H2B4 701 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 A0A1B0GTH9 108 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 A0A1W2PPC4 97 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 PSG5Q15238 335 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 VSTM2AQ8TAG5 236 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 ASB10Q8WXI3 467 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 OR5R1Q8NH85 324 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 PERPQ96FX8 193 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 TMEM38BQ9NVV0 291 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 ZNF256Q9Y2P7 627 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-217ENST00000602723 C7orf77A4D0Y5 90 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 CHST1O43916 411 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 NKX2-2O95096 273 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 TNFAIP6P98066 277 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-217ENST00000602723 NSUN5P2Q63ZY6 315 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 SNRNP40Q96DI7 357 aaKnown RBP8.49□□□□□ -1.05
CSMD1-217ENST00000602723 TBX15Q96SF7 602 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 PTPN13Q12923 2485 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 OOEPA6NGQ2 149 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 HIST1H1EP10412 219 aaKnown RBP8.49□□□□□ -1.05
CSMD1-217ENST00000602723 SRFP11831 508 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 LGALS7P47929 136 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 DLX1P56177 255 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 SMAD4Q13485 552 aaKnown RBP8.49□□□□□ -1.05
CSMD1-217ENST00000602723 ZNF880Q6PDB4 577 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 MOGAT1Q96PD6 335 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 RASL11BQ9BPW5 248 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 SYNGR2O43760 224 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 CRYBA1P05813 215 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 IL11RAQ14626 422 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 OR8B12Q8NGG6 310 aa8.49□□□□□ -1.05
CSMD1-217ENST00000602723 CD1BP29016 333 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 RGP1Q92546 391 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms