RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 EVPLQ92817 2033 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 TRAV38-1A0A0B4J264 116 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 IFITM10A6NMD0 228 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 COL9A1P20849 921 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 SLC35E3Q7Z769 313 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 MAFAQ8NHW3 353 aaPredicted RBP10.41□□□□□ -0.74
SCN8A-208ENST00000599343 MYOZ3Q8TDC0 251 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 TBX15Q96SF7 602 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 RBM38Q9H0Z9 239 aaKnown RBP10.41□□□□□ -0.74
SCN8A-208ENST00000599343 FLRT3Q9NZU0 649 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 R4GN57 208 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 TOPAZ1Q8N9V7 1692 aa10.41□□□□□ -0.74
SCN8A-208ENST00000599343 M0R3E3 92 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 OGG1O15527 345 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 HYAL1Q12794 435 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 TRA2AQ13595 282 aaKnown RBP eCLIP10.4□□□□□ -0.74
SCN8A-208ENST00000599343 LGALSLQ3ZCW2 172 aaPredicted RBP10.4□□□□□ -0.74
SCN8A-208ENST00000599343 ARL6IP6Q8N6S5 226 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 MRGPRX3Q96LB0 322 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 SOSTQ9BQB4 213 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 FAM60AQ9NP50 221 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 HSPB8Q9UJY1 196 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 TCF21O43680 179 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 PPYP01298 95 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 SLC25A42Q86VD7 318 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 LDLRAD3Q86YD5 345 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 OR8B3Q8NGG8 313 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 VSTM2AQ8TAG5 236 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 FAM222BQ8WU58 562 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 OR8B2Q96RD0 313 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 PCED1AQ9H1Q7 454 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 F12P00748 615 aaPredicted RBP10.4□□□□□ -0.74
SCN8A-208ENST00000599343 SNRPCP09234 159 aaKnown RBP10.4□□□□□ -0.74
SCN8A-208ENST00000599343 PSG2P11465 335 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 TMEM92Q6UXU6 159 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 C16orf82Q7Z2V1 217 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 ATG101Q9BSB4 218 aa10.4□□□□□ -0.74
SCN8A-208ENST00000599343 RCC2Q9P258 522 aaKnown RBP10.4□□□□□ -0.74
SCN8A-208ENST00000599343 RGPD1P0DJD0 1748 aa10.4□□□□□ -0.75
SCN8A-208ENST00000599343 MFSD2BA6NFX1 497 aa10.4□□□□□ -0.75
SCN8A-208ENST00000599343 STAG3L2P0CL84 134 aa10.4□□□□□ -0.75
SCN8A-208ENST00000599343 MGAT2Q10469 447 aa10.4□□□□□ -0.75
SCN8A-208ENST00000599343 SSX8Q7RTT4 187 aa10.4□□□□□ -0.75
SCN8A-208ENST00000599343 HMGCLL1Q8TB92 370 aa10.4□□□□□ -0.75
SCN8A-208ENST00000599343 GPBAR1Q8TDU6 330 aa10.4□□□□□ -0.75
SCN8A-208ENST00000599343 CT55Q8WUE5 264 aa10.4□□□□□ -0.75
SCN8A-208ENST00000599343 RAB1CQ92928 201 aa10.4□□□□□ -0.75
SCN8A-208ENST00000599343 AUP1Q9Y679 476 aa10.4□□□□□ -0.75
SCN8A-208ENST00000599343 RCC1P18754 421 aaPredicted RBP10.39□□□□□ -0.75
SCN8A-208ENST00000599343 MPLP40238 635 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 MAGEA5P43359 124 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 NMUP48645 174 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 PRNTQ86SH4 94 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 TP53RKQ96S44 253 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 UBTD1Q9HAC8 227 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 A0A1W2PPE3 182 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 B4DEV8 164 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 RAB29O14966 203 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 LBHQ53QV2 105 aaPredicted RBP10.39□□□□□ -0.75
SCN8A-208ENST00000599343 OR8I2Q8N0Y5 310 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 TMUB1Q9BVT8 246 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 RABAC1Q9UI14 185 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 PDE6DO43924 150 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 CD3EP07766 207 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 COMPP49747 757 aaPredicted RBP10.39□□□□□ -0.75
SCN8A-208ENST00000599343 CADM4Q8NFZ8 388 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 PERPQ96FX8 193 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 AKIRIN1Q9H9L7 192 aaPredicted RBP10.39□□□□□ -0.75
SCN8A-208ENST00000599343 CLN8Q9UBY8 286 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 GABRA6Q16445 453 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 KHDC3LQ587J8 217 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 WDR34Q96EX3 536 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 HDHD3Q9BSH5 251 aaPredicted RBP10.39□□□□□ -0.75
SCN8A-208ENST00000599343 ZNF552Q9H707 407 aaPredicted RBP10.39□□□□□ -0.75
SCN8A-208ENST00000599343 LIPT2A6NK58 231 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 TMEM50BP56557 158 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 SURF2Q15527 256 aaPredicted RBP10.39□□□□□ -0.75
SCN8A-208ENST00000599343 Q8WTZ3 238 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 EID2BQ96D98 161 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 OPN4Q9UHM6 478 aa10.39□□□□□ -0.75
SCN8A-208ENST00000599343 H7C2G1 150 aa10.38□□□□□ -0.75
SCN8A-208ENST00000599343 M0QZK8 103 aa10.38□□□□□ -0.75
SCN8A-208ENST00000599343 FFAR1O14842 300 aa10.38□□□□□ -0.75
SCN8A-208ENST00000599343 GGCTO75223 188 aaKnown RBP10.38□□□□□ -0.75
SCN8A-208ENST00000599343 CISD3P0C7P0 127 aa10.38□□□□□ -0.75
SCN8A-208ENST00000599343 UQCRFS1P47985 274 aa10.38□□□□□ -0.75
SCN8A-208ENST00000599343 CLDN18P56856 261 aa10.38□□□□□ -0.75
SCN8A-208ENST00000599343 HIKESHIQ53FT3 197 aa10.38□□□□□ -0.75
SCN8A-208ENST00000599343 OR1N2Q8NGR9 330 aa10.38□□□□□ -0.75
SCN8A-208ENST00000599343 PTP4A1Q93096 173 aa10.38□□□□□ -0.75
SCN8A-208ENST00000599343 SNRNP40Q96DI7 357 aaKnown RBP10.38□□□□□ -0.75
SCN8A-208ENST00000599343 ADAT3Q96EY9 351 aaPredicted RBP10.38□□□□□ -0.75
SCN8A-208ENST00000599343 TRAV8-7A0A075B6U6 113 aa10.38□□□□□ -0.75
SCN8A-208ENST00000599343 HRKO00198 91 aa10.38□□□□□ -0.75
SCN8A-208ENST00000599343 CDK2AP1O14519 115 aa10.38□□□□□ -0.75
SCN8A-208ENST00000599343 CDX4O14627 284 aaPredicted RBP10.38□□□□□ -0.75
SCN8A-208ENST00000599343 CD99P14209 185 aa10.38□□□□□ -0.75
SCN8A-208ENST00000599343 ZIC1Q15915 447 aa10.38□□□□□ -0.75
SCN8A-208ENST00000599343 ECSCRQ19T08 205 aa10.38□□□□□ -0.75
SCN8A-208ENST00000599343 HARBI1Q96MB7 349 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms