RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 PARP16Q8N5Y8 322 aa11.13□□□□□ -0.63
SCAF1-203ENST00000598359 OR13D1Q8NGV5 346 aa11.13□□□□□ -0.63
SCAF1-203ENST00000598359 OR5AK2Q8NH90 309 aa11.13□□□□□ -0.63
SCAF1-203ENST00000598359 TSEN15Q8WW01 171 aaKnown RBP11.13□□□□□ -0.63
SCAF1-203ENST00000598359 RGP1Q92546 391 aaPredicted RBP11.13□□□□□ -0.63
SCAF1-203ENST00000598359 AP3S1Q92572 193 aa11.13□□□□□ -0.63
SCAF1-203ENST00000598359 ING3Q9NXR8 418 aa11.13□□□□□ -0.63
SCAF1-203ENST00000598359 ZNF281Q9Y2X9 895 aa11.13□□□□□ -0.63
SCAF1-203ENST00000598359 hADV38S2A0JD32 116 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 SHISA3A0PJX4 238 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 CTDSP2O14595 271 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 KDM4BO94953 1096 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 TSPAN15O95858 294 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 OR2H2O95918 312 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 HCKP08631 526 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 TNFSF8P32971 234 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 SOX2P48431 317 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 P2RX3P56373 397 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 OXA1LQ15070 435 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 SSX2Q16385 188 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 SPIN3Q5JUX0 258 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 PRAMEF5Q5TYX0 476 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 ZNF626Q68DY1 528 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 TRAPPC6BQ86SZ2 158 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 TPRA1Q86W33 373 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 TMEM219Q86XT9 240 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 C11orf44Q8N8P7 122 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 PHYHIPQ92561 330 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 CCDC32Q9BV29 185 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 FOXJ3Q9UPW0 622 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 DHDHQ9UQ10 334 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 LINC00312Q9Y6C7 94 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 V9GYH0 126 aa11.12□□□□□ -0.63
SCAF1-203ENST00000598359 FAM172BPA6NC97 362 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 TMEM212A6NML5 194 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 M0QZ24 198 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 SH2D1BO14796 132 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 MGST3O14880 152 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 SULT1B1O43704 296 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 RBP4P02753 201 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 TMEM225BP0DP42 221 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 ZNF44P15621 663 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 GLIPR1P48060 266 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 ZP1P60852 638 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 AESQ08117 197 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 HABP2Q14520 560 aaPredicted RBP11.11□□□□□ -0.63
SCAF1-203ENST00000598359 KISS1Q15726 138 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 SPANXN2Q5MJ10 180 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 CCBE1Q6UXH8 406 aaPredicted RBP11.11□□□□□ -0.63
SCAF1-203ENST00000598359 CENPSQ8N2Z9 138 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 OR11H6Q8NGC7 330 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 OR51A2Q8NGJ7 313 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 COMMD4Q9H0A8 199 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 MIXL1Q9H2W2 232 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 SEBOXQ9HB31 216 aaPredicted RBP11.11□□□□□ -0.63
SCAF1-203ENST00000598359 GLS2Q9UI32 602 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 HILPDAQ9Y5L2 63 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 SESN1Q9Y6P5 492 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 DSCAML1Q8TD84 2053 aa11.11□□□□□ -0.63
SCAF1-203ENST00000598359 NBEAL2Q6ZNJ1 2754 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 IGHV2-26A0A0B4J1V2 119 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 TRAV1-2A0A0B4J238 106 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 HSPB6O14558 160 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 TIMM23O14925 209 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 GDNFP39905 211 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 EFNB2P52799 333 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 RPS11P62280 158 aaKnown RBP eCLIP11.1□□□□□ -0.63
SCAF1-203ENST00000598359 PPP3R1P63098 170 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 MXD1Q05195 221 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 ATXN7L3Q14CW9 347 aaPredicted RBP11.1□□□□□ -0.63
SCAF1-203ENST00000598359 AANATQ16613 207 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 DDI2Q5TDH0 399 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 Q6P435 159 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 UNQ9370/PRO34162Q6UXP9 181 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 LYSMD2Q8IV50 215 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 SERPINA12Q8IW75 414 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 OR5D14Q8NGL3 314 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 OR4C13Q8NGP0 309 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 ACOT12Q8WYK0 555 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 GHSRQ92847 366 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 KCTD12Q96CX2 325 aaKnown RBP11.1□□□□□ -0.63
SCAF1-203ENST00000598359 ORAI1Q96D31 301 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 SDHCQ99643 169 aaPredicted RBP11.1□□□□□ -0.63
SCAF1-203ENST00000598359 TMEM133Q9H2Q1 129 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 TAS2R4Q9NYW5 299 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 FBLN5Q9UBX5 448 aa11.1□□□□□ -0.63
SCAF1-203ENST00000598359 TBL2Q9Y4P3 447 aaKnown RBP11.1□□□□□ -0.63
SCAF1-203ENST00000598359 WNK1Q9H4A3 2382 aa11.09□□□□□ -0.63
SCAF1-203ENST00000598359 SLC33A1O00400 549 aaPredicted RBP11.09□□□□□ -0.63
SCAF1-203ENST00000598359 UCHL1P09936 223 aa11.09□□□□□ -0.63
SCAF1-203ENST00000598359 PTBP1P26599 531 aaKnown RBP eCLIP11.09□□□□□ -0.63
SCAF1-203ENST00000598359 CALRP27797 417 aaKnown RBP11.09□□□□□ -0.63
SCAF1-203ENST00000598359 INSL4Q14641 139 aa11.09□□□□□ -0.63
SCAF1-203ENST00000598359 ACSM3Q53FZ2 586 aa11.09□□□□□ -0.63
SCAF1-203ENST00000598359 UTF1Q5T230 341 aa11.09□□□□□ -0.63
SCAF1-203ENST00000598359 LAX1Q8IWV1 398 aa11.09□□□□□ -0.63
SCAF1-203ENST00000598359 SAXO1Q8IYX7 474 aa11.09□□□□□ -0.63
SCAF1-203ENST00000598359 KLHDC1Q8N7A1 406 aa11.09□□□□□ -0.63
SCAF1-203ENST00000598359 OR13C5Q8NGS8 318 aa11.09□□□□□ -0.63
SCAF1-203ENST00000598359 OR10K1Q8NGX5 313 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms