RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 ZNF69Q9UC07 566 aa16.64■□□□□ 0.25
PNKP-211ENST00000598020 MEIKINA0A087WXM9 373 aa16.63■□□□□ 0.25
PNKP-211ENST00000598020 TMEM30CPA0ZSE6 113 aa16.63■□□□□ 0.25
PNKP-211ENST00000598020 GABARAPO95166 117 aa16.63■□□□□ 0.25
PNKP-211ENST00000598020 IFNA2P01563 188 aa16.63■□□□□ 0.25
PNKP-211ENST00000598020 IL1AP01583 271 aa16.63■□□□□ 0.25
PNKP-211ENST00000598020 TGFBR1P36897 503 aa16.63■□□□□ 0.25
PNKP-211ENST00000598020 UBE2E1P51965 193 aa16.63■□□□□ 0.25
PNKP-211ENST00000598020 SCAND1P57086 179 aa16.63■□□□□ 0.25
PNKP-211ENST00000598020 ERVFRD-1P60508 538 aa16.63■□□□□ 0.25
PNKP-211ENST00000598020 LSM3P62310 102 aaKnown RBP16.63■□□□□ 0.25
PNKP-211ENST00000598020 HCP5Q6MZN7 132 aa16.63■□□□□ 0.25
PNKP-211ENST00000598020 BRICD5Q6PL45 260 aa16.63■□□□□ 0.25
PNKP-211ENST00000598020 TRAPPC6BQ86SZ2 158 aa16.63■□□□□ 0.25
PNKP-211ENST00000598020 CROCCP3Q8IVE0 287 aa16.63■□□□□ 0.25
PNKP-211ENST00000598020 NEK7Q8TDX7 302 aa16.63■□□□□ 0.25
PNKP-211ENST00000598020 HEXA-AS1Q9H8Q6 139 aa16.63■□□□□ 0.25
PNKP-211ENST00000598020 LINC00574Q9H8X3 128 aa16.63■□□□□ 0.25
PNKP-211ENST00000598020 DAPK2Q9UIK4 370 aa16.63■□□□□ 0.25
PNKP-211ENST00000598020 HSF4Q9ULV5 492 aa16.63■□□□□ 0.25
PNKP-211ENST00000598020 IGHV3OR16-10A0A075B7F0 116 aa16.62■□□□□ 0.25
PNKP-211ENST00000598020 ZNF729A6NN14 1252 aaPredicted RBP16.62■□□□□ 0.25
PNKP-211ENST00000598020 MT-ND4P03905 459 aa16.62■□□□□ 0.25
PNKP-211ENST00000598020 IGHV1-8P0DP01 117 aa16.62■□□□□ 0.25
PNKP-211ENST00000598020 BLVRBP30043 206 aaPredicted RBP16.62■□□□□ 0.25
PNKP-211ENST00000598020 RPS19P39019 145 aaKnown RBP16.62■□□□□ 0.25
PNKP-211ENST00000598020 CTF1Q16619 201 aa16.62■□□□□ 0.25
PNKP-211ENST00000598020 HEPN1Q6WQI6 88 aa16.62■□□□□ 0.25
PNKP-211ENST00000598020 OR56B1Q8NGI3 324 aa16.62■□□□□ 0.25
PNKP-211ENST00000598020 MS4A7Q9GZW8 240 aaPredicted RBP16.62■□□□□ 0.25
PNKP-211ENST00000598020 ING3Q9NXR8 418 aa16.62■□□□□ 0.25
PNKP-211ENST00000598020 ETAA1Q9NY74 926 aa16.62■□□□□ 0.25
PNKP-211ENST00000598020 A0A0B4J203 849 aa16.61■□□□□ 0.25
PNKP-211ENST00000598020 KBTBD11-OT1A0A1B0GTJ5 212 aa16.61■□□□□ 0.25
PNKP-211ENST00000598020 MEX3AA1L020 520 aaKnown RBP16.61■□□□□ 0.25
PNKP-211ENST00000598020 SOCS1O15524 211 aa16.61■□□□□ 0.25
PNKP-211ENST00000598020 CLPXO76031 633 aa16.61■□□□□ 0.25
PNKP-211ENST00000598020 GZMHP20718 246 aa16.61■□□□□ 0.25
PNKP-211ENST00000598020 TMEM50BP56557 158 aa16.61■□□□□ 0.25
PNKP-211ENST00000598020 PLA2G7Q13093 441 aa16.61■□□□□ 0.25
PNKP-211ENST00000598020 OR13A1Q8NGR1 328 aa16.61■□□□□ 0.25
PNKP-211ENST00000598020 SULT4A1Q9BR01 284 aa16.61■□□□□ 0.25
PNKP-211ENST00000598020 SESN1Q9Y6P5 492 aa16.61■□□□□ 0.25
PNKP-211ENST00000598020 VEGFCP49767 419 aa16.6■□□□□ 0.25
PNKP-211ENST00000598020 EFNB2P52799 333 aa16.6■□□□□ 0.25
PNKP-211ENST00000598020 DLX1P56177 255 aa16.6■□□□□ 0.25
PNKP-211ENST00000598020 VBP1P61758 197 aa16.6■□□□□ 0.25
PNKP-211ENST00000598020 NCS1P62166 190 aa16.6■□□□□ 0.25
PNKP-211ENST00000598020 C17orf58Q2M2W7 97 aa16.6■□□□□ 0.25
PNKP-211ENST00000598020 NKAPLQ5M9Q1 402 aa16.6■□□□□ 0.25
PNKP-211ENST00000598020 GPR107Q5VW38 600 aa16.6■□□□□ 0.25
PNKP-211ENST00000598020 BRD3OSQ6XYD6 125 aa16.6■□□□□ 0.25
PNKP-211ENST00000598020 USP43Q70EL4 1123 aa16.6■□□□□ 0.25
PNKP-211ENST00000598020 C6orf201Q7Z4U5 140 aa16.6■□□□□ 0.25
PNKP-211ENST00000598020 BCL6BQ8N143 479 aaPredicted RBP16.6■□□□□ 0.25
PNKP-211ENST00000598020 NAA50Q9GZZ1 169 aaKnown RBP16.6■□□□□ 0.25
PNKP-211ENST00000598020 PRDM13Q9H4Q3 707 aa16.6■□□□□ 0.25
PNKP-211ENST00000598020 PLEKHJ1Q9NW61 149 aa16.6■□□□□ 0.25
PNKP-211ENST00000598020 SCOCQ9UIL1 159 aa16.6■□□□□ 0.25
PNKP-211ENST00000598020 A0A0A6YYJ9 748 aa16.59■□□□□ 0.25
PNKP-211ENST00000598020 UBE2QL1A1L167 161 aa16.59■□□□□ 0.25
PNKP-211ENST00000598020 METTL21EPA6NDL7 271 aa16.59■□□□□ 0.25
PNKP-211ENST00000598020 NPIPB11E5RHQ5 1161 aa16.59■□□□□ 0.25
PNKP-211ENST00000598020 GLP1RP43220 463 aa16.59■□□□□ 0.25
PNKP-211ENST00000598020 KLRD1Q13241 179 aa16.59■□□□□ 0.25
PNKP-211ENST00000598020 PRIMA1Q86XR5 153 aa16.59■□□□□ 0.25
PNKP-211ENST00000598020 PIP4P2Q8N4L2 257 aa16.59■□□□□ 0.25
PNKP-211ENST00000598020 OR10A7Q8NGE5 316 aa16.59■□□□□ 0.25
PNKP-211ENST00000598020 OR13D1Q8NGV5 346 aa16.59■□□□□ 0.25
PNKP-211ENST00000598020 DYRK2Q92630 601 aa16.59■□□□□ 0.25
PNKP-211ENST00000598020 FAAP24Q9BTP7 215 aa16.59■□□□□ 0.25
PNKP-211ENST00000598020 SUCNR1Q9BXA5 334 aa16.59■□□□□ 0.25
PNKP-211ENST00000598020 CALYQ9NYX4 217 aa16.59■□□□□ 0.25
PNKP-211ENST00000598020 ABRACLQ9P1F3 81 aa16.59■□□□□ 0.25
PNKP-211ENST00000598020 ETV7Q9Y603 341 aa16.59■□□□□ 0.25
PNKP-211ENST00000598020 RAB27BO00194 218 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 NPFFO15130 113 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 ORC5O43913 435 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 MMP23AO75900 390 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 SNRPBP14678 240 aaKnown RBP16.58■□□□□ 0.24
PNKP-211ENST00000598020 CDK2P24941 298 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 SERPINB10P48595 397 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 PRB3Q04118 309 aaPredicted RBP16.58■□□□□ 0.24
PNKP-211ENST00000598020 MIDNQ504T8 468 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 IDNKQ5T6J7 187 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 RUSC1-AS1Q66K80 236 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 OR52W1Q6IF63 320 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 ZNF782Q6ZMW2 699 aaPredicted RBP16.58■□□□□ 0.24
PNKP-211ENST00000598020 Q6ZTK2 550 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 ZNF554Q86TJ5 538 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 PDZD9Q8IXQ8 264 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 OR11H6Q8NGC7 330 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 LGALS14Q8TCE9 139 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 MRGPRDQ8TDS7 321 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 ZNF418Q8TF45 676 aaPredicted RBP16.58■□□□□ 0.24
PNKP-211ENST00000598020 C22orf15Q8WYQ4 148 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 SLC25A46Q96AG3 418 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 SLC6A7Q99884 636 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 BCL7BQ9BQE9 202 aa16.58■□□□□ 0.24
PNKP-211ENST00000598020 TMEM133Q9H2Q1 129 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms