RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 TMEM212A6NML5 194 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 SERPINE3A8MV23 424 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 NUDT19A8MXV4 375 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 NPIPB11E5RHQ5 1161 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 H3BNX3 289 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 DYNC1I1O14576 645 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 IGKV1D-33P01593 117 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 IGKV1-33P01594 117 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 GABRB1P18505 474 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 C21orf33P30042 268 aaPredicted RBP8.32□□□□□ -1.08
LSM4-205ENST00000597776 REG1BP48304 166 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 SOX2P48431 317 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 THBS3P49746 956 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 ELP2Q6IA86 826 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 THNSL2Q86YJ6 484 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 SYS1Q8N2H4 156 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 CBR4Q8N4T8 237 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 PXT1Q8NFP0 134 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 OR51D1Q8NGF3 324 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 OR10X1Q8NGY0 326 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 OR5AK2Q8NH90 309 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 RGP1Q92546 391 aaPredicted RBP8.32□□□□□ -1.08
LSM4-205ENST00000597776 MRPL48Q96GC5 212 aaKnown RBP8.32□□□□□ -1.08
LSM4-205ENST00000597776 DUX3Q96PT4 197 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 GPER1Q99527 375 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 LINC00574Q9H8X3 128 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 ERVK13-1Q9NX77 482 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 TAS2R4Q9NYW5 299 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 GMPPBQ9Y5P6 360 aa8.32□□□□□ -1.08
LSM4-205ENST00000597776 IGHV3-72A0A0B4J1Y9 119 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 LINC01548A6NM66 108 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 SNTNA6NMZ2 147 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 ATP5HO75947 161 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 CDRT1O95170 752 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 HTR3BO95264 441 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 RAB3AP20336 220 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 RAB7AP51149 207 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 ALDH3A2P51648 485 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 GTF2A1P52655 376 aaPredicted RBP8.31□□□□□ -1.08
LSM4-205ENST00000597776 GBX2P52951 348 aaPredicted RBP8.31□□□□□ -1.08
LSM4-205ENST00000597776 CD69Q07108 199 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 IL13RA2Q14627 380 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 RSU1Q15404 277 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 FAM53AQ6NSI3 398 aaPredicted RBP8.31□□□□□ -1.08
LSM4-205ENST00000597776 ZNF529Q6P280 563 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 SLC35E3Q7Z769 313 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 OR8H3Q8N146 312 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 SUMF2Q8NBJ7 301 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 KLHL30-AS1Q8NEE0 82 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 OR52I1Q8NGK6 324 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 UBALD1Q8TB05 177 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 HAVCR2Q8TDQ0 301 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 CHPT1Q8WUD6 406 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 DPF1Q92782 380 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 RBMXL1Q96E39 390 aaKnown RBP8.31□□□□□ -1.08
LSM4-205ENST00000597776 DPCDQ9BVM2 203 aaPredicted RBP8.31□□□□□ -1.08
LSM4-205ENST00000597776 BARHL1Q9BZE3 327 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 NCOR1P1Q9H4R4 102 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 RYR3Q15413 4870 aa8.31□□□□□ -1.08
LSM4-205ENST00000597776 HSD17B6O14756 317 aa8.3□□□□□ -1.08
LSM4-205ENST00000597776 MAGEB3O15480 346 aa8.3□□□□□ -1.08
LSM4-205ENST00000597776 FGF16O43320 207 aa8.3□□□□□ -1.08
LSM4-205ENST00000597776 FADS2O95864 444 aaKnown RBP8.3□□□□□ -1.08
LSM4-205ENST00000597776 RPSAP08865 295 aaKnown RBP8.3□□□□□ -1.08
LSM4-205ENST00000597776 VSIG8P0DPA2 414 aa8.3□□□□□ -1.08
LSM4-205ENST00000597776 PAX5Q02548 391 aa8.3□□□□□ -1.08
LSM4-205ENST00000597776 XAF1Q6GPH4 301 aa8.3□□□□□ -1.08
LSM4-205ENST00000597776 LCNL1Q6ZST4 164 aa8.3□□□□□ -1.08
LSM4-205ENST00000597776 MOB3BQ86TA1 216 aa8.3□□□□□ -1.08
LSM4-205ENST00000597776 RHOXF1Q8NHV9 184 aa8.3□□□□□ -1.08
LSM4-205ENST00000597776 CPNE2Q96FN4 548 aaPredicted RBP8.3□□□□□ -1.08
LSM4-205ENST00000597776 P2RX4Q99571 388 aa8.3□□□□□ -1.08
LSM4-205ENST00000597776 JAM3Q9BX67 310 aa8.3□□□□□ -1.08
LSM4-205ENST00000597776 GPR61Q9BZJ8 451 aa8.3□□□□□ -1.08
LSM4-205ENST00000597776 ST3GAL6Q9Y274 331 aa8.3□□□□□ -1.08
LSM4-205ENST00000597776 TENM3Q9P273 2699 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 IGHV1-3A0A0C4DH29 117 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 CCRL2O00421 344 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 GEMIN2O14893 280 aaKnown RBP8.29□□□□□ -1.08
LSM4-205ENST00000597776 OR7C1O76099 320 aaPredicted RBP8.29□□□□□ -1.08
LSM4-205ENST00000597776 IGHG2P01859 326 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 LIMS3P0CW19 117 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 LIMS4P0CW20 117 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 KCNJ3P48549 501 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 RBM11P57052 281 aaKnown RBP8.29□□□□□ -1.08
LSM4-205ENST00000597776 RAB25P57735 213 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 ZNF816Q0VGE8 651 aaPredicted RBP8.29□□□□□ -1.08
LSM4-205ENST00000597776 RAB40BQ12829 278 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 MRPL28Q13084 256 aaKnown RBP8.29□□□□□ -1.08
LSM4-205ENST00000597776 DEFB136Q30KP8 78 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 ASCL4Q6XD76 172 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 FOXRED2Q8IWF2 684 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 STPG2Q8N412 459 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 Q8NFD4 153 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 CCDC107Q8WV48 283 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 APH1BQ8WW43 257 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 ORAI1Q96D31 301 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 RAX2Q96IS3 184 aa8.29□□□□□ -1.08
LSM4-205ENST00000597776 EAF1Q96JC9 268 aaPredicted RBP8.29□□□□□ -1.08
LSM4-205ENST00000597776 MYCBPQ99417 103 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms