RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 TBL2Q9Y4P3 447 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-212ENST00000596163 TRAV1-2A0A0B4J238 106 aa14.07□□□□□ -0.16
SHKBP1-212ENST00000596163 KBTBD11-OT1A0A1B0GTJ5 212 aa14.07□□□□□ -0.16
SHKBP1-212ENST00000596163 TMEM89A2RUT3 159 aa14.07□□□□□ -0.16
SHKBP1-212ENST00000596163 MPIG6BO95866 241 aa14.07□□□□□ -0.16
SHKBP1-212ENST00000596163 GZMHP20718 246 aa14.07□□□□□ -0.16
SHKBP1-212ENST00000596163 FUT3P21217 361 aa14.07□□□□□ -0.16
SHKBP1-212ENST00000596163 CDK2P24941 298 aa14.07□□□□□ -0.16
SHKBP1-212ENST00000596163 DYNC1I2Q13409 638 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-212ENST00000596163 RAB12Q6IQ22 244 aa14.07□□□□□ -0.16
SHKBP1-212ENST00000596163 TMEM104Q8NE00 496 aa14.07□□□□□ -0.16
SHKBP1-212ENST00000596163 OR5R1Q8NH85 324 aa14.07□□□□□ -0.16
SHKBP1-212ENST00000596163 PLPPR1Q8TBJ4 325 aa14.07□□□□□ -0.16
SHKBP1-212ENST00000596163 Q96M66 194 aa14.07□□□□□ -0.16
SHKBP1-212ENST00000596163 MEGF9Q9H1U4 602 aa14.07□□□□□ -0.16
SHKBP1-212ENST00000596163 RAB9BQ9NP90 201 aa14.07□□□□□ -0.16
SHKBP1-212ENST00000596163 TNFRSF19Q9NS68 423 aa14.07□□□□□ -0.16
SHKBP1-212ENST00000596163 RCC2Q9P258 522 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-212ENST00000596163 PEX16Q9Y5Y5 336 aa14.07□□□□□ -0.16
SHKBP1-212ENST00000596163 V9GY05 133 aa14.07□□□□□ -0.16
SHKBP1-212ENST00000596163 SLC17A2O00624 439 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 CA11O75493 328 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 TNFAIP8O95379 198 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 HKR1P10072 659 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 ARSBP15848 533 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 GLP1RP43220 463 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 RPL15P61313 204 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 FOXL1Q12952 345 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 RAB11BQ15907 218 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 AANATQ16613 207 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 MINOS1Q5TGZ0 78 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 ZNF626Q68DY1 528 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 C12orf54Q6X4T0 127 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 OR2W3Q7Z3T1 314 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 OR10A7Q8NGE5 316 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 FAM46BQ96A09 425 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 MALSU1Q96EH3 234 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 NEDD4LQ96PU5 975 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 CLEC7AQ9BXN2 247 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 TMEM59Q9BXS4 323 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 VCX3AQ9NNX9 186 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 MINOS1-NBL1R4GNA1 71 aa14.06□□□□□ -0.16
SHKBP1-212ENST00000596163 IGHV2-26A0A0B4J1V2 119 aa14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 ODF3BA8MYP8 253 aa14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 TOR1AO14656 332 aa14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 IGHV4-59P01825 116 aa14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 VSIG8P0DPA2 414 aa14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 PRRX1P54821 245 aa14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 RPS27AP62979 156 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 SYT6Q5T7P8 510 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 PRAMEF5Q5TYX0 476 aa14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 GDPGP1Q6ZNW5 385 aa14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 ABHD12Q8N2K0 398 aa14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 OR13A1Q8NGR1 328 aa14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 ZNF596Q8TC21 504 aa14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 DYRK2Q92630 601 aa14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 URM1Q9BTM9 101 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 CHIAQ9BZP6 476 aa14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 ETAA1Q9NY74 926 aa14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 CALYQ9NYX4 217 aa14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 STUB1Q9UNE7 303 aa14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 SSR3Q9UNL2 185 aa14.05□□□□□ -0.16
SHKBP1-212ENST00000596163 A0A087WXM4 84 aa14.04□□□□□ -0.16
SHKBP1-212ENST00000596163 PDCD6O75340 191 aa14.04□□□□□ -0.16
SHKBP1-212ENST00000596163 IL1AP01583 271 aa14.04□□□□□ -0.16
SHKBP1-212ENST00000596163 MT-ND4P03905 459 aa14.04□□□□□ -0.16
SHKBP1-212ENST00000596163 CGB3P0DN86 165 aa14.04□□□□□ -0.16
SHKBP1-212ENST00000596163 CGB7P0DN87 165 aa14.04□□□□□ -0.16
SHKBP1-212ENST00000596163 FGF9P31371 208 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-212ENST00000596163 COMPP49747 757 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-212ENST00000596163 C17orf58Q2M2W7 97 aa14.04□□□□□ -0.16
SHKBP1-212ENST00000596163 BRICD5Q6PL45 260 aa14.04□□□□□ -0.16
SHKBP1-212ENST00000596163 ZNF497Q6ZNH5 498 aa14.04□□□□□ -0.16
SHKBP1-212ENST00000596163 MRGPRDQ8TDS7 321 aa14.04□□□□□ -0.16
SHKBP1-212ENST00000596163 CREB3L1Q96BA8 519 aa14.04□□□□□ -0.16
SHKBP1-212ENST00000596163 SSX3Q99909 188 aa14.04□□□□□ -0.16
SHKBP1-212ENST00000596163 LINC00574Q9H8X3 128 aa14.04□□□□□ -0.16
SHKBP1-212ENST00000596163 IDI2-AS1Q9NZ38 188 aa14.04□□□□□ -0.16
SHKBP1-212ENST00000596163 ZNF581Q9P0T4 197 aa14.04□□□□□ -0.16
SHKBP1-212ENST00000596163 FAM181BA6NEQ2 426 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 TMEM14DPA8MWL7 114 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 AIPO00170 330 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 MMP23AO75900 390 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 RAB3BP20337 219 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 OMGP23515 440 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 HTR1DP28221 377 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 CD34P28906 385 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 P2RY14Q15391 338 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 NEDD8Q15843 81 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 LRRC75BQ2VPJ9 315 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 C22orf42Q6IC83 251 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 OR10K2Q6IF99 312 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 TRAT1Q6PIZ9 186 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 SLC16A12Q6ZSM3 486 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 TSPAN14Q8NG11 270 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 NDNFQ8TB73 568 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 GFI1Q99684 422 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 TM2D1Q9BX74 207 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 STEAP1Q9UHE8 339 aa14.03□□□□□ -0.16
SHKBP1-212ENST00000596163 VPREB3Q9UKI3 123 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms