RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 C1orf100Q5SVJ3 147 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 AWAT2Q6E213 333 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 SIGIRRQ6IA17 410 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 OR4P4Q8NGL7 312 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 OR5R1Q8NH85 324 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 FOXRED1Q96CU9 486 aaPredicted RBP8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 KIRREL1Q96J84 757 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 Q96M66 194 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 ZNF747Q9BV97 191 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 CLEC7AQ9BXN2 247 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 KCNK15Q9H427 330 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 BANF2Q9H503 90 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 LINC00574Q9H8X3 128 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 ZNF286AQ9HBT8 521 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 TCF7L1Q9HCS4 588 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 CALYQ9NYX4 217 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 BLOC1S6Q9UL45 172 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 MEIKINA0A087WXM9 373 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 HAX1O00165 279 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 CHST1O43916 411 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 IGLV1-47P01700 117 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 CRYBA1P05813 215 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 GABRA5P31644 462 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 SSTR5P35346 364 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 GLP1RP43220 463 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 RAB13P51153 203 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 LGALS4P56470 323 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 DYNC1I2Q13409 638 aaKnown RBP8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 SSX2Q16385 188 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 LY6EQ16553 131 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 PLA1AQ53H76 456 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 ATAD3CQ5T2N8 411 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 SLC35E4Q6ICL7 350 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 GDPGP1Q6ZNW5 385 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 Q6ZSV7 163 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 ZNF367Q7RTV3 350 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 ABHD12Q8N2K0 398 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 LINC01006Q8NI28 216 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 MRGPRDQ8TDS7 321 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 FAM46BQ96A09 425 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 MALSU1Q96EH3 234 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 MRPS24Q96EL2 167 aaKnown RBP8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 BARHL1Q9BZE3 327 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 OR6C3Q9NZP0 311 aa8.87□□□□□ -0.99
SHKBP1-206ENST00000595523 NOTCH1P46531 2555 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 BTBD17A6NE02 478 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 NPIPB11E5RHQ5 1161 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 SLC22A1O15245 554 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 CRTAPO75718 401 aaPredicted RBP8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 IL1AP01583 271 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 VSIG8P0DPA2 414 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 KRTAP10-3P60369 221 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 QRFPP83859 136 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 SRSF4Q08170 494 aaKnown RBP8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 UNC119Q13432 240 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 TRAM1Q15629 374 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 MINOS1Q5TGZ0 78 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 DHRS7BQ6IAN0 325 aaPredicted RBP8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 OR52W1Q6IF63 320 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 OR10K2Q6IF99 312 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 CCBE1Q6UXH8 406 aaPredicted RBP8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 ZNF497Q6ZNH5 498 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 SPARTQ8N0X7 666 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 OR4F5Q8NH21 305 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 WFDC12Q8WWY7 111 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 SELENOIQ9C0D9 397 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 PCDHB16Q9NRJ7 776 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 NDUFB11Q9NX14 153 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 HILPDAQ9Y5L2 63 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 MINOS1-NBL1R4GNA1 71 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 MEGF8Q7Z7M0 2845 aa8.86□□□□□ -0.99
SHKBP1-206ENST00000595523 SHISA3A0PJX4 238 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 TMEM30CPA0ZSE6 113 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 CLPSL1A2RUU4 121 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 FAM90A10PA6NDY2 464 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 FAM90A18PA6NE21 464 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 FAM90A16PA6NEW6 464 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 FAM90A20PA6NIJ5 464 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 FAM90A7PA6NKC0 464 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 POM121CA8CG34 1229 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 FAM90A22PA8MWA6 464 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 FAM90A12PA8MX19 464 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 FAM90A5PA8MXJ8 464 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 FAM90A23PA8MXZ1 464 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 C15orf65H3BRN8 121 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 MRPS14O60783 128 aaKnown RBP8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 TSPAN9O75954 239 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 MT-ND4P03905 459 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 FAM90A15PP0C7V4 464 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 FAM90A13PP0C7W8 464 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 FAM90A14PP0C7W9 464 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 FAM90A24PP0C7X0 464 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 NFYBP25208 207 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 PSMA1P25786 263 aaKnown RBP8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 CALRP27797 417 aaKnown RBP8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 HTR1DP28221 377 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 HTR2CP28335 458 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 FAM189A2Q15884 450 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 HLA-DRB5Q30154 266 aa8.85□□□□□ -0.99
SHKBP1-206ENST00000595523 FBLN7Q53RD9 439 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms