RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-205	ENST00000595081	PAX5	Q02548	391 aa		18.72	■□□□□ 0.59
PNKP-205	ENST00000595081	NCR3LG1	Q68D85	454 aa		18.72	■□□□□ 0.59
PNKP-205	ENST00000595081	SLC35E4	Q6ICL7	350 aa		18.72	■□□□□ 0.59
PNKP-205	ENST00000595081	HCP5	Q6MZN7	132 aa		18.72	■□□□□ 0.59
PNKP-205	ENST00000595081	SFXN4	Q6P4A7	337 aa		18.72	■□□□□ 0.59
PNKP-205	ENST00000595081	OR13A1	Q8NGR1	328 aa		18.72	■□□□□ 0.59
PNKP-205	ENST00000595081	CORO2A	Q92828	525 aa		18.72	■□□□□ 0.59
PNKP-205	ENST00000595081	URM1	Q9BTM9	101 aa	Known RBP	18.72	■□□□□ 0.59
PNKP-205	ENST00000595081	OR6C3	Q9NZP0	311 aa		18.72	■□□□□ 0.59
PNKP-205	ENST00000595081	TMEM30CP	A0ZSE6	113 aa		18.71	■□□□□ 0.59
PNKP-205	ENST00000595081	UBE2QL1	A1L167	161 aa		18.71	■□□□□ 0.59
PNKP-205	ENST00000595081	MMP23A	O75900	390 aa		18.71	■□□□□ 0.59
PNKP-205	ENST00000595081	IFNA2	P01563	188 aa		18.71	■□□□□ 0.59
PNKP-205	ENST00000595081	COX7A1	P24310	79 aa		18.71	■□□□□ 0.59
PNKP-205	ENST00000595081	CHAT	P28329	748 aa		18.71	■□□□□ 0.59
PNKP-205	ENST00000595081	RANBP1	P43487	201 aa		18.71	■□□□□ 0.59
PNKP-205	ENST00000595081	EFNB2	P52799	333 aa		18.71	■□□□□ 0.59
PNKP-205	ENST00000595081	RBM39	Q14498	530 aa	Known RBP	18.71	■□□□□ 0.59
PNKP-205	ENST00000595081	ZNF497	Q6ZNH5	498 aa		18.71	■□□□□ 0.59
PNKP-205	ENST00000595081	NEDD4L	Q96PU5	975 aa		18.71	■□□□□ 0.59
PNKP-205	ENST00000595081	NAA50	Q9GZZ1	169 aa	Known RBP	18.71	■□□□□ 0.59
PNKP-205	ENST00000595081	ETAA1	Q9NY74	926 aa		18.71	■□□□□ 0.59
PNKP-205	ENST00000595081	KIAA2026	Q5HYC2	2103 aa		18.71	■□□□□ 0.59
PNKP-205	ENST00000595081	SOCS1	O15524	211 aa		18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	CLPX	O76031	633 aa		18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	RBP4	P02753	201 aa		18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	IGHV1-8	P0DP01	117 aa		18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	BLVRB	P30043	206 aa	Predicted RBP	18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	NCS1	P62166	190 aa		18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	GUCA2A	Q02747	115 aa		18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	PRAMEF5	Q5TYX0	476 aa		18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	SLC16A12	Q6ZSM3	486 aa		18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	C9orf139	Q6ZV77	190 aa		18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	C6orf201	Q7Z4U5	140 aa		18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	PIP4P2	Q8N4L2	257 aa		18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	FAM89B	Q8N5H3	189 aa		18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	MRGPRD	Q8TDS7	321 aa		18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	ZNF48	Q96MX3	618 aa	Predicted RBP	18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	SULT4A1	Q9BR01	284 aa		18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	GAL3ST2	Q9H3Q3	398 aa		18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	NCOR1P1	Q9H4R4	102 aa		18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	TAS2R3	Q9NYW6	316 aa		18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	RAB22A	Q9UL26	194 aa		18.7	■□□□□ 0.58
PNKP-205	ENST00000595081	MDFIC2	A0A1B0GVS7	189 aa		18.69	■□□□□ 0.58
PNKP-205	ENST00000595081	MT-ND4	P03905	459 aa		18.69	■□□□□ 0.58
PNKP-205	ENST00000595081	SNRPB	P14678	240 aa	Known RBP	18.69	■□□□□ 0.58
PNKP-205	ENST00000595081	OMG	P23515	440 aa		18.69	■□□□□ 0.58
PNKP-205	ENST00000595081	GDNF	P39905	211 aa		18.69	■□□□□ 0.58
PNKP-205	ENST00000595081	VEGFC	P49767	419 aa		18.69	■□□□□ 0.58
PNKP-205	ENST00000595081	VBP1	P61758	197 aa		18.69	■□□□□ 0.58
PNKP-205	ENST00000595081	SRSF2	Q01130	221 aa	Known RBP	18.69	■□□□□ 0.58
PNKP-205	ENST00000595081	C17orf58	Q2M2W7	97 aa		18.69	■□□□□ 0.58
PNKP-205	ENST00000595081	GPR107	Q5VW38	600 aa		18.69	■□□□□ 0.58
PNKP-205	ENST00000595081	GPR141	Q7Z602	305 aa		18.69	■□□□□ 0.58
PNKP-205	ENST00000595081	SIGLECL1	Q8N7X8	197 aa		18.69	■□□□□ 0.58
PNKP-205	ENST00000595081	CCDC107	Q8WV48	283 aa		18.69	■□□□□ 0.58
PNKP-205	ENST00000595081	FAAP24	Q9BTP7	215 aa		18.69	■□□□□ 0.58
PNKP-205	ENST00000595081	HEXA-AS1	Q9H8Q6	139 aa		18.69	■□□□□ 0.58
PNKP-205	ENST00000595081		H3BUI4	141 aa		18.68	■□□□□ 0.58
PNKP-205	ENST00000595081	GLA	P06280	429 aa		18.68	■□□□□ 0.58
PNKP-205	ENST00000595081	CDK2	P24941	298 aa		18.68	■□□□□ 0.58
PNKP-205	ENST00000595081	RPS19	P39019	145 aa	Known RBP	18.68	■□□□□ 0.58
PNKP-205	ENST00000595081	UBE2E1	P51965	193 aa		18.68	■□□□□ 0.58
PNKP-205	ENST00000595081	BPIFB3	P59826	476 aa		18.68	■□□□□ 0.58
PNKP-205	ENST00000595081	TUSC1	Q2TAM9	212 aa		18.68	■□□□□ 0.58
PNKP-205	ENST00000595081	IDNK	Q5T6J7	187 aa		18.68	■□□□□ 0.58
PNKP-205	ENST00000595081	BAIAP2L2	Q6UXY1	529 aa		18.68	■□□□□ 0.58
PNKP-205	ENST00000595081	ZNF565	Q8N9K5	539 aa		18.68	■□□□□ 0.58
PNKP-205	ENST00000595081	CALY	Q9NYX4	217 aa		18.68	■□□□□ 0.58
PNKP-205	ENST00000595081	SESN1	Q9Y6P5	492 aa		18.68	■□□□□ 0.58
PNKP-205	ENST00000595081		A0A0U1RQK1	487 aa		18.67	■□□□□ 0.58
PNKP-205	ENST00000595081	KBTBD11-OT1	A0A1B0GTJ5	212 aa		18.67	■□□□□ 0.58
PNKP-205	ENST00000595081	ZNF729	A6NN14	1252 aa	Predicted RBP	18.67	■□□□□ 0.58
PNKP-205	ENST00000595081	FOXI3	A8MTJ6	420 aa	Predicted RBP	18.67	■□□□□ 0.58
PNKP-205	ENST00000595081	NPFF	O15130	113 aa		18.67	■□□□□ 0.58
PNKP-205	ENST00000595081	PAH	P00439	452 aa		18.67	■□□□□ 0.58
PNKP-205	ENST00000595081	CGB3	P0DN86	165 aa		18.67	■□□□□ 0.58
PNKP-205	ENST00000595081	CGB7	P0DN87	165 aa		18.67	■□□□□ 0.58
PNKP-205	ENST00000595081	RAB6A	P20340	208 aa		18.67	■□□□□ 0.58
PNKP-205	ENST00000595081	SSTR5	P35346	364 aa		18.67	■□□□□ 0.58
PNKP-205	ENST00000595081	DEFB112	Q30KQ8	113 aa		18.67	■□□□□ 0.58
PNKP-205	ENST00000595081	ANKRD13B	Q86YJ7	626 aa		18.67	■□□□□ 0.58
PNKP-205	ENST00000595081	OR4K15	Q8NH41	348 aa		18.67	■□□□□ 0.58
PNKP-205	ENST00000595081	LGALS14	Q8TCE9	139 aa		18.67	■□□□□ 0.58
PNKP-205	ENST00000595081	ZNF418	Q8TF45	676 aa	Predicted RBP	18.67	■□□□□ 0.58
PNKP-205	ENST00000595081	SUCNR1	Q9BXA5	334 aa		18.67	■□□□□ 0.58
PNKP-205	ENST00000595081	PLEKHJ1	Q9NW61	149 aa		18.67	■□□□□ 0.58
PNKP-205	ENST00000595081	TCF21	O43680	179 aa		18.66	■□□□□ 0.58
PNKP-205	ENST00000595081	GABARAP	O95166	117 aa		18.66	■□□□□ 0.58
PNKP-205	ENST00000595081	SAA4	P35542	130 aa		18.66	■□□□□ 0.58
PNKP-205	ENST00000595081	SERPINB10	P48595	397 aa		18.66	■□□□□ 0.58
PNKP-205	ENST00000595081	TMEM50B	P56557	158 aa		18.66	■□□□□ 0.58
PNKP-205	ENST00000595081	MOGAT2	Q3SYC2	334 aa		18.66	■□□□□ 0.58
PNKP-205	ENST00000595081	HEPN1	Q6WQI6	88 aa		18.66	■□□□□ 0.58
PNKP-205	ENST00000595081	GAPT	Q8N292	157 aa		18.66	■□□□□ 0.58
PNKP-205	ENST00000595081	OR56B1	Q8NGI3	324 aa		18.66	■□□□□ 0.58
PNKP-205	ENST00000595081	MEIOC	A2RUB1	952 aa		18.65	■□□□□ 0.58
PNKP-205	ENST00000595081	FAM172BP	A6NC97	362 aa		18.65	■□□□□ 0.58
PNKP-205	ENST00000595081	IL1A	P01583	271 aa		18.65	■□□□□ 0.58
PNKP-205	ENST00000595081	CTF1	Q16619	201 aa		18.65	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms