RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 CPNE2Q96FN4 548 aaPredicted RBP15.3■□□□□ 0.04
TRAF4-216ENST00000586813 MYCBPQ99417 103 aaPredicted RBP15.3■□□□□ 0.04
TRAF4-216ENST00000586813 AASSQ9UDR5 926 aa15.3■□□□□ 0.04
TRAF4-216ENST00000586813 DHDHQ9UQ10 334 aa15.3■□□□□ 0.04
TRAF4-216ENST00000586813 SERPINE3A8MV23 424 aa15.29■□□□□ 0.04
TRAF4-216ENST00000586813 NUDT19A8MXV4 375 aa15.29■□□□□ 0.04
TRAF4-216ENST00000586813 GABRPO00591 440 aa15.29■□□□□ 0.04
TRAF4-216ENST00000586813 ATP5HO75947 161 aa15.29■□□□□ 0.04
TRAF4-216ENST00000586813 IGKV1D-33P01593 117 aa15.29■□□□□ 0.04
TRAF4-216ENST00000586813 IGKV1-33P01594 117 aa15.29■□□□□ 0.04
TRAF4-216ENST00000586813 SLC6A1P30531 599 aa15.29■□□□□ 0.04
TRAF4-216ENST00000586813 SSTR5P35346 364 aa15.29■□□□□ 0.04
TRAF4-216ENST00000586813 CD69Q07108 199 aa15.29■□□□□ 0.04
TRAF4-216ENST00000586813 PIGYQ3MUY2 71 aa15.29■□□□□ 0.04
TRAF4-216ENST00000586813 ZIK1Q3SY52 487 aaPredicted RBP15.29■□□□□ 0.04
TRAF4-216ENST00000586813 OR5AK2Q8NH90 309 aa15.29■□□□□ 0.04
TRAF4-216ENST00000586813 RFESDQ8TAC1 157 aa15.29■□□□□ 0.04
TRAF4-216ENST00000586813 PLPPR1Q8TBJ4 325 aa15.29■□□□□ 0.04
TRAF4-216ENST00000586813 TNFAIP8L1Q8WVP5 186 aa15.29■□□□□ 0.04
TRAF4-216ENST00000586813 TSEN15Q8WW01 171 aaKnown RBP15.29■□□□□ 0.04
TRAF4-216ENST00000586813 PYDC1Q8WXC3 89 aa15.29■□□□□ 0.04
TRAF4-216ENST00000586813 B9D2Q9BPU9 175 aa15.29■□□□□ 0.04
TRAF4-216ENST00000586813 PDCD1LG2Q9BQ51 273 aa15.29■□□□□ 0.04
TRAF4-216ENST00000586813 MCRIP2Q9BUT9 160 aaKnown RBP15.29■□□□□ 0.04
TRAF4-216ENST00000586813 ZFP57Q9NU63 452 aa15.29■□□□□ 0.04
TRAF4-216ENST00000586813 E9PI62 339 aa15.28■□□□□ 0.04
TRAF4-216ENST00000586813 CIB2O75838 187 aa15.28■□□□□ 0.04
TRAF4-216ENST00000586813 IGHG2P01859 326 aa15.28■□□□□ 0.04
TRAF4-216ENST00000586813 CCDC159P0C7I6 412 aa15.28■□□□□ 0.04
TRAF4-216ENST00000586813 RAB3AP20336 220 aa15.28■□□□□ 0.04
TRAF4-216ENST00000586813 KCNJ3P48549 501 aa15.28■□□□□ 0.04
TRAF4-216ENST00000586813 HNF4GQ14541 408 aa15.28■□□□□ 0.04
TRAF4-216ENST00000586813 ZNF529Q6P280 563 aa15.28■□□□□ 0.04
TRAF4-216ENST00000586813 SLC35E3Q7Z769 313 aa15.28■□□□□ 0.04
TRAF4-216ENST00000586813 KLHL30-AS1Q8NEE0 82 aa15.28■□□□□ 0.04
TRAF4-216ENST00000586813 OR10A7Q8NGE5 316 aa15.28■□□□□ 0.04
TRAF4-216ENST00000586813 OR51A2Q8NGJ7 313 aa15.28■□□□□ 0.04
TRAF4-216ENST00000586813 OR10X1Q8NGY0 326 aa15.28■□□□□ 0.04
TRAF4-216ENST00000586813 GPER1Q99527 375 aa15.28■□□□□ 0.04
TRAF4-216ENST00000586813 FAM192AQ9GZU8 254 aa15.28■□□□□ 0.04
TRAF4-216ENST00000586813 LINC00527Q9UJ94 153 aa15.28■□□□□ 0.04
TRAF4-216ENST00000586813 HSD17B6O14756 317 aa15.27■□□□□ 0.04
TRAF4-216ENST00000586813 MAGEB3O15480 346 aa15.27■□□□□ 0.04
TRAF4-216ENST00000586813 GABRB1P18505 474 aa15.27■□□□□ 0.04
TRAF4-216ENST00000586813 ALDH3A2P51648 485 aa15.27■□□□□ 0.04
TRAF4-216ENST00000586813 SLC35B1P78383 322 aa15.27■□□□□ 0.04
TRAF4-216ENST00000586813 MRPL28Q13084 256 aaKnown RBP15.27■□□□□ 0.04
TRAF4-216ENST00000586813 RSU1Q15404 277 aa15.27■□□□□ 0.04
TRAF4-216ENST00000586813 SLC16A12Q6ZSM3 486 aa15.27■□□□□ 0.04
TRAF4-216ENST00000586813 SATL1Q86VE3 508 aa15.27■□□□□ 0.04
TRAF4-216ENST00000586813 FOXRED2Q8IWF2 684 aa15.27■□□□□ 0.04
TRAF4-216ENST00000586813 Q8NFD4 153 aa15.27■□□□□ 0.04
TRAF4-216ENST00000586813 OR10K1Q8NGX5 313 aa15.27■□□□□ 0.04
TRAF4-216ENST00000586813 P2RX4Q99571 388 aa15.27■□□□□ 0.04
TRAF4-216ENST00000586813 ERVK13-1Q9NX77 482 aa15.27■□□□□ 0.04
TRAF4-216ENST00000586813 FAM53CQ9NYF3 392 aa15.27■□□□□ 0.04
TRAF4-216ENST00000586813 RYR3Q15413 4870 aa15.26■□□□□ 0.03
TRAF4-216ENST00000586813 TRAV39A0A0B4J263 110 aa15.26■□□□□ 0.03
TRAF4-216ENST00000586813 A0A1W2PPE3 182 aa15.26■□□□□ 0.03
TRAF4-216ENST00000586813 FADS2O95864 444 aaKnown RBP15.26■□□□□ 0.03
TRAF4-216ENST00000586813 MYCNOSP40205 109 aa15.26■□□□□ 0.03
TRAF4-216ENST00000586813 ZNF816Q0VGE8 651 aaPredicted RBP15.26■□□□□ 0.03
TRAF4-216ENST00000586813 STPG2Q8N412 459 aa15.26■□□□□ 0.03
TRAF4-216ENST00000586813 COMMD1Q8N668 190 aa15.26■□□□□ 0.03
TRAF4-216ENST00000586813 DPCDQ9BVM2 203 aaPredicted RBP15.26■□□□□ 0.03
TRAF4-216ENST00000586813 TAS2R4Q9NYW5 299 aa15.26■□□□□ 0.03
TRAF4-216ENST00000586813 ZNF581Q9P0T4 197 aa15.26■□□□□ 0.03
TRAF4-216ENST00000586813 GMPPBQ9Y5P6 360 aa15.26■□□□□ 0.03
TRAF4-216ENST00000586813 GBX2P52951 348 aaPredicted RBP15.25■□□□□ 0.03
TRAF4-216ENST00000586813 DCTN2Q13561 401 aaKnown RBP15.25■□□□□ 0.03
TRAF4-216ENST00000586813 ASCL4Q6XD76 172 aa15.25■□□□□ 0.03
TRAF4-216ENST00000586813 ZNF695Q8IW36 515 aa15.25■□□□□ 0.03
TRAF4-216ENST00000586813 IZUMO1Q8IYV9 350 aa15.25■□□□□ 0.03
TRAF4-216ENST00000586813 SUMF2Q8NBJ7 301 aa15.25■□□□□ 0.03
TRAF4-216ENST00000586813 RGP1Q92546 391 aaPredicted RBP15.25■□□□□ 0.03
TRAF4-216ENST00000586813 JAM3Q9BX67 310 aa15.25■□□□□ 0.03
TRAF4-216ENST00000586813 AMBNQ9NP70 447 aa15.25■□□□□ 0.03
TRAF4-216ENST00000586813 TENM3Q9P273 2699 aa15.25■□□□□ 0.03
TRAF4-216ENST00000586813 IGHV1-3A0A0C4DH29 117 aa15.24■□□□□ 0.03
TRAF4-216ENST00000586813 CCRL2O00421 344 aa15.24■□□□□ 0.03
TRAF4-216ENST00000586813 HTR3BO95264 441 aa15.24■□□□□ 0.03
TRAF4-216ENST00000586813 REG1BP48304 166 aa15.24■□□□□ 0.03
TRAF4-216ENST00000586813 SOX2P48431 317 aa15.24■□□□□ 0.03
TRAF4-216ENST00000586813 RAB40BQ12829 278 aa15.24■□□□□ 0.03
TRAF4-216ENST00000586813 EBI3Q14213 229 aa15.24■□□□□ 0.03
TRAF4-216ENST00000586813 CBR4Q8N4T8 237 aa15.24■□□□□ 0.03
TRAF4-216ENST00000586813 EAF1Q96JC9 268 aaPredicted RBP15.24■□□□□ 0.03
TRAF4-216ENST00000586813 WWC2-AS2Q96NR7 200 aa15.24■□□□□ 0.03
TRAF4-216ENST00000586813 DUX3Q96PT4 197 aa15.24■□□□□ 0.03
TRAF4-216ENST00000586813 IFT22Q9H7X7 185 aa15.24■□□□□ 0.03
TRAF4-216ENST00000586813 FAM118AQ9NWS6 357 aa15.24■□□□□ 0.03
TRAF4-216ENST00000586813 ST3GAL6Q9Y274 331 aa15.24■□□□□ 0.03
TRAF4-216ENST00000586813 IGHV3-72A0A0B4J1Y9 119 aa15.23■□□□□ 0.03
TRAF4-216ENST00000586813 LINC01548A6NM66 108 aa15.23■□□□□ 0.03
TRAF4-216ENST00000586813 H0YHG0 523 aa15.23■□□□□ 0.03
TRAF4-216ENST00000586813 H3BNX3 289 aa15.23■□□□□ 0.03
TRAF4-216ENST00000586813 MPZL2O60487 215 aa15.23■□□□□ 0.03
TRAF4-216ENST00000586813 OR7C1O76099 320 aaPredicted RBP15.23■□□□□ 0.03
TRAF4-216ENST00000586813 CDRT1O95170 752 aa15.23■□□□□ 0.03
TRAF4-216ENST00000586813 GAPDHP04406 335 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 836.7 ms