RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 ZNF737O75373 536 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 CRTAPO75718 401 aaPredicted RBP12.68□□□□□ -0.38
SKA2-209ENST00000583976 GTF2F2P13984 249 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 RAB3BP20337 219 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 COX7A1P24310 79 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 CLDN12P56749 244 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 ERVFRD-1P60508 538 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 LSM3P62310 102 aaKnown RBP12.68□□□□□ -0.38
SKA2-209ENST00000583976 GPR176Q14439 515 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 P2RY14Q15391 338 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 LRRC75BQ2VPJ9 315 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 PLA1AQ53H76 456 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 HES5Q5TA89 166 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 OR10K2Q6IF99 312 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 Q6P435 159 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 Q6ZTK2 550 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 TMEM104Q8NE00 496 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 Q8NFD4 153 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 OR4S1Q8NGB4 309 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 OR51T1Q8NGJ9 327 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 OR4C13Q8NGP0 309 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 SNX22Q96L94 193 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 CENPOQ9BU64 300 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 ING3Q9NXR8 418 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 MEX3AA1L020 520 aaKnown RBP12.67□□□□□ -0.38
SKA2-209ENST00000583976 GEMIN2O14893 280 aaKnown RBP12.67□□□□□ -0.38
SKA2-209ENST00000583976 SLC22A1O15245 554 aa12.67□□□□□ -0.38
SKA2-209ENST00000583976 OPN1MWP04001 364 aa12.67□□□□□ -0.38
SKA2-209ENST00000583976 OPN1MW2P0DN77 364 aa12.67□□□□□ -0.38
SKA2-209ENST00000583976 OPN1MW3P0DN78 364 aa12.67□□□□□ -0.38
SKA2-209ENST00000583976 CCL3L1P16619 93 aa12.67□□□□□ -0.38
SKA2-209ENST00000583976 EDDM3BP56851 147 aa12.67□□□□□ -0.38
SKA2-209ENST00000583976 RBM11P57052 281 aaKnown RBP12.67□□□□□ -0.38
SKA2-209ENST00000583976 EDDM3AQ14507 147 aa12.67□□□□□ -0.38
SKA2-209ENST00000583976 HABP2Q14520 560 aaPredicted RBP12.67□□□□□ -0.38
SKA2-209ENST00000583976 GRK1Q15835 563 aa12.67□□□□□ -0.38
SKA2-209ENST00000583976 RAB11BQ15907 218 aa12.67□□□□□ -0.38
SKA2-209ENST00000583976 Q6ZPA2 131 aa12.67□□□□□ -0.38
SKA2-209ENST00000583976 GDPD3Q7L5L3 318 aa12.67□□□□□ -0.38
SKA2-209ENST00000583976 TPRX1Q8N7U7 411 aa12.67□□□□□ -0.38
SKA2-209ENST00000583976 OR6M1Q8NGM8 313 aa12.67□□□□□ -0.38
SKA2-209ENST00000583976 CFHR4Q92496 578 aa12.67□□□□□ -0.38
SKA2-209ENST00000583976 KCTD7Q96MP8 289 aa12.67□□□□□ -0.38
SKA2-209ENST00000583976 SELENOIQ9C0D9 397 aa12.67□□□□□ -0.38
SKA2-209ENST00000583976 FAM234AQ9H0X4 552 aa12.67□□□□□ -0.38
SKA2-209ENST00000583976 SEBOXQ9HB31 216 aaPredicted RBP12.67□□□□□ -0.38
SKA2-209ENST00000583976 TRBV23-1A0A0A0MS06 115 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 SLC33A1O00400 549 aaPredicted RBP12.66□□□□□ -0.38
SKA2-209ENST00000583976 SLC17A2O00624 439 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 AIREO43918 545 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 OR7C1O76099 320 aaPredicted RBP12.66□□□□□ -0.38
SKA2-209ENST00000583976 MPIG6BO95866 241 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 CLEC2LP0C7M8 214 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 VSIG10L2P0DP72 767 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 VSIG8P0DPA2 414 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 CD37P11049 281 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 MGMTP16455 207 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 LMO1P25800 156 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 SDC2P34741 201 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 TGFBR1P36897 503 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 OR3A1P47881 315 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 PSMD7P51665 324 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 MXD1Q05195 221 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 BLMHQ13867 455 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 ZNF273Q14593 569 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 IL13RA2Q14627 380 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 FAM189A2Q15884 450 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 TIMM50Q3ZCQ8 353 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 ATAD3CQ5T2N8 411 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 KPRPQ5T749 579 aaPredicted RBP12.66□□□□□ -0.38
SKA2-209ENST00000583976 ZNF782Q6ZMW2 699 aaPredicted RBP12.66□□□□□ -0.38
SKA2-209ENST00000583976 OR8H2Q8N162 312 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 OR51D1Q8NGF3 324 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 OR5D13Q8NGL4 314 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 OR13F1Q8NGS4 319 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 FUNDC2Q9BWH2 189 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 GHRLQ9UBU3 117 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 NOTCH3Q9UM47 2321 aa12.66□□□□□ -0.38
SKA2-209ENST00000583976 TFAP2AP05549 437 aa12.65□□□□□ -0.38
SKA2-209ENST00000583976 UBBP0CG47 229 aa12.65□□□□□ -0.38
SKA2-209ENST00000583976 ARSBP15848 533 aa12.65□□□□□ -0.38
SKA2-209ENST00000583976 RPL31P62899 125 aaKnown RBP12.65□□□□□ -0.38
SKA2-209ENST00000583976 AESQ08117 197 aa12.65□□□□□ -0.38
SKA2-209ENST00000583976 ATXN7L3Q14CW9 347 aaPredicted RBP12.65□□□□□ -0.38
SKA2-209ENST00000583976 NHLRC3Q5JS37 347 aa12.65□□□□□ -0.38
SKA2-209ENST00000583976 LHFPL4Q7Z7J7 247 aa12.65□□□□□ -0.38
SKA2-209ENST00000583976 NR2C2APQ86WQ0 139 aa12.65□□□□□ -0.38
SKA2-209ENST00000583976 DYNAPQ8N1N2 210 aa12.65□□□□□ -0.38
SKA2-209ENST00000583976 CHST4Q8NCG5 386 aa12.65□□□□□ -0.38
SKA2-209ENST00000583976 OR2T6Q8NHC8 308 aa12.65□□□□□ -0.38
SKA2-209ENST00000583976 CST11Q9H112 138 aa12.65□□□□□ -0.38
SKA2-209ENST00000583976 ZNF702PQ9H963 129 aa12.65□□□□□ -0.38
SKA2-209ENST00000583976 STEAP1Q9UHE8 339 aa12.65□□□□□ -0.38
SKA2-209ENST00000583976 A0A0B4J203 849 aa12.64□□□□□ -0.39
SKA2-209ENST00000583976 TRAV24A0A0B4J272 114 aa12.64□□□□□ -0.39
SKA2-209ENST00000583976 IFITM5A6NNB3 132 aa12.64□□□□□ -0.39
SKA2-209ENST00000583976 MGST3O14880 152 aa12.64□□□□□ -0.39
SKA2-209ENST00000583976 BPNT1O95861 308 aa12.64□□□□□ -0.39
SKA2-209ENST00000583976 SLC2A2P11168 524 aaPredicted RBP12.64□□□□□ -0.39
SKA2-209ENST00000583976 KIR2DS4P43632 304 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms