RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 DHRS7CA6NNS2 312 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 RTL8CO15255 209 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 CDK2AP2O75956 126 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 TTRP02766 147 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 IL3RAP26951 378 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 MECP2P51608 486 aaKnown RBP6.92□□□□□ -1.3
GGA3-212ENST00000582376 FUT6P51993 359 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 SYNJ2BPP57105 145 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 TCTAP57738 103 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 VSNL1P62760 191 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 SCN1BQ07699 218 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 SF3A3Q12874 501 aaKnown RBP eCLIP6.92□□□□□ -1.3
GGA3-212ENST00000582376 ZNF829Q3KNS6 432 aaPredicted RBP6.92□□□□□ -1.3
GGA3-212ENST00000582376 C19orf54Q5BKX5 351 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 FAHD1Q6P587 224 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 Q8N1X5 172 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 GVQW1Q8N7I0 195 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 OR10A7Q8NGE5 316 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 BORCS8Q96FH0 119 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 MS4A10Q96PG2 267 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 BARHL1Q9BZE3 327 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 CST11Q9H112 138 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 OR51V1Q9H2C8 321 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 HMG20AQ9NP66 347 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 CMTM6Q9NX76 183 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 LAMP5Q9UJQ1 280 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 GTF2A1LQ9UNN4 478 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 TP53TG1Q9Y2A0 90 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 VPS13DQ5THJ4 4388 aa6.92□□□□□ -1.3
GGA3-212ENST00000582376 DYNC1H1Q14204 4646 aaKnown RBP6.91□□□□□ -1.3
GGA3-212ENST00000582376 MEIKINA0A087WXM9 373 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 LOC102724200A0A096LPH7 203 aaPredicted RBP6.91□□□□□ -1.3
GGA3-212ENST00000582376 MSGN1A6NI15 193 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 ZNF785A8K8V0 405 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 BBIP1A8MTZ0 92 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 NPIPB11E5RHQ5 1161 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 SLC33A1O00400 549 aaPredicted RBP6.91□□□□□ -1.3
GGA3-212ENST00000582376 TXNL1O43396 289 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 SPRY2O43597 315 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 IFNA4P05014 189 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 ALOX5APP20292 161 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 CRIP2P52943 208 aaPredicted RBP6.91□□□□□ -1.3
GGA3-212ENST00000582376 LIPEQ05469 1076 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 UBE2V2Q15819 145 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 TATDN3Q17R31 274 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 CD300EQ496F6 205 aaPredicted RBP6.91□□□□□ -1.3
GGA3-212ENST00000582376 DEGS2Q6QHC5 323 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 RASSF6Q6ZTQ3 369 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 HDXQ7Z353 690 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 LINC00311Q8N616 119 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 CHST4Q8NCG5 386 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 OR2T33Q8NG76 320 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 STON2Q8WXE9 905 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 MROQ9BYG7 248 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 ANKRD60Q9BZ19 345 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 COMMD4Q9H0A8 199 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 SLA2Q9H6Q3 261 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 KIF25Q9UIL4 384 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 A3GALT2U3KPV4 340 aa6.91□□□□□ -1.3
GGA3-212ENST00000582376 A0A1B0GTI1 187 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 ANKRD34BA5PLL1 514 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 MAGEB3O15480 346 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 GATBO75879 557 aaKnown RBP6.9□□□□□ -1.3
GGA3-212ENST00000582376 NCK1P16333 377 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 CD40LGP29965 261 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 SSTR5P35346 364 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 RIDAP52758 137 aaKnown RBP6.9□□□□□ -1.3
GGA3-212ENST00000582376 NDPQ00604 133 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 TMEM267Q0VDI3 215 aaPredicted RBP6.9□□□□□ -1.3
GGA3-212ENST00000582376 RBMY1FQ15415 496 aaKnown RBP6.9□□□□□ -1.3
GGA3-212ENST00000582376 GUCA2BQ16661 112 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 LRRC36Q1X8D7 754 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 MOGAT2Q3SYC2 334 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 LIN54Q6MZP7 749 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 Q6ZSR3 168 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 ARPINQ7Z6K5 226 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 CROCCP2Q86T23 111 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 MRGPRDQ8TDS7 321 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 C2CD4CQ8TF44 421 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 ZNF251Q9BRH9 671 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 NCOR1P1Q9H4R4 102 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 IL1RAPQ9NPH3 570 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 CMC2Q9NRP2 79 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 ARMC1Q9NVT9 282 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 CNOT2Q9NZN8 540 aaKnown RBP6.9□□□□□ -1.3
GGA3-212ENST00000582376 RNF150Q9ULK6 438 aa6.9□□□□□ -1.3
GGA3-212ENST00000582376 DMBT1Q9UGM3 2413 aaPredicted RBP6.9□□□□□ -1.31
GGA3-212ENST00000582376 C13orf42A0A1B0GVH6 325 aa6.89□□□□□ -1.31
GGA3-212ENST00000582376 LOC110117498-PIK3R3F6TDL0 507 aa6.89□□□□□ -1.31
GGA3-212ENST00000582376 DEGS1O15121 323 aa6.89□□□□□ -1.31
GGA3-212ENST00000582376 NBR2O15453 112 aa6.89□□□□□ -1.31
GGA3-212ENST00000582376 ZNF254O75437 659 aa6.89□□□□□ -1.31
GGA3-212ENST00000582376 TRGV3P03979 118 aa6.89□□□□□ -1.31
GGA3-212ENST00000582376 CSTBP04080 98 aaKnown RBP6.89□□□□□ -1.31
GGA3-212ENST00000582376 RRM2P31350 389 aa6.89□□□□□ -1.31
GGA3-212ENST00000582376 HCCSP53701 268 aa6.89□□□□□ -1.31
GGA3-212ENST00000582376 ATP1B3P54709 279 aa6.89□□□□□ -1.31
GGA3-212ENST00000582376 ACTBP60709 375 aa6.89□□□□□ -1.31
GGA3-212ENST00000582376 C5orf64Q2M2E5 130 aa6.89□□□□□ -1.31
GGA3-212ENST00000582376 ACTBL2Q562R1 376 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms