RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 MMP27Q9H306 513 aa20.11■□□□□ 0.81
CDC42EP4-205ENST00000580315 Q9H521 79 aa20.11■□□□□ 0.81
CDC42EP4-205ENST00000580315 SPACA1Q9HBV2 294 aa20.11■□□□□ 0.81
CDC42EP4-205ENST00000580315 RAB18Q9NP72 206 aa20.11■□□□□ 0.81
CDC42EP4-205ENST00000580315 ABCB10Q9NRK6 738 aa20.11■□□□□ 0.81
CDC42EP4-205ENST00000580315 KBTBD11-OT1A0A1B0GTJ5 212 aa20.1■□□□□ 0.81
CDC42EP4-205ENST00000580315 A0A1W2PP11 408 aa20.1■□□□□ 0.81
CDC42EP4-205ENST00000580315 PAX6P26367 422 aa20.1■□□□□ 0.81
CDC42EP4-205ENST00000580315 MLLT11Q13015 90 aaPredicted RBP20.1■□□□□ 0.81
CDC42EP4-205ENST00000580315 TPBGQ13641 420 aa20.1■□□□□ 0.81
CDC42EP4-205ENST00000580315 FAM189A2Q15884 450 aa20.1■□□□□ 0.81
CDC42EP4-205ENST00000580315 SSX2Q16385 188 aa20.1■□□□□ 0.81
CDC42EP4-205ENST00000580315 LY6EQ16553 131 aa20.1■□□□□ 0.81
CDC42EP4-205ENST00000580315 RSBN1Q5VWQ0 802 aaPredicted RBP20.1■□□□□ 0.81
CDC42EP4-205ENST00000580315 LIAT1Q6ZQX7 453 aa20.1■□□□□ 0.81
CDC42EP4-205ENST00000580315 PLPPR1Q8TBJ4 325 aa20.1■□□□□ 0.81
CDC42EP4-205ENST00000580315 ZNF596Q8TC21 504 aa20.1■□□□□ 0.81
CDC42EP4-205ENST00000580315 NEK7Q8TDX7 302 aa20.1■□□□□ 0.81
CDC42EP4-205ENST00000580315 GHRLQ9UBU3 117 aa20.1■□□□□ 0.81
CDC42EP4-205ENST00000580315 VGLL3A8MV65 326 aa20.09■□□□□ 0.81
CDC42EP4-205ENST00000580315 TIMM23O14925 209 aa20.09■□□□□ 0.81
CDC42EP4-205ENST00000580315 PSMA1P25786 263 aaKnown RBP20.09■□□□□ 0.81
CDC42EP4-205ENST00000580315 PLA1AQ53H76 456 aa20.09■□□□□ 0.81
CDC42EP4-205ENST00000580315 GLT8D1Q68CQ7 371 aa20.09■□□□□ 0.81
CDC42EP4-205ENST00000580315 LYPD6Q86Y78 171 aa20.09■□□□□ 0.81
CDC42EP4-205ENST00000580315 OR13A1Q8NGR1 328 aa20.09■□□□□ 0.81
CDC42EP4-205ENST00000580315 TMEM203Q969S6 136 aa20.09■□□□□ 0.81
CDC42EP4-205ENST00000580315 RNF114Q9Y508 228 aa20.09■□□□□ 0.81
CDC42EP4-205ENST00000580315 TMEM30CPA0ZSE6 113 aa20.08■□□□□ 0.81
CDC42EP4-205ENST00000580315 TOR1AO14656 332 aa20.08■□□□□ 0.81
CDC42EP4-205ENST00000580315 CRTAPO75718 401 aaPredicted RBP20.08■□□□□ 0.81
CDC42EP4-205ENST00000580315 SC5DO75845 299 aa20.08■□□□□ 0.81
CDC42EP4-205ENST00000580315 SRMP19623 302 aa20.08■□□□□ 0.81
CDC42EP4-205ENST00000580315 HTR1DP28221 377 aa20.08■□□□□ 0.81
CDC42EP4-205ENST00000580315 MAP2K4P45985 399 aa20.08■□□□□ 0.81
CDC42EP4-205ENST00000580315 C17orf58Q2M2W7 97 aa20.08■□□□□ 0.81
CDC42EP4-205ENST00000580315 FAM27D1Q5T7N8 215 aa20.08■□□□□ 0.81
CDC42EP4-205ENST00000580315 SLC35E4Q6ICL7 350 aa20.08■□□□□ 0.81
CDC42EP4-205ENST00000580315 DYNAPQ8N1N2 210 aa20.08■□□□□ 0.81
CDC42EP4-205ENST00000580315 MGLLQ99685 303 aa20.08■□□□□ 0.81
CDC42EP4-205ENST00000580315 CALYQ9NYX4 217 aa20.08■□□□□ 0.81
CDC42EP4-205ENST00000580315 ZNF581Q9P0T4 197 aa20.08■□□□□ 0.81
CDC42EP4-205ENST00000580315 UCHL1P09936 223 aa20.07■□□□□ 0.8
CDC42EP4-205ENST00000580315 UBBP0CG47 229 aa20.07■□□□□ 0.8
CDC42EP4-205ENST00000580315 MGMTP16455 207 aa20.07■□□□□ 0.8
CDC42EP4-205ENST00000580315 CD34P28906 385 aa20.07■□□□□ 0.8
CDC42EP4-205ENST00000580315 RBM39Q14498 530 aaKnown RBP20.07■□□□□ 0.8
CDC42EP4-205ENST00000580315 TBCEQ15813 527 aaPredicted RBP20.07■□□□□ 0.8
CDC42EP4-205ENST00000580315 Q6ZSV7 163 aa20.07■□□□□ 0.8
CDC42EP4-205ENST00000580315 LINC01006Q8NI28 216 aa20.07■□□□□ 0.8
CDC42EP4-205ENST00000580315 MRGPRDQ8TDS7 321 aa20.07■□□□□ 0.8
CDC42EP4-205ENST00000580315 CREB3L1Q96BA8 519 aa20.07■□□□□ 0.8
CDC42EP4-205ENST00000580315 SELENOIQ9C0D9 397 aa20.07■□□□□ 0.8
CDC42EP4-205ENST00000580315 CST11Q9H112 138 aa20.07■□□□□ 0.8
CDC42EP4-205ENST00000580315 C16orf95Q9H693 158 aa20.07■□□□□ 0.8
CDC42EP4-205ENST00000580315 HILPDAQ9Y5L2 63 aa20.07■□□□□ 0.8
CDC42EP4-205ENST00000580315 FAM90A10PA6NDY2 464 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 FAM90A18PA6NE21 464 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 FAM90A16PA6NEW6 464 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 FAM90A20PA6NIJ5 464 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 FAM90A7PA6NKC0 464 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 FAM90A22PA8MWA6 464 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 FAM90A12PA8MX19 464 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 FAM90A5PA8MXJ8 464 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 FAM90A23PA8MXZ1 464 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 H3BUI4 141 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 TSPAN9O75954 239 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 IL1AP01583 271 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 FAM90A15PP0C7V4 464 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 FAM90A13PP0C7W8 464 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 FAM90A14PP0C7W9 464 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 FAM90A24PP0C7X0 464 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 CGB3P0DN86 165 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 CGB7P0DN87 165 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 CPEP16870 476 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 NFYBP25208 207 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 GDNFP39905 211 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 PRRX1P54821 245 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 GP2P55259 537 aaKnown RBP20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 LDLRAD2Q5SZI1 272 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 BAIAP2L2Q6UXY1 529 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 ZNF367Q7RTV3 350 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 LRRTM1Q86UE6 522 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 OR4P4Q8NGL7 312 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 BANF2Q9H503 90 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 DPM3Q9P2X0 92 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 PITPNC1Q9UKF7 332 aa20.06■□□□□ 0.8
CDC42EP4-205ENST00000580315 A0A087X0M5 115 aa20.05■□□□□ 0.8
CDC42EP4-205ENST00000580315 A0A1B0GX30 115 aa20.05■□□□□ 0.8
CDC42EP4-205ENST00000580315 FAM172BPA6NC97 362 aa20.05■□□□□ 0.8
CDC42EP4-205ENST00000580315 MCRIP1C9JLW8 97 aa20.05■□□□□ 0.8
CDC42EP4-205ENST00000580315 ARL6IP5O75915 188 aa20.05■□□□□ 0.8
CDC42EP4-205ENST00000580315 GZMHP20718 246 aa20.05■□□□□ 0.8
CDC42EP4-205ENST00000580315 DYNLT3P51808 116 aa20.05■□□□□ 0.8
CDC42EP4-205ENST00000580315 GABARAPL2P60520 117 aa20.05■□□□□ 0.8
CDC42EP4-205ENST00000580315 RPS25P62851 125 aaKnown RBP20.05■□□□□ 0.8
CDC42EP4-205ENST00000580315 PIFOQ8TCI5 191 aa20.05■□□□□ 0.8
CDC42EP4-205ENST00000580315 KIRREL1Q96J84 757 aa20.05■□□□□ 0.8
CDC42EP4-205ENST00000580315 LINC00574Q9H8X3 128 aa20.05■□□□□ 0.8
CDC42EP4-205ENST00000580315 ZNF286AQ9HBT8 521 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms