RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 TRAV39A0A0B4J263 110 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 A0A1W2PP11 408 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 UBE2QL1A1L167 161 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 CLPSL1A2RUU4 121 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 MAGEA13PA6NCF6 341 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 LEUTXA8MZ59 168 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 PIN1P1O15428 100 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 MMP23AO75900 390 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 MPIG6BO95866 241 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 IGHV3-7P01780 117 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 UBBP0CG47 229 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 MGMTP16455 207 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 FUT3P21217 361 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 CALRP27797 417 aaKnown RBP5.32□□□□□ -1.56
TRAF4-213ENST00000578917 HTR2CP28335 458 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 BRS3P32247 399 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 MNDAP41218 407 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 RANBP1P43487 201 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 PSMD7P51665 324 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 MLLT11Q13015 90 aaPredicted RBP5.32□□□□□ -1.56
TRAF4-213ENST00000578917 TPBGQ13641 420 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 IRF3Q14653 427 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 AANATQ16613 207 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 MPV17LQ2QL34 196 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 NHLRC3Q5JS37 347 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 NKAPLQ5M9Q1 402 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 FAM27D1Q5T7N8 215 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 MINOS1Q5TGZ0 78 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 OLFML2AQ68BL7 652 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 SLC35E4Q6ICL7 350 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 RAB12Q6IQ22 244 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 UNQ9370/PRO34162Q6UXP9 181 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 RTN4RL2Q86UN3 420 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 PRR18Q8N4B5 295 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 SVOPQ8N4V2 548 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 Q8NFD4 153 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 OR4C13Q8NGP0 309 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 OR13A1Q8NGR1 328 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 SGMS2Q8NHU3 365 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 KCNG3Q8TAE7 436 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 ARL11Q969Q4 196 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 COQ2Q96H96 371 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 ZNF747Q9BV97 191 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 MEGF9Q9H1U4 602 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 CHMP1AQ9HD42 196 aaPredicted RBP5.32□□□□□ -1.56
TRAF4-213ENST00000578917 RAB9BQ9NP90 201 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 ISYNA1Q9NPH2 558 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 ACOT13Q9NPJ3 140 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 ETAA1Q9NY74 926 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 CALYQ9NYX4 217 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 KCNIP1Q9NZI2 227 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 DPM3Q9P2X0 92 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 GHRLQ9UBU3 117 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 PITPNC1Q9UKF7 332 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 LSM2Q9Y333 95 aaKnown RBP5.32□□□□□ -1.56
TRAF4-213ENST00000578917 RNF114Q9Y508 228 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 MINOS1-NBL1R4GNA1 71 aa5.32□□□□□ -1.56
TRAF4-213ENST00000578917 CUBNO60494 3623 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 FAM90A8PA6NJQ4 464 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 AIPO00170 330 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 SDCBPO00560 298 aaPredicted RBP5.31□□□□□ -1.56
TRAF4-213ENST00000578917 PDCD5O14737 125 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 SPINT2O43291 252 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 DENRO43583 198 aaKnown RBP5.31□□□□□ -1.56
TRAF4-213ENST00000578917 NDUFA7O95182 113 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 MT-ND4P03905 459 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 UCHL1P09936 223 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 ARSBP15848 533 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 CPEP16870 476 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 PSMB9P28065 219 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 GABRA5P31644 462 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 GNG10P50151 68 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 RPS25P62851 125 aaKnown RBP5.31□□□□□ -1.56
TRAF4-213ENST00000578917 EMX1Q04741 257 aaPredicted RBP5.31□□□□□ -1.56
TRAF4-213ENST00000578917 P2RY14Q15391 338 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 RAB11BQ15907 218 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 ZNF626Q68DY1 528 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 CCDC144NLQ6NUI1 221 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 LIAT1Q6ZQX7 453 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 TCF23Q7RTU1 214 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 ZNF367Q7RTV3 350 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 TMEM219Q86XT9 240 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 TMEM104Q8NE00 496 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 OR10X1Q8NGY0 326 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 OR9G1Q8NH87 305 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 OR2T6Q8NHC8 308 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 LINC01006Q8NI28 216 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 PLPPR1Q8TBJ4 325 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 LEAP2Q969E1 77 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 RPEQ96AT9 228 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 YTHDF1Q9BYJ9 559 aaKnown RBP5.31□□□□□ -1.56
TRAF4-213ENST00000578917 NPFFR1Q9GZQ6 430 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 NCOR1P1Q9H4R4 102 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 IFT22Q9H7X7 185 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 IDI2-AS1Q9NZ38 188 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 ZNF581Q9P0T4 197 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 AK6Q9Y3D8 172 aaKnown RBP5.31□□□□□ -1.56
TRAF4-213ENST00000578917 AMMECR1Q9Y4X0 333 aaPredicted RBP5.31□□□□□ -1.56
TRAF4-213ENST00000578917 LRRC42Q9Y546 428 aa5.31□□□□□ -1.56
TRAF4-213ENST00000578917 FAM90A10PA6NDY2 464 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms